Ggra326.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra326.t1
Unique NameGgra326.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length374
Homology
BLAST of Ggra326.t1 vs. uniprot
Match: A0A2V3IEY8 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEY8_9FLOR)

HSP 1 Score: 277 bits (709), Expect = 1.380e-85
Identity = 140/231 (60.61%), Postives = 174/231 (75.32%), Query Frame = 0
Query:    1 MITQYDLDNGLELQSYHGGLPGFVNSWMSAFVTYIVIASGGQNPLTISEIDIPSDDELEAILENAAMTGTVQFESLRGRRTASLGTPVVCLISKSAAFVRFHVKVIHPIILSLNHEKHSTGTSRPLLISAETGTRLLSWQVSYEFRKFAAQNCRGMSSVSLTSLKNSAMNLFVQRFREKKLLEGHSEAQFLDVLARHLNTTSKQVKQWIGVCGSAEHEAVATELVRGFEML 231
            MI QY+ ++G + +     L  FV+ W   FV Y+VI SGGQNPLTISE+++P D+ELE ILENAA  G+VQFESLRGRR A+LG P+V L +KSA F+RF VKVI PII SL HE   TGTSRPLL+S  +G R+  WQVSYEF K+A Q C  MSSVSL+SLK SAM++F++ FRE +L  GH+E Q LDVLARHLNTTS QVK+ +GV GSAE++A+A+EL R  E +
Sbjct:  282 MIAQYNSESGRDPEYSSLALANFVSKWTCTFVAYVVIGSGGQNPLTISEMEVPGDEELEGILENAATAGSVQFESLRGRRAAALGLPMVSLTAKSARFIRFQVKVILPIISSLTHEVQLTGTSRPLLVSTRSGMRMRPWQVSYEFHKYADQRCPEMSSVSLSSLKRSAMSVFLKGFRENELFHGHTEGQVLDVLARHLNTTSTQVKKCVGVRGSAEYKAIASELARCLEKI 512          
BLAST of Ggra326.t1 vs. uniprot
Match: A0A2V3ID73 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID73_9FLOR)

HSP 1 Score: 194 bits (492), Expect = 8.020e-57
Identity = 97/162 (59.88%), Postives = 119/162 (73.46%), Query Frame = 0
Query:    1 MITQYDLDNGLELQSYHGGLPGFVNSWMSAFVTYIVIASGGQNPLTISEIDIPSDDELEAILENAAMTGTVQFESLRGRRTASLGTPVVCLISKSAAFVRFHVKVIHPIILSLNHEKHSTGTSRPLLISAETGTRLLSWQVSYEFRKFAAQNCRGMSSVSLT 162
            MI QY+ ++G + +     L  FV+ W   FV Y+VI SGGQNPLTISE+++P D+ELE ILENAA  G+VQFESLRGRR A+LG P+V L +KSA F+RF VKVI PII SL HE   TGTSRPLL+S  +G R++ WQVSY+F K A Q C  MSSVSL+
Sbjct:   57 MIAQYNSESGRDPEYSSLALANFVSKWTCTFVAYVVIGSGGQNPLTISEMEVPGDEELEGILENAATAGSVQFESLRGRRAAALGLPMVSLTAKSARFIRFQVKVILPIISSLTHEVQLTGTSRPLLVSTRSGMRMMPWQVSYKFHKCADQRCPEMSSVSLS 218          
BLAST of Ggra326.t1 vs. uniprot
Match: A0A2V3IG72 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG72_9FLOR)

HSP 1 Score: 163 bits (413), Expect = 4.090e-44
Identity = 96/231 (41.56%), Postives = 129/231 (55.84%), Query Frame = 0
Query:    1 MITQYDLDNGLELQSYHGGLPGFVNSWMSAFVTYIVIASGGQNPLTISEIDIPSDDELEAILENAAMTGTVQFESLRGRRTASLGTPVVCLISKSAAFVRFHVKVIHPIILSLNHEKHSTGTSRPLLISAETGTRLLSWQVSYEFRKFAAQNCRGMSSVSLTSLKNSAMNLFVQRFREKKLLEGHSEAQFLDVLARHLNTTSKQVKQWIGVCGSAEHEAVATELVRGFEML 231
            MI QY+ ++G + +     L  FV+ W   FV Y+VI SGGQNPLTISE+++P D+ELE ILENAA  G+VQFESLRGRR A+LG P                         ++ E+++      +L  ++     +S  V + F KF    C                  F++ FRE +L  GH+E Q LDVLARHLNTTS QVK+ +GV GSAEH+A+A+EL R  E +
Sbjct:  107 MIAQYNSESGRDPEYSSLALANFVSKWTCTFVAYVVIGSGGQNPLTISEMEVPGDEELEGILENAATAGSVQFESLRGRRAAALGLP-------------------------MHEERYAYEAMACILRISQVRRSEVSRNV-FCFPKFVKTQCN---------------ERFLKGFRENELFHGHTEGQVLDVLARHLNTTSTQVKKCVGVRGSAEHKAIASELARCLEKI 296          
BLAST of Ggra326.t1 vs. uniprot
Match: A0A2V3J1Z5 (DNA repair and recombination protein RAD54B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Z5_9FLOR)

HSP 1 Score: 130 bits (328), Expect = 1.430e-29
Identity = 77/151 (50.99%), Postives = 104/151 (68.87%), Query Frame = 0
Query:  223 ELVRGFEMLTADKITTDDEDEFDIDRKELAKHEN--LLKRFGEYQRLVESESVEVENLVMCDEDETLNTALNADLSTHGIVSYLYTKKCGSQYGEE------NNGSRAKYELKKHDGRPSGSLKRKLPKLFESDSEKSSDSDVDKALAKVN 365
            +++   ++LT     +DD  EFD D+K   + +N  LLKRF +Y+R++E ESVEVENLVMC+ED+ LNTALNADLSTHG+VSYLYT K G+++  E      +N  R  Y+L +         KRKLPKLF+S+SE SSD DV+KA+A +N
Sbjct:  686 QVLENSQLLTKKDDRSDDNHEFD-DKKRKPREDNTSLLKRFSQYRRIIEEESVEVENLVMCEEDDVLNTALNADLSTHGLVSYLYTNKSGNRHENELRNDIFDNDER--YKLGERGMDTGVGTKRKLPKLFDSESEASSDEDVEKAMAMLN 833          
BLAST of Ggra326.t1 vs. uniprot
Match: A0A2V3IC55 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC55_9FLOR)

HSP 1 Score: 58.5 bits (140), Expect = 1.970e-7
Identity = 26/39 (66.67%), Postives = 33/39 (84.62%), Query Frame = 0
Query:   50 IDIPSDDELEAILENAAMTGTVQFESLRGRRTASLGTPV 88
            +++P D+ELE ILENAA  G+VQFESLRGRR A+LG P+
Sbjct:    1 MEVPGDEELEGILENAATAGSVQFESLRGRRAAALGLPM 39          
The following BLAST results are available for this feature:
BLAST of Ggra326.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IEY81.380e-8560.61Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3ID738.020e-5759.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IG724.090e-4441.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1Z51.430e-2950.99DNA repair and recombination protein RAD54B n=1 Ta... [more]
A0A2V3IC551.970e-766.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000209_piloncontigtig00000209_pilon:82145..84621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra326.t1Ggra326.t1Gracilaria gracilis GNS1m malemRNAtig00000209_pilon 82145..84621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra326.t1 ID=Ggra326.t1|Name=Ggra326.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=374bp
MITQYDLDNGLELQSYHGGLPGFVNSWMSAFVTYIVIASGGQNPLTISEI
DIPSDDELEAILENAAMTGTVQFESLRGRRTASLGTPVVCLISKSAAFVR
FHVKVIHPIILSLNHEKHSTGTSRPLLISAETGTRLLSWQVSYEFRKFAA
QNCRGMSSVSLTSLKNSAMNLFVQRFREKKLLEGHSEAQFLDVLARHLNT
TSKQVKQWIGVCGSAEHEAVATELVRGFEMLTADKITTDDEDEFDIDRKE
LAKHENLLKRFGEYQRLVESESVEVENLVMCDEDETLNTALNADLSTHGI
VSYLYTKKCGSQYGEENNGSRAKYELKKHDGRPSGSLKRKLPKLFESDSE
KSSDSDVDKALAKVNAAKSGTKL*
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