Ggra3301.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3301.t1
Unique NameGgra3301.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length224
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000851_piloncontigtig00000851_pilon:630435..631106 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3301Ggra3301Gracilaria gracilis GNS1m malegenetig00000851_pilon 630435..631106 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3301.t1.stop1Ggra3301.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000851_pilon 630435..630437 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3301.t1.CDS1Ggra3301.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000851_pilon 630435..631106 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3301.t1.exon1Ggra3301.t1.exon1Gracilaria gracilis GNS1m maleexontig00000851_pilon 630435..631106 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3301.t1.start1Ggra3301.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000851_pilon 631104..631106 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3301.t1Ggra3301.t1Gracilaria gracilis GNS1m malepolypeptidetig00000851_pilon 630435..631106 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3301.t1 ID=Ggra3301.t1|Name=Ggra3301.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=224bp
MAYDLTTLPCPKHANRSKRCTCMSRSALISSRHAAEMAAESAQMARRLAK
RERQLHRRERKLRKLEKALSDTTAQRPARREAKSSPPQQSARRRSSNKKP
AERPVSARHNVSPPSSFPDSASALASPNASFQRHASSSRLPVPHSYQPLY
NPLVPRPRPIPRSSTLPSGLRARAFANPVPPPGYGAYPVHPSRIPRAVSM
PYGMSSFARRGYPPNRGPRPLFL*
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spliced messenger RNA

>Ggra3301.t1 ID=Ggra3301.t1|Name=Ggra3301.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=672bp|location=Sequence derived from alignment at tig00000851_pilon:630435..631106- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGTACGACCTCACCACGCTGCCGTGCCCCAAGCACGCCAACCGCTC
CAAACGCTGCACCTGCATGTCTAGATCGGCACTTATCTCGTCGCGCCACG
CTGCCGAAATGGCCGCCGAATCCGCGCAGATGGCGCGCCGTCTCGCGAAG
CGCGAGCGCCAACTGCACCGCCGGGAGCGCAAGCTGCGCAAGCTGGAGAA
GGCCTTGTCCGACACCACGGCCCAGCGCCCCGCGCGCCGCGAGGCCAAGT
CGTCGCCGCCGCAGCAGTCTGCGCGTCGCCGCAGCAGCAACAAGAAGCCG
GCCGAACGTCCCGTCAGCGCGCGCCATAACGTGTCGCCGCCCAGCTCGTT
CCCGGACTCCGCGTCCGCGCTGGCGTCGCCCAACGCGTCGTTCCAGAGGC
ACGCTTCGTCCAGTCGTCTGCCGGTGCCGCACTCTTATCAGCCGTTGTAC
AACCCGCTGGTGCCGAGGCCGCGTCCCATTCCTCGCTCCAGCACACTTCC
GTCTGGCCTTCGGGCGCGCGCATTCGCTAACCCCGTGCCGCCGCCGGGGT
ACGGCGCGTATCCGGTGCACCCGTCACGCATCCCGCGTGCGGTATCTATG
CCGTATGGGATGTCGTCATTTGCCAGGCGGGGATACCCGCCGAATCGGGG
GCCGCGCCCGCTGTTCTTGTGA
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protein sequence of Ggra3301.t1

>Ggra3301.t1 ID=Ggra3301.t1|Name=Ggra3301.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=224bp
MAYDLTTLPCPKHANRSKRCTCMSRSALISSRHAAEMAAESAQMARRLAK
RERQLHRRERKLRKLEKALSDTTAQRPARREAKSSPPQQSARRRSSNKKP
AERPVSARHNVSPPSSFPDSASALASPNASFQRHASSSRLPVPHSYQPLY
NPLVPRPRPIPRSSTLPSGLRARAFANPVPPPGYGAYPVHPSRIPRAVSM
PYGMSSFARRGYPPNRGPRPLFL*
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mRNA from alignment at tig00000851_pilon:630435..631106-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3301.t1 ID=Ggra3301.t1|Name=Ggra3301.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=672bp|location=Sequence derived from alignment at tig00000851_pilon:630435..631106- (Gracilaria gracilis GNS1m male)
ATGGCGTACGACCTCACCACGCTGCCGTGCCCCAAGCACGCCAACCGCTC
CAAACGCTGCACCTGCATGTCTAGATCGGCACTTATCTCGTCGCGCCACG
CTGCCGAAATGGCCGCCGAATCCGCGCAGATGGCGCGCCGTCTCGCGAAG
CGCGAGCGCCAACTGCACCGCCGGGAGCGCAAGCTGCGCAAGCTGGAGAA
GGCCTTGTCCGACACCACGGCCCAGCGCCCCGCGCGCCGCGAGGCCAAGT
CGTCGCCGCCGCAGCAGTCTGCGCGTCGCCGCAGCAGCAACAAGAAGCCG
GCCGAACGTCCCGTCAGCGCGCGCCATAACGTGTCGCCGCCCAGCTCGTT
CCCGGACTCCGCGTCCGCGCTGGCGTCGCCCAACGCGTCGTTCCAGAGGC
ACGCTTCGTCCAGTCGTCTGCCGGTGCCGCACTCTTATCAGCCGTTGTAC
AACCCGCTGGTGCCGAGGCCGCGTCCCATTCCTCGCTCCAGCACACTTCC
GTCTGGCCTTCGGGCGCGCGCATTCGCTAACCCCGTGCCGCCGCCGGGGT
ACGGCGCGTATCCGGTGCACCCGTCACGCATCCCGCGTGCGGTATCTATG
CCGTATGGGATGTCGTCATTTGCCAGGCGGGGATACCCGCCGAATCGGGG
GCCGCGCCCGCTGTTCTTGTGA
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Coding sequence (CDS) from alignment at tig00000851_pilon:630435..631106-

>Ggra3301.t1 ID=Ggra3301.t1|Name=Ggra3301.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=672bp|location=Sequence derived from alignment at tig00000851_pilon:630435..631106- (Gracilaria gracilis GNS1m male)
ATGGCGTACGACCTCACCACGCTGCCGTGCCCCAAGCACGCCAACCGCTC
CAAACGCTGCACCTGCATGTCTAGATCGGCACTTATCTCGTCGCGCCACG
CTGCCGAAATGGCCGCCGAATCCGCGCAGATGGCGCGCCGTCTCGCGAAG
CGCGAGCGCCAACTGCACCGCCGGGAGCGCAAGCTGCGCAAGCTGGAGAA
GGCCTTGTCCGACACCACGGCCCAGCGCCCCGCGCGCCGCGAGGCCAAGT
CGTCGCCGCCGCAGCAGTCTGCGCGTCGCCGCAGCAGCAACAAGAAGCCG
GCCGAACGTCCCGTCAGCGCGCGCCATAACGTGTCGCCGCCCAGCTCGTT
CCCGGACTCCGCGTCCGCGCTGGCGTCGCCCAACGCGTCGTTCCAGAGGC
ACGCTTCGTCCAGTCGTCTGCCGGTGCCGCACTCTTATCAGCCGTTGTAC
AACCCGCTGGTGCCGAGGCCGCGTCCCATTCCTCGCTCCAGCACACTTCC
GTCTGGCCTTCGGGCGCGCGCATTCGCTAACCCCGTGCCGCCGCCGGGGT
ACGGCGCGTATCCGGTGCACCCGTCACGCATCCCGCGTGCGGTATCTATG
CCGTATGGGATGTCGTCATTTGCCAGGCGGGGATACCCGCCGAATCGGGG
GCCGCGCCCGCTGTTCTTGTGA
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