Ggra3273.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3273.t1
Unique NameGgra3273.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length176
Homology
BLAST of Ggra3273.t1 vs. uniprot
Match: A0A2V3IQ34 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ34_9FLOR)

HSP 1 Score: 162 bits (409), Expect = 9.790e-48
Identity = 87/167 (52.10%), Postives = 112/167 (67.07%), Query Frame = 0
Query:   10 FVALLFSAYASGMPSPDACAVAFSECAFRFSGSNMLQAFPL-GVADMPFTPQIVSRTPGERIGILNSNGVEPQFINSAGVATDITDFGNG-FTPTQFKPFAIPERIGSGIGHETFQGNKALASGQCVRVFFTSFQKLVSFGPPVVTTNINLTPQEAVRMKICVVFRT 174
            F  L+ SAYASG+   D C  AF++C FRF GS+ LQ F + G AD+ FT QIVS+ P   IG+ NSNG+ P+ + +  +   +T   NG  TPTQFKPF I  R+GSG+GHE FQG   +  G+CVRV+ TS+Q L S  PPV+  N+NL+P +AVR K CVVFRT
Sbjct:   10 FALLVSSAYASGL---DFCTRAFNDCKFRFEGSSTLQTFSITGPADVAFTTQIVSKDPRMPIGVANSNGITPEILRNPNIVIPVTSIPNGHLTPTQFKPFTIKYRVGSGVGHEVFQG--LVPKGECVRVYLTSYQVLASENPPVIN-NVNLSPMQAVRGKKCVVFRT 170          
BLAST of Ggra3273.t1 vs. uniprot
Match: A0A2V3ID41 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID41_9FLOR)

HSP 1 Score: 145 bits (365), Expect = 4.930e-41
Identity = 83/175 (47.43%), Postives = 107/175 (61.14%), Query Frame = 0
Query:    1 MKTILQLKLFVALLFSAYASGMPSPDACAVAFSECAFRFSGSNMLQAFPL-GVADMPFTPQIVSRTPGERIGILNSNGVEPQFINSAGVATDITDFGNGFTPTQFKPFAIPERIGSGIGHETFQGNKALASGQCVRVFFTSFQKLVSFGPPVVTTNINLTPQEAVRMKICVVFRT 174
            MK +L+L      L  AYA+    PD C +A+ +C  +F G + + +F L G AD  FTPQIVSR PGERIG++ SNG+ PQFI S         +    + T FKP+ +P RIGSGIGHE F GN   A G C+RV+ T++Q LV+  PP V  NINL  +EA+    CVVFRT
Sbjct:    1 MKLLLKLIALTVSLSVAYATSFGMPDWCQLAYDDCKLKFEGHDNVPSFSLDGPADESFTPQIVSRNPGERIGVVTSNGIPPQFILSGYNVRPFNFYYRVPSLTLFKPYTLPHRIGSGIGHEHFDGN--FARGSCIRVYITNYQLLVAENPPSVR-NINLNRREALDQGKCVVFRT 172          
BLAST of Ggra3273.t1 vs. uniprot
Match: A0A2V3IEB5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEB5_9FLOR)

HSP 1 Score: 140 bits (353), Expect = 3.030e-39
Identity = 88/172 (51.16%), Postives = 108/172 (62.79%), Query Frame = 0
Query:    9 LFVALLFSAYASGMPSPDACAVAFSECAFRFSGSNMLQAFPLG--VADMPFTPQIVSRTPGERIGILNSNGVEPQFINS--AGV-ATDITDFGNGFTPTQFKPFAIPERIGSGIGHETFQGNKALASGQCVRVFFTSFQKLVSFGPPVVTTNINLTPQEAVRMKICVVFRTT 175
            L V L  +A   G+P PD C   F +C  RF+G   L  FPL   V ++ FTP IV   PGE+IGI+NSNGV PQFI S  +G+ AT++T F  G TPTQFKPF I     SG+GHETFQG  ++A  +CVRV+FTS Q L      VV  N   TP+EAV   +CVVFRT+
Sbjct:    9 LLVLLAAAARCQGVP-PDFCVSFFDDCVLRFAGQAALATFPLAATVDNVAFTPAIVF--PGEQIGIVNSNGVIPQFIESKPSGITATNVTAF--GLTPTQFKPFTIVNTTTSGVGHETFQGAVSVAQRRCVRVYFTSGQILQG---GVVVDNAQFTPEEAVAENVCVVFRTS 172          
BLAST of Ggra3273.t1 vs. uniprot
Match: A0A2V3J5W6 (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W6_9FLOR)

HSP 1 Score: 128 bits (322), Expect = 1.170e-31
Identity = 75/156 (48.08%), Postives = 97/156 (62.18%), Query Frame = 0
Query:   23 PSPDACAVAFSECAFRFSGSNMLQAFPLGV-ADMPFTPQIVSRTPGERIGILNSNGVEPQFINSAGVATDITDFGN--GFTPTQFKPFAIPERIGSGIGHETFQGNKAL-ASGQCVRVFFTSFQKLVSFGPPVVTTNINLTPQEAVRMKICVVFRT 174
            P+ DAC  A+ +C F F  + ++  F LG   D PFTP+IVSR PG  +G+LN+NG+ P+FI S G    IT       F PTQFKP +IP+ IGSG+G++TFQGN+ + A  +CVR+FFTSFQ L    P  V  NIN    +      CVVFRT
Sbjct:  373 PTLDACEQAYQDCDFAFFDTPVVPTFTLGGNPDKPFTPRIVSRIPGVVVGVLNTNGIIPEFIESDGSVDLITSTPAIPMFAPTQFKPLSIPDDIGSGVGYQTFQGNQLVEARNRCVRLFFTSFQLLEPTPPFSVIANINADRTD----NKCVVFRT 524          
BLAST of Ggra3273.t1 vs. uniprot
Match: A0A2V3IQI6 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQI6_9FLOR)

HSP 1 Score: 110 bits (275), Expect = 9.080e-26
Identity = 66/164 (40.24%), Postives = 94/164 (57.32%), Query Frame = 0
Query:   16 SAYASGMPSPDACAVAFSECAFRFSGSNMLQAFPLGVADMP---FTPQIVSRTPGERIGILNSNGVEPQFINSAGVATDITDFGNG-FTPTQFKPFAIPERIGSGIGHETFQGNKA-LASGQCVRVFFTSFQKLVSFGPPVVTTNINLTPQEAVRMKICVVFRT 174
            +A  + +P    C  A+ +C F+FSG N        +A  P   FTP++V +     +G LN+N V P+FI        IT+FG+  FTPT FKP+ I E  GSG+GH+TFQGN+  +A+ +CVRV+FTSFQ++   G  V   N+  +  +      CVVFRT
Sbjct:  202 NAICNIIPEKTECEKAYDKCLFKFSGVNGFNNAIFSIAGEPDKSFTPRVVPKATTYSLGTLNTNNVVPEFIEG-NQGRPITEFGSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLEVANDKCVRVYFTSFQEVPPNGQVVNRNNVPTSENK------CVVFRT 358          
BLAST of Ggra3273.t1 vs. uniprot
Match: A0A2V3IGH1 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGH1_9FLOR)

HSP 1 Score: 108 bits (269), Expect = 6.760e-25
Identity = 64/152 (42.11%), Postives = 91/152 (59.87%), Query Frame = 0
Query:   28 CAVAFSECAFRFSGSNMLQAFPLGVADMP---FTPQIVSRTPGERIGILNSNGVEPQFINSAGVATDITDFGNG-FTPTQFKPFAIPERIGSGIGHETFQGNKA-LASGQCVRVFFTSFQKLVSFGPPVVTTNINLTPQEAVRMKICVVFRT 174
            C  A+++C F+FSG +        +A  P    TPQ+V +     +G LN+N V P+FI    V+  IT+FG+  FTPT FKP+ I E  GSG+GH+TFQGN+  LA+ +CVR++FTSFQ++   G  V   N+  +  +      CVVFRT
Sbjct:  215 CEKAYNKCLFKFSGIDDFNNAIFSIAGEPDKSMTPQVVPKATTYSLGTLNTNNVVPEFIEENQVSL-ITEFGSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLELANDKCVRLYFTSFQEISQNGQVVNRNNVPTSEHK------CVVFRT 359          
BLAST of Ggra3273.t1 vs. uniprot
Match: A0A2V3J0X3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0X3_9FLOR)

HSP 1 Score: 75.1 bits (183), Expect = 9.090e-14
Identity = 49/148 (33.11%), Postives = 81/148 (54.73%), Query Frame = 0
Query:    5 LQLKLFVALLFSAYASGMPSPD----ACAVAFSECAFRFSGSNMLQAFPLGV-ADMPFTPQIVSRTPGERIGILNSNGVEPQFINSAGVATDITDFGNGFTPTQFKPFAIPERIGSGIGHETFQGNKA-LASGQCVRVFFTSFQKLVS 146
            L + L V +L S  A+  P+      AC  A+S+C + F   + L  + +   AD  FTP IVS+    ++ ++NSN    +F+   G+   + +    F  + FKPF      GS + HE + GN+  +ASG+C+RV+F+S+Q+LV+
Sbjct:    5 LPVALAVLMLMSGVAAQGPALTPFYPACVEAYSKCDWTFYNVSSLPTYNISAPADTAFTPLIVSKNKSVKLTVVNSNNAFTEFVYKEGLLPSVYEGKPRFRISTFKPFQGIN--GSRLAHERYTGNQERVASGRCLRVYFSSYQQLVT 150          
The following BLAST results are available for this feature:
BLAST of Ggra3273.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IQ349.790e-4852.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID414.930e-4147.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEB53.030e-3951.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5W61.170e-3148.08Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis... [more]
A0A2V3IQI69.080e-2640.24VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IGH16.760e-2542.11VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3J0X39.090e-1433.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..175
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000851_piloncontigtig00000851_pilon:190045..190572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3273.t1Ggra3273.t1Gracilaria gracilis GNS1m malemRNAtig00000851_pilon 190045..190572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3273.t1 ID=Ggra3273.t1|Name=Ggra3273.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=176bp
MKTILQLKLFVALLFSAYASGMPSPDACAVAFSECAFRFSGSNMLQAFPL
GVADMPFTPQIVSRTPGERIGILNSNGVEPQFINSAGVATDITDFGNGFT
PTQFKPFAIPERIGSGIGHETFQGNKALASGQCVRVFFTSFQKLVSFGPP
VVTTNINLTPQEAVRMKICVVFRTT*
back to top