Ggra3292.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3292.t1
Unique NameGgra3292.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length537
Homology
BLAST of Ggra3292.t1 vs. uniprot
Match: A0A2V3IS94 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS94_9FLOR)

HSP 1 Score: 321 bits (822), Expect = 1.300e-100
Identity = 195/526 (37.07%), Postives = 288/526 (54.75%), Query Frame = 0
Query:    5 FQPTGISYFNSMFDRTILNVVFSGLLAFLILLEIENVADVLMYRAHNINKRSIDQYILFSRVSSLRGILQTLSGLEYSSKEIRTEPM-----HHRKRWRARLHCALDDGADNLEADRSSEKKESDDERAQGTTIVSTLVDTERSLSVTDLEESQPSAGPTELRRIGIPVRDGVPRPHVRLLGMVVPLLFRLTLLTLELLTIYFSSNISEEVKAGRSFNVRLKEGNAVIKTSQADNSPCREFIHPAKGVEHNGSVLLCIGSEHTHEF---PTENDTFLYFSFDPSQNQMEYVVGDLYGKEISVYVRMFINLIGDEGVELGPLRPDLPVDDNHSKKVIQRVMNRAISRLGFGMKIEQIEEIVDDRNVIQYKYPRTFGNTSKLAIERELLSELHTLSLDLNITKEGEEDALYVFKKDRGYFRHENPVIAIVGKNRLAQGWLVIAWVTLLIVRFVAQRFLISFDELAYLALKTVHGADISVGPLANVQKKERLSIGKFSDGRVGHIGFRAANCNQDRVENFYGCAAVWGS 522
            FQP G+S FNS F+    NV+ SG+LAFL+LLE+ENV DVL+YR ++INKRS+D Y+L+SR+SS+R + +TL G+E++S ++ T P      H+R+                     S E+  S+  R   T                  ++  P                GVP P +R   ++ PLL R TLL L+L  IY SS  + +V    +FN+ L      + + + +   CR +I   +GVE NG VLLCI SE +  F   P++N T L+F F P +N+ E++V D    E  V+V+  I+ +  E V + PLRPDL  D+  +++++++VM  A+ R    ++++ I    D    + Y Y  +     ++ +   +L EL TL LD+N T  G    +++F    GY   +   IA+V  NR+AQGW +I WV LL+ R +A R+L  F+ELAY ALK VHG  +SVGPLA  + +  + + KFSDGRVGHIGFR A+  Q  VE+F  C  V G+
Sbjct:    3 FQPRGVSVFNSAFETHFPNVLLSGVLAFLVLLELENVTDVLVYRHYSINKRSLDTYMLYSRISSIRSVFRTLGGVEWASNQVATVPKSSVPSHYRR--------------------HSGERPSSEAHRLPST------------------KDCTPR---------------GVPCPQLRYRKLLFPLLIRFTLLALQLFAIYSSSTTTRDVPVTPNFNLVLSNNTKPLPSPKGNFPSCRSWIQSTRGVEQNGDVLLCIDSEESRRFEGQPSQNTT-LHFLFSPDENRFEFIVRDHLAMESRVFVKAKISFLSGENVGVAPLRPDLTSDNGTAEELVKKVMVNALRRQRVEIRMDDIRTFTDSN--VTYNYSCSLDLCDRVKLSNAVLDELRTLKLDVNKTSTG----VWLFN-GTGYIFEDKKAIAVVSSNRVAQGWFLIIWVALLLTRLIANRWLSDFEELAYAALKKVHGERMSVGPLAVTEHRAPVFVRKFSDGRVGHIGFRPASPRQRVVESFQDCEVVLGT 467          
BLAST of Ggra3292.t1 vs. uniprot
Match: A0A2V3IGY5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGY5_9FLOR)

HSP 1 Score: 77.8 bits (190), Expect = 2.350e-14
Identity = 38/60 (63.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query:  404 LYVFKKDRGYFRHENPVIAIVGKNRLAQGWLVIAWVTLLIVRFVAQRFLISFDELAYLAL 463
            LY FK+++  FRHEN VIA+VG  RLAQGWL+IAW+ LL+VR + QRF   FDELAY A+
Sbjct:    2 LYGFKQEQENFRHENAVIAVVGGKRLAQGWLMIAWLGLLVVRLIGQRFFKVFDELAYPAV 61          
BLAST of Ggra3292.t1 vs. uniprot
Match: A0A2V3IN11 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN11_9FLOR)

HSP 1 Score: 68.9 bits (167), Expect = 9.240e-9
Identity = 37/88 (42.05%), Postives = 50/88 (56.82%), Query Frame = 0
Query:    5 FQPTGISYFNSMFDRTILNVVFSGLLAFLILLEIENVADVLMYRAHNINKRSIDQYILFSRVSSLRGILQTLSGLEYSSKEIRTEPMH 92
            F P G S FN      +LN    G    LIL  I ++ + L+Y   +I KRSID+YI+FSR+SS+RG+     G+E+ S  I T P H
Sbjct:   11 FTPKGASIFNRFAVDDLLNSFLGGAFVLLILTYITSILNSLLYPTRSIRKRSIDRYIIFSRISSMRGLYYLFKGIEWPSHLISTAPSH 98          
The following BLAST results are available for this feature:
BLAST of Ggra3292.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IS941.300e-10037.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IGY52.350e-1463.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IN119.240e-942.05Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..202
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..178
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 429..448
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 203..428
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 449..536
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38
NoneNo IPR availableTMHMMTMhelixcoord: 21..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000851_piloncontigtig00000851_pilon:482430..484040 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3292.t1Ggra3292.t1Gracilaria gracilis GNS1m malemRNAtig00000851_pilon 482430..484040 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3292.t1 ID=Ggra3292.t1|Name=Ggra3292.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=537bp
MVILFQPTGISYFNSMFDRTILNVVFSGLLAFLILLEIENVADVLMYRAH
NINKRSIDQYILFSRVSSLRGILQTLSGLEYSSKEIRTEPMHHRKRWRAR
LHCALDDGADNLEADRSSEKKESDDERAQGTTIVSTLVDTERSLSVTDLE
ESQPSAGPTELRRIGIPVRDGVPRPHVRLLGMVVPLLFRLTLLTLELLTI
YFSSNISEEVKAGRSFNVRLKEGNAVIKTSQADNSPCREFIHPAKGVEHN
GSVLLCIGSEHTHEFPTENDTFLYFSFDPSQNQMEYVVGDLYGKEISVYV
RMFINLIGDEGVELGPLRPDLPVDDNHSKKVIQRVMNRAISRLGFGMKIE
QIEEIVDDRNVIQYKYPRTFGNTSKLAIERELLSELHTLSLDLNITKEGE
EDALYVFKKDRGYFRHENPVIAIVGKNRLAQGWLVIAWVTLLIVRFVAQR
FLISFDELAYLALKTVHGADISVGPLANVQKKERLSIGKFSDGRVGHIGF
RAANCNQDRVENFYGCAAVWGSGECLRTRERLVQRR*
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