Ggra326.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra326.t1
Unique NameGgra326.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length374
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000209_piloncontigtig00000209_pilon:82145..84621 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra326Ggra326Gracilaria gracilis GNS1m malegenetig00000209_pilon 82145..84621 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra326.t1Ggra326.t1Gracilaria gracilis GNS1m malepolypeptidetig00000209_pilon 82145..84621 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra326.t1.start1Ggra326.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000209_pilon 82145..82147 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra326.t1.CDS1Ggra326.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000209_pilon 82145..82834 +
Ggra326.t1.CDS2Ggra326.t1.CDS2Gracilaria gracilis GNS1m maleCDStig00000209_pilon 84190..84621 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra326.t1.exon1Ggra326.t1.exon1Gracilaria gracilis GNS1m maleexontig00000209_pilon 82145..82834 +
Ggra326.t1.exon2Ggra326.t1.exon2Gracilaria gracilis GNS1m maleexontig00000209_pilon 84190..84621 +


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra326.t1.intron1Ggra326.t1.intron1Gracilaria gracilis GNS1m maleintrontig00000209_pilon 82835..84189 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra326.t1.stop1Ggra326.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000209_pilon 84619..84621 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra326.t1 ID=Ggra326.t1|Name=Ggra326.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=374bp
MITQYDLDNGLELQSYHGGLPGFVNSWMSAFVTYIVIASGGQNPLTISEI
DIPSDDELEAILENAAMTGTVQFESLRGRRTASLGTPVVCLISKSAAFVR
FHVKVIHPIILSLNHEKHSTGTSRPLLISAETGTRLLSWQVSYEFRKFAA
QNCRGMSSVSLTSLKNSAMNLFVQRFREKKLLEGHSEAQFLDVLARHLNT
TSKQVKQWIGVCGSAEHEAVATELVRGFEMLTADKITTDDEDEFDIDRKE
LAKHENLLKRFGEYQRLVESESVEVENLVMCDEDETLNTALNADLSTHGI
VSYLYTKKCGSQYGEENNGSRAKYELKKHDGRPSGSLKRKLPKLFESDSE
KSSDSDVDKALAKVNAAKSGTKL*
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spliced messenger RNA

>Ggra326.t1 ID=Ggra326.t1|Name=Ggra326.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1122bp|location=Sequence derived from alignment at tig00000209_pilon:82145..84621+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATTACCCAGTACGATCTGGACAATGGACTTGAACTTCAATCATATCA
TGGTGGACTGCCTGGCTTTGTAAACAGCTGGATGTCTGCGTTCGTGACAT
ATATAGTCATAGCGTCAGGTGGACAGAACCCTCTCACAATTTCAGAAATA
GACATCCCGAGTGACGACGAATTGGAAGCGATTCTTGAAAACGCTGCGAT
GACTGGAACCGTACAATTTGAATCCCTCCGGGGAAGACGAACAGCCTCTC
TAGGAACTCCAGTGGTGTGTTTAATTTCCAAGTCAGCGGCTTTCGTTCGA
TTTCACGTGAAAGTGATACATCCAATTATACTCTCGTTGAATCATGAAAA
GCATTCGACTGGGACGTCCAGACCGTTGCTAATCAGTGCGGAGACCGGTA
CACGTTTGCTGTCTTGGCAAGTCTCTTACGAGTTTCGCAAGTTTGCCGCT
CAGAATTGTCGTGGCATGTCTTCCGTCAGCCTGACTTCGTTGAAAAACAG
TGCTATGAACTTGTTTGTGCAGAGATTTCGTGAAAAGAAACTTCTTGAAG
GTCACTCTGAGGCGCAATTTCTCGATGTGCTCGCTCGACATCTGAACACC
ACATCAAAGCAAGTGAAGCAATGGATTGGGGTTTGTGGGTCTGCCGAGCA
CGAAGCTGTAGCTACGGAGCTGGTCAGAGGTTTTGAAATGCTCACGGCTG
ACAAGATAACGACTGATGACGAAGATGAATTTGACATAGATCGAAAGGAG
CTGGCGAAGCACGAAAACCTCTTGAAACGCTTTGGGGAGTATCAACGACT
TGTCGAAAGTGAGTCGGTTGAGGTTGAAAATCTGGTTATGTGTGACGAAG
ATGAGACCTTGAACACCGCGTTAAATGCGGATTTGAGCACACATGGCATC
GTCTCATACCTGTACACCAAGAAGTGTGGTAGCCAGTACGGGGAAGAAAA
CAATGGTTCCCGTGCGAAGTACGAACTTAAGAAACACGATGGAAGACCGA
GCGGCAGCCTGAAAAGAAAGCTCCCAAAGCTCTTTGAAAGCGATTCTGAG
AAAAGCAGTGATAGTGACGTTGATAAGGCTTTAGCCAAAGTGAACGCGGC
GAAGAGTGGGACGAAGCTTTGA
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protein sequence of Ggra326.t1

>Ggra326.t1 ID=Ggra326.t1|Name=Ggra326.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=374bp
MITQYDLDNGLELQSYHGGLPGFVNSWMSAFVTYIVIASGGQNPLTISEI
DIPSDDELEAILENAAMTGTVQFESLRGRRTASLGTPVVCLISKSAAFVR
FHVKVIHPIILSLNHEKHSTGTSRPLLISAETGTRLLSWQVSYEFRKFAA
QNCRGMSSVSLTSLKNSAMNLFVQRFREKKLLEGHSEAQFLDVLARHLNT
TSKQVKQWIGVCGSAEHEAVATELVRGFEMLTADKITTDDEDEFDIDRKE
LAKHENLLKRFGEYQRLVESESVEVENLVMCDEDETLNTALNADLSTHGI
VSYLYTKKCGSQYGEENNGSRAKYELKKHDGRPSGSLKRKLPKLFESDSE
KSSDSDVDKALAKVNAAKSGTKL*
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mRNA from alignment at tig00000209_pilon:82145..84621+

Legend: polypeptidestart_codonCDSexonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra326.t1 ID=Ggra326.t1|Name=Ggra326.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2477bp|location=Sequence derived from alignment at tig00000209_pilon:82145..84621+ (Gracilaria gracilis GNS1m male)
ATGATTACCCAGTACGATCTGGACAATGGACTTGAACTTCAATCATATCA
TGGTGGACTGCCTGGCTTTGTAAACAGCTGGATGTCTGCGTTCGTGACAT
ATATAGTCATAGCGTCAGGTGGACAGAACCCTCTCACAATTTCAGAAATA
GACATCCCGAGTGACGACGAATTGGAAGCGATTCTTGAAAACGCTGCGAT
GACTGGAACCGTACAATTTGAATCCCTCCGGGGAAGACGAACAGCCTCTC
TAGGAACTCCAGTGGTGTGTTTAATTTCCAAGTCAGCGGCTTTCGTTCGA
TTTCACGTGAAAGTGATACATCCAATTATACTCTCGTTGAATCATGAAAA
GCATTCGACTGGGACGTCCAGACCGTTGCTAATCAGTGCGGAGACCGGTA
CACGTTTGCTGTCTTGGCAAGTCTCTTACGAGTTTCGCAAGTTTGCCGCT
CAGAATTGTCGTGGCATGTCTTCCGTCAGCCTGACTTCGTTGAAAAACAG
TGCTATGAACTTGTTTGTGCAGAGATTTCGTGAAAAGAAACTTCTTGAAG
GTCACTCTGAGGCGCAATTTCTCGATGTGCTCGCTCGACATCTGAACACC
ACATCAAAGCAAGTGAAGCAATGGATTGGGGTTTGTGGGTCTGCCGAGCA
CGAAGCTGTAGCTACGGAGCTGGTCAGAGGTTTTGAAATGGTCTGAAAAA
TTATACGTAATCCATTGCGGTTTGGCGGAATCTTAAAGGGAGCCACAGTT
TAATCGACGTGCGACTTTATGACTGACTGCTTCAACGTTTCGAGTTGTCT
CGTTTGTGTGTGTGCGTCATGGCGTACCTTCTCATATCACTCCTTTCATT
GTACGCCAACCATATCTTTGGCATTCTCATTCGCAATAACAAGCACACTA
GCCTTAACTTTTTGCACATCTGTTTCCCCCGTAATACACTTCGCGCCCTA
ATCAAGCATCGATTCGAATGTCACCCATTGCGTTGTCAAAGCTCCCCTTG
GCTGCTTTCTGTTTTCCGTTTCCCCTTCCGTTCTATGTTCCATTTCTGAT
TACACTCGCTATCGTGTCCGCACTCAAGTGCGCCACCATTGCCAATTGTT
GGTATTGGTAGTATCGTTGGTACATGGTAGATATATAGCGACGTACAGCT
TTTCATTCTTGGACTTCTCAGATGCCATTCCAGCCTCAGATATCCTTGGG
AAGTACCTGCCTCCAAAAACCGAGACCCTATCTCTTGCAGACTTGCTCCT
GAGCAGGAAGAAGCCTACTGACGAGAGGCTAATAATCGCTACGTCAACCT
CGATGCGAGCAGATTCAGTGCTGCTTTAAGCGCTATCAACTACCTTCGCA
AAATCTGCAGTCATCCATCACTCGTTGCGAAAGATGTAGAAGACGACCCA
AGTCTTCAGGATGTTGTTCGTGGTGGCACAGAGTACTTCGACATGTCACA
TTCCTCGAAAATGCTCGTAACCATGGCATTATGAGACGCAAGTCTTTCAG
CAGAGGACAAAGTTATTCTCGTAAGCAATTTCACCTCCACTCTTGATCTT
ATACAAGATGCATTGATACGCCGTACCATCAAGTACTGTCGTTTGGATGG
AATTACAAGTGTGAACCATCGAGGAGATACAGTTAGGCAGGTTAATAAGG
GCAGAAACGGACATGTGCTTCTGCTGAGTTCGAAAGGTGGTGGAGTAGGT
CTGAATCTTATTGGCGCAAATCGCCCCATTCTGTTTGATCCGGACTGGAA
TCCAGCGACGGACTTGCAAGCAACGGCGAGTGTCTAGCGTGATGGTTAGA
AGAAACCAGTACTCGTGTATAGGCTCTTATGCACGGGAACGATTGAGGAG
AAAATCTTCCAAAGACAGTTGTTCAAAGGAGCACTGCAGACTGCATTTGA
TGGAGAGGAGGAGAAAGGACTGGATTCCGGCGGTGTGTTTGGGGGTAAAG
AGGGAAACTTTAGTGCTGAGCAGCTGAAAGACTTGTTTCAATACCACTGA
AACCTAAGATTATGTGACACGCTGCAAGTGCTTAAGCGTTCCCAGCTCAC
GGCTGACAAGATAACGACTGATGACGAAGATGAATTTGACATAGATCGAA
AGGAGCTGGCGAAGCACGAAAACCTCTTGAAACGCTTTGGGGAGTATCAA
CGACTTGTCGAAAGTGAGTCGGTTGAGGTTGAAAATCTGGTTATGTGTGA
CGAAGATGAGACCTTGAACACCGCGTTAAATGCGGATTTGAGCACACATG
GCATCGTCTCATACCTGTACACCAAGAAGTGTGGTAGCCAGTACGGGGAA
GAAAACAATGGTTCCCGTGCGAAGTACGAACTTAAGAAACACGATGGAAG
ACCGAGCGGCAGCCTGAAAAGAAAGCTCCCAAAGCTCTTTGAAAGCGATT
CTGAGAAAAGCAGTGATAGTGACGTTGATAAGGCTTTAGCCAAAGTGAAC
GCGGCGAAGAGTGGGACGAAGCTTTGA
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Coding sequence (CDS) from alignment at tig00000209_pilon:82145..84621+

>Ggra326.t1 ID=Ggra326.t1|Name=Ggra326.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1122bp|location=Sequence derived from alignment at tig00000209_pilon:82145..84621+ (Gracilaria gracilis GNS1m male)
ATGATTACCCAGTACGATCTGGACAATGGACTTGAACTTCAATCATATCA
TGGTGGACTGCCTGGCTTTGTAAACAGCTGGATGTCTGCGTTCGTGACAT
ATATAGTCATAGCGTCAGGTGGACAGAACCCTCTCACAATTTCAGAAATA
GACATCCCGAGTGACGACGAATTGGAAGCGATTCTTGAAAACGCTGCGAT
GACTGGAACCGTACAATTTGAATCCCTCCGGGGAAGACGAACAGCCTCTC
TAGGAACTCCAGTGGTGTGTTTAATTTCCAAGTCAGCGGCTTTCGTTCGA
TTTCACGTGAAAGTGATACATCCAATTATACTCTCGTTGAATCATGAAAA
GCATTCGACTGGGACGTCCAGACCGTTGCTAATCAGTGCGGAGACCGGTA
CACGTTTGCTGTCTTGGCAAGTCTCTTACGAGTTTCGCAAGTTTGCCGCT
CAGAATTGTCGTGGCATGTCTTCCGTCAGCCTGACTTCGTTGAAAAACAG
TGCTATGAACTTGTTTGTGCAGAGATTTCGTGAAAAGAAACTTCTTGAAG
GTCACTCTGAGGCGCAATTTCTCGATGTGCTCGCTCGACATCTGAACACC
ACATCAAAGCAAGTGAAGCAATGGATTGGGGTTTGTGGGTCTGCCGAGCA
CGAAGCTGTAGCTACGGAGCTGGTCAGAGGTTTTGAAATGCTCACGGCTG
ACAAGATAACGACTGATGACGAAGATGAATTTGACATAGATCGAAAGGAG
CTGGCGAAGCACGAAAACCTCTTGAAACGCTTTGGGGAGTATCAACGACT
TGTCGAAAGTGAGTCGGTTGAGGTTGAAAATCTGGTTATGTGTGACGAAG
ATGAGACCTTGAACACCGCGTTAAATGCGGATTTGAGCACACATGGCATC
GTCTCATACCTGTACACCAAGAAGTGTGGTAGCCAGTACGGGGAAGAAAA
CAATGGTTCCCGTGCGAAGTACGAACTTAAGAAACACGATGGAAGACCGA
GCGGCAGCCTGAAAAGAAAGCTCCCAAAGCTCTTTGAAAGCGATTCTGAG
AAAAGCAGTGATAGTGACGTTGATAAGGCTTTAGCCAAAGTGAACGCGGC
GAAGAGTGGGACGAAGCTTTGA
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