Ggra3280.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3280.t1
Unique NameGgra3280.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length471
Homology
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BLAST of Ggra3280.t1 vs. uniprot
Match: A0A2V3J660 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J660_9FLOR)

HSP 1 Score: 68.2 bits (165), Expect = 1.280e-8
Identity = 46/139 (33.09%), Postives = 74/139 (53.24%), Query Frame = 0 
Query:  301 LDIAIDRENWYKNAFDALQALTFLWVGVFGLLKLTSDDPSIIRHSVYGYQIIRGVDDIRATVRVD-MCKLALINSTQRKR-EWLTPADLCFATPKCTGDLRIPGGLPASQAGKEGLLISENVA--IYLKRGKEFWVRDG 435
            L+IA  R+N ++   D    LT L V VFGLLKL S+DP++IR+++ G++++R  +D+   V+ D    L ++ S      +WL     C+A  + +G +R   G    +  + G   SE+ A  I LKR   F +  G
Sbjct:  306 LNIA-SRDNLFERFTDMAAVLTTLLVSVFGLLKLKSEDPNVIRNTLRGFKVLRHFEDVVREVKCDDEAYLRMVLSVGAADVDWLDREGSCYALTQRSGRIRDTVGAKLGELTRAGWFFSEHSAMNIVLKRVVHFRISSG 443
The following BLAST results are available for this feature:
BLAST of Ggra3280.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6601.280e-833.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 105..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..49
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..470

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000851_piloncontigtig00000851_pilon:222625..226852 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3280.t1Ggra3280.t1Gracilaria gracilis GNS1m malemRNAtig00000851_pilon 222625..226852 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3280.t1 ID=Ggra3280.t1|Name=Ggra3280.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=471bp
MSTNSSKKRYPVRLFFAISNAAQSLEDEVNSAESVVPSETRGEHQTASDH
QFTVSRKDWRLSLRFVSEDRTKPPPLFHNALALVANKWSSNHSVFNLDNG
SDGIIERSKAAIENVEVNILSSEDECATLRENNLRPSVYELFSELQLPCL
VGILPAITNRHRRVRLVREIDIDLLMSVIVLREGETSQWQRDYLEVLGAW
DAELHSTPESLPDCFQTPLPEDVCARFWPGEPLSNLESRESESPTLLAAY
NGFRKQTVHALGHQCFGFGKQHFVRGLSSGYWWRNQNGFVAEYIGMQKEG
LDIAIDRENWYKNAFDALQALTFLWVGVFGLLKLTSDDPSIIRHSVYGYQ
IIRGVDDIRATVRVDMCKLALINSTQRKREWLTPADLCFATPKCTGDLRI
PGGLPASQAGKEGLLISENVAIYLKRGKEFWVRDGQIDKSSELTAGKLTQ
AMPPNVKVEPDFAVTGTSYC*
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