Ggra3274.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3274.t1
Unique NameGgra3274.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length129
Homology
BLAST of Ggra3274.t1 vs. uniprot
Match: A0A1G1C5Y5 (Thioredoxin domain-containing protein n=1 Tax=Lentisphaerae bacterium RIFOXYB12_FULL_65_16 TaxID=1798581 RepID=A0A1G1C5Y5_9BACT)

HSP 1 Score: 70.9 bits (172), Expect = 2.010e-12
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 0
Query:    3 VSTAPSLAPQLQAFKEKFLGSASPEMVATVSRTSAELEEANPINPLKVGDRAPDFTLPNATGKQVTLSSLLEKHSAVVM 81
            ++ AP L  +L+A KEK   S  PE VA + +  AE+     I  LKVGD+APDF+LP+A G++VTLS +L+K   V++
Sbjct:    1 MAPAPQLTEKLEALKEKNKASLPPETVAALEKAKAEILSQKDIEGLKVGDKAPDFSLPDAKGQKVTLSEVLKKGPVVLV 79          
BLAST of Ggra3274.t1 vs. uniprot
Match: K9Q0Z9 (Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Leptolyngbya sp. PCC 7376 TaxID=111781 RepID=K9Q0Z9_9CYAN)

HSP 1 Score: 65.1 bits (157), Expect = 3.090e-10
Identity = 57/220 (25.91%), Postives = 75/220 (34.09%), Query Frame = 0
Query:    1 MTVSTAPSLAPQLQAFKEKFLGSASPEMVATVSRTSAELEEANPINP-LKVGDRAPDFTLPNATGKQVTLSSLLEKHSAVVMTWMA---------------------------------------------------------------------------------------------RLPAPATYVIDKERTIKYVFADLDYTKRAEPSEVMEVLKTL 126
            M+     SL  Q+  F E F  +   E+ A ++  +AEL   + +   LKVGDR PDF LP+ATGK V LS LL+  S V+  +                                                                                                LP PATYVID    I+Y F D DYTKRAEPS+++  +  L
Sbjct:    1 MSAIALDSLQDQISQFMESFRANVPEEVQALMAEKTAELRAQHLVEKALKVGDRIPDFKLPDATGKTVKLSELLQSGSVVINFYRGGWCPYCNLELRALQQALPEFQKRGAQLVAISPETPDNSLSTQEKNELEFPVLSDVDNVVAKKLGLVFELSEALRPIYKGFGIDVATHNGNEKYELPMPATYVIDSTGIIRYAFVDEDYTKRAEPSDIIAAIAKL 220          
BLAST of Ggra3274.t1 vs. uniprot
Match: redoxin domain-containing protein n=1 Tax=Haloferula rosea TaxID=490093 RepID=UPI0019058AF7 (redoxin domain-containing protein n=1 Tax=Haloferula rosea TaxID=490093 RepID=UPI0019058AF7)

HSP 1 Score: 63.5 bits (153), Expect = 2.980e-9
Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 0
Query:    6 APSLAPQLQAFKEKFLGSASPEMVATVSRTSAELEEANPINP-LKVGDRAPDFTLPNATGKQVTLSSLLEKHSAVVMTW 83
            A SL   L+A K+ FL  A  E++A+ +R   ELEE+      LKVGDRAPDF++ N  G+ V LS  LE H  VV+TW
Sbjct:   18 AQSLNDSLEARKDAFLDQAPAELLASQNRALRELEESGIYEKVLKVGDRAPDFSIKNQDGEDVRLSERLE-HGPVVLTW 95          
BLAST of Ggra3274.t1 vs. uniprot
Match: A0A4Z0GJQ6 (AhpC/TSA family protein n=1 Tax=Sporolactobacillus shoreae TaxID=1465501 RepID=A0A4Z0GJQ6_9BACL)

HSP 1 Score: 62.0 bits (149), Expect = 4.160e-9
Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 0
Query:    8 SLAPQLQAFKEKFLGSASPEMVATVSRTSAELEEANPINPLKVGDRAPDFTLPNATGKQVTLSSLLEKHSAVV 80
            SL  ++ A+K  F  +ASPE     ++   ELEE+     L+VGD APDF+LP+ATGK VTLS  L K   ++
Sbjct:    3 SLVEEIDAYKASFKKNASPEKQRLYAQALKELEESGVAQGLRVGDLAPDFSLPDATGKTVTLSEELGKGPVIL 75          
BLAST of Ggra3274.t1 vs. uniprot
Match: A0A2Z5SB28 (AhpC-TSA domain-containing protein n=4 Tax=Geobacter sulfurreducens TaxID=35554 RepID=A0A2Z5SB28_GEOSN)

HSP 1 Score: 58.9 bits (141), Expect = 6.060e-9
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0
Query:    9 LAPQLQAFKEKFLGSASPEMVATVSRTSAELEEANPI-NPLKVGDRAPDFTLPNATGKQVTLSSLLEKHSAVV 80
            L  +L   +E +L   SPE  AT+ RT+ EL  +  + +   +GDRA DFTLPNA G+Q+ LS +  + +AVV
Sbjct:   12 LQKELDTLREDYLAGMSPEHAATLQRTATELVLSGIVEHAATIGDRAQDFTLPNAVGRQIRLSEVTAQSTAVV 84          
BLAST of Ggra3274.t1 vs. uniprot
Match: A0A437MZR4 (AhpC/TSA family protein n=2 Tax=Mucilaginibacter TaxID=423349 RepID=A0A437MZR4_9SPHI)

HSP 1 Score: 60.8 bits (146), Expect = 1.160e-8
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   87 LPAPATYVIDKERTIKYVFADLDYTKRAEPSEVMEVLKTL 126
            LP PATYVI  +R IKY F D DY KRAEP+E++EVLK+L
Sbjct:  180 LPVPATYVIGADRVIKYAFVDTDYRKRAEPAEILEVLKSL 219          
BLAST of Ggra3274.t1 vs. uniprot
Match: A0A7L9BUC2 (DUF3179 domain-containing protein n=1 Tax=Planctomycetia bacterium TaxID=2052181 RepID=A0A7L9BUC2_9BACT)

HSP 1 Score: 61.6 bits (148), Expect = 1.560e-8
Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 0
Query:   57 FTLPNATGKQVTLSSLLEKHSAVVMTWMARLPAPATYVIDKERTIKYVFADLDYTKRAEPSEVMEVLKTL 126
            F +  AT  +     +    S V  TW   LPAPAT+VIDK+  I+Y FAD DYTKRA+P EV+  +++L
Sbjct:  457 FVVDEATKAKYEKFGMKVAESNVSGTW--ELPAPATFVIDKDGVIRYAFADWDYTKRADPDEVIAAVRSL 524          
BLAST of Ggra3274.t1 vs. uniprot
Match: A0A1Y0CI97 (Alkyl hydroperoxide reductase n=10 Tax=Bacillaceae TaxID=186817 RepID=A0A1Y0CI97_9BACI)

HSP 1 Score: 59.7 bits (143), Expect = 2.940e-8
Identity = 30/73 (41.10%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    8 SLAPQLQAFKEKFLGSASPEMVATVSRTSAELEEANPINPLKVGDRAPDFTLPNATGKQVTLSSLLEKHSAVV 80
            +L  +++A+KE F   AS E    +++ + ELEE+     LK G+R PDFTLP+ATGK V++   LEK   ++
Sbjct:    3 TLLEEIKAYKEVFKQKASEEKQRLMAQATKELEESGVAKGLKEGERVPDFTLPDATGKMVSMKEELEKGPLIL 75          
BLAST of Ggra3274.t1 vs. uniprot
Match: L0R9J9 (Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Maridesulfovibrio hydrothermalis AM13 = DSM 14728 TaxID=1121451 RepID=L0R9J9_9DELT)

HSP 1 Score: 56.2 bits (134), Expect = 3.440e-8
Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 0
Query:   87 LPAPATYVIDKERTIKYVFADLDYTKRAEPSEVMEVLKTLA 127
            LP PATYVI K+  + Y FAD DYTKR EPSE+++ LK++A
Sbjct:   23 LPLPATYVIGKDGNVVYHFADADYTKRLEPSEIVKALKSIA 63          
BLAST of Ggra3274.t1 vs. uniprot
Match: AhpC/TSA family protein n=1 Tax=Roseibacillus ishigakijimensis TaxID=454146 RepID=UPI001903C111 (AhpC/TSA family protein n=1 Tax=Roseibacillus ishigakijimensis TaxID=454146 RepID=UPI001903C111)

HSP 1 Score: 59.7 bits (143), Expect = 3.710e-8
Identity = 34/80 (42.50%), Postives = 50/80 (62.50%), Query Frame = 0
Query:    5 TAPSLAPQLQAFKEKFLGSASPEMVATVSRTSAELEEANPI-NPLKVGDRAPDFTLPNATGKQVTLSSLLEKHSAVVMTW 83
            +A  L  +L A K  F  +AS E ++  ++    ++++  +   L VGD+APDFTLPNA GK+VTLS LL K   V++TW
Sbjct:   18 SAEDLQDELDARKANFEKTASAEKISEYNKGVEAVKQSGILAKALNVGDQAPDFTLPNAVGKEVTLSELL-KDGPVILTW 96          
The following BLAST results are available for this feature:
BLAST of Ggra3274.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1G1C5Y52.010e-1245.57Thioredoxin domain-containing protein n=1 Tax=Lent... [more]
K9Q0Z93.090e-1025.91Alkyl hydroperoxide reductase/ Thiol specific anti... [more]
redoxin domain-containing protein n=1 Tax=Haloferula rosea TaxID=490093 RepID=UPI0019058AF72.980e-948.10redoxin domain-containing protein n=1 Tax=Haloferu... [more]
A0A4Z0GJQ64.160e-945.21AhpC/TSA family protein n=1 Tax=Sporolactobacillus... [more]
A0A2Z5SB286.060e-942.47AhpC-TSA domain-containing protein n=4 Tax=Geobact... [more]
A0A437MZR41.160e-867.50AhpC/TSA family protein n=2 Tax=Mucilaginibacter T... [more]
A0A7L9BUC21.560e-845.71DUF3179 domain-containing protein n=1 Tax=Planctom... [more]
A0A1Y0CI972.940e-841.10Alkyl hydroperoxide reductase n=10 Tax=Bacillaceae... [more]
L0R9J93.440e-860.98Alkyl hydroperoxide reductase/ Thiol specific anti... [more]
AhpC/TSA family protein n=1 Tax=Roseibacillus ishigakijimensis TaxID=454146 RepID=UPI001903C1113.710e-842.50AhpC/TSA family protein n=1 Tax=Roseibacillus ishi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 84..127
e-value: 1.4E-6
score: 29.8
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 28..83
e-value: 1.2E-8
score: 36.5
NoneNo IPR availablePANTHERPTHR42801THIOREDOXIN-DEPENDENT PEROXIDE REDUCTASEcoord: 8..81
NoneNo IPR availablePANTHERPTHR42801THIOREDOXIN-DEPENDENT PEROXIDE REDUCTASEcoord: 85..126
NoneNo IPR availablePANTHERPTHR42801:SF7SLL1159 PROTEINcoord: 8..81
NoneNo IPR availablePANTHERPTHR42801:SF7SLL1159 PROTEINcoord: 85..126
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 50..83
e-value: 2.7E-5
score: 24.1
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 46..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000851_piloncontigtig00000851_pilon:191715..192392 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3274.t1Ggra3274.t1Gracilaria gracilis GNS1m malemRNAtig00000851_pilon 191715..192392 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3274.t1 ID=Ggra3274.t1|Name=Ggra3274.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=129bp
MTVSTAPSLAPQLQAFKEKFLGSASPEMVATVSRTSAELEEANPINPLKV
GDRAPDFTLPNATGKQVTLSSLLEKHSAVVMTWMARLPAPATYVIDKERT
IKYVFADLDYTKRAEPSEVMEVLKTLAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000866AhpC/TSA
IPR036249Thioredoxin-like_sf