Ggra3233.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3233.t1
Unique NameGgra3233.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length150
Homology
BLAST of Ggra3233.t1 vs. uniprot
Match: A0A2V3IYJ5 (BET1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYJ5_9FLOR)

HSP 1 Score: 141 bits (355), Expect = 2.060e-40
Identity = 78/143 (54.55%), Postives = 95/143 (66.43%), Query Frame = 0
Query:    7 DEAQRRALLFGARTEPGTYRRAGAAAXXXXXXXXXXXXXXXXXXXXXAADNELLEQNNVERVDGLHGQVRQMRHLAIDIGQEVRDQNAMLDAMQGTFDQGTDSVRRTIAQLRRLARSGGGAHLCALALFSLAFFVLIYLLLRR 149
            D+ +RRALLFGAR +   YRR+  A                      AA+ E++EQ+N E+VDGL GQV  MRHLA+DIG EVR+QNAMLD M GTFD   D++RRTI ++RRLA S  G H+C L LF+ AFFVLIYLLLRR
Sbjct:    7 DDDKRRALLFGARADASAYRRSTTAPRPGATAPYA------------AAEQEMIEQSNSEKVDGLRGQVGHMRHLALDIGAEVREQNAMLDGMGGTFDDSGDALRRTIREVRRLAASRSGGHMCVLFLFAFAFFVLIYLLLRR 137          
BLAST of Ggra3233.t1 vs. uniprot
Match: A0A0M3IBZ4 (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ascaris lumbricoides TaxID=6252 RepID=A0A0M3IBZ4_ASCLU)

HSP 1 Score: 69.7 bits (169), Expect = 1.150e-12
Identity = 38/95 (40.00%), Postives = 57/95 (60.00%), Query Frame = 0
Query:   54 AADNELLEQNNVERVDGLHGQVRQMRHLAIDIGQEVRDQNAMLDAMQGTFDQGTDSVRRTIAQLRRLARSGGGAHLCALALFSLAFFVLIYLLLR 148
            A  N  +E+ N   V+ L G+V  ++ + I IG +VR+QN +L+ M   FD+    +  T+ +L R+AR+GG   LC L LFSL  F++IY L R
Sbjct:   16 AESNSFMERQNDSLVEQLSGKVATLKKITIAIGDDVREQNRLLNEMDSDFDRSKSMLGATMGKLARVARAGGKNLLCYLVLFSLLVFLIIYYLAR 110          
BLAST of Ggra3233.t1 vs. uniprot
Match: A0A811KS82 (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811KS82_9BILA)

HSP 1 Score: 67.8 bits (164), Expect = 5.970e-12
Identity = 34/85 (40.00%), Postives = 55/85 (64.71%), Query Frame = 0
Query:   60 LEQNNVERVDGLHGQVRQMRHLAIDIGQEVRDQNAMLDAMQGTFDQGTDSVRRTIAQLRRLARSGGGAHLCALALFSLAFFVLIY 144
            LEQ N +  + LH +V Q++ + I IG +VRDQN +L++M+G FD     + +T+ +L  ++R+GG   LC L LF+   F++IY
Sbjct:   18 LEQQNDQMTNDLHAKVAQLKRVTIAIGDDVRDQNRLLNSMEGDFDLSNTLLGQTMKKLGIVSRAGGNKVLCYLVLFAFFVFLVIY 102          
BLAST of Ggra3233.t1 vs. uniprot
Match: A0A0M3K0N7 (BET1 homolog (inferred by orthology to a human protein) n=1 Tax=Anisakis simplex TaxID=6269 RepID=A0A0M3K0N7_ANISI)

HSP 1 Score: 67.8 bits (164), Expect = 6.590e-12
Identity = 38/92 (41.30%), Postives = 56/92 (60.87%), Query Frame = 0
Query:   57 NELLEQNNVERVDGLHGQVRQMRHLAIDIGQEVRDQNAMLDAMQGTFDQGTDSVRRTIAQLRRLARSGGGAHLCALALFSLAFFVLIYLLLR 148
            N  +E+ N   VD L G+V  ++ + I IG +VR+QN +L+ M   FD     +  T+ +L R+A++GG   LC L LFSL  F+LIY L+R
Sbjct:   20 NNFMERQNDSLVDQLTGKVAALKKITIAIGDDVREQNRLLNEMDSDFDASRGLLGTTMGKLGRVAKAGGKNLLCYLVLFSLFVFLLIYYLVR 111          
BLAST of Ggra3233.t1 vs. uniprot
Match: A0A0N4VE48 (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4VE48_ENTVE)

HSP 1 Score: 67.4 bits (163), Expect = 8.630e-12
Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = 0
Query:   57 NELLEQNNVERVDGLHGQVRQMRHLAIDIGQEVRDQNAMLDAMQGTFDQGTDSVRRTIAQLRRLARSGGGAHLCALALFSLAFFVLIYLLLR 148
            N+ +E+ N + V+ L  +V  ++ + I IG +VRDQN +L+ +   FD     +  T+ +L  +ARSGGG+ LC L LFSL  F +IY L R
Sbjct:   17 NDFMERQNDDLVEKLSSKVAALKKITIAIGDDVRDQNRLLNEVDSEFDASKSLLGSTMKRLGIVARSGGGSMLCYLVLFSLFVFFIIYYLAR 108          
BLAST of Ggra3233.t1 vs. uniprot
Match: A0A0N4UC61 (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A0N4UC61_DRAME)

HSP 1 Score: 66.6 bits (161), Expect = 1.840e-11
Identity = 37/90 (41.11%), Postives = 56/90 (62.22%), Query Frame = 0
Query:   57 NELLEQNNVERVDGLHGQVRQMRHLAIDIGQEVRDQNAMLDAMQGTFDQGTDSVRRTIAQLRRLARSGGGAHLCALALFSL-AFFVLIYL 145
            +  +E+ N   V+ L G+V  ++ + I IG +VR+QN +L+ M G FD     +  T+ +L R+A+SGG + LC L LFSL  FFV+ YL
Sbjct:   20 DSFIERQNDSLVEQLSGKVAALKRITIAIGDDVREQNRLLNDMDGEFDSSKGLLSSTMLKLNRVAKSGGRSILCYLILFSLFVFFVIYYL 109          
BLAST of Ggra3233.t1 vs. uniprot
Match: A0A2A2JPS9 (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2JPS9_9BILA)

HSP 1 Score: 66.2 bits (160), Expect = 2.470e-11
Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 0
Query:   56 DNELLEQNNVERVDGLHGQVRQMRHLAIDIGQEVRDQNAMLDAMQGTFDQGTDSVRRTIAQLRRLARSGGGAHLCALALFSLAFFVLIYLLLR 148
            D   LE++N E VDGL  +V  ++ + I IG++VR+QN +L+ M   FD     ++ T+ +L  +ARSGG   +C L LF L  F +IY L R
Sbjct:   17 DGSYLERHNDELVDGLSSKVAALKKVTIAIGEDVREQNRLLNDMDSEFDSSKGLLQSTMKRLGIVARSGGKNMICYLILFCLFVFFVIYCLSR 109          
BLAST of Ggra3233.t1 vs. uniprot
Match: A0A0B2VI87 (BET1-like protein n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A0B2VI87_TOXCA)

HSP 1 Score: 66.2 bits (160), Expect = 2.540e-11
Identity = 37/95 (38.95%), Postives = 57/95 (60.00%), Query Frame = 0
Query:   54 AADNELLEQNNVERVDGLHGQVRQMRHLAIDIGQEVRDQNAMLDAMQGTFDQGTDSVRRTIAQLRRLARSGGGAHLCALALFSLAFFVLIYLLLR 148
            A  N  +E+ N   V+ L G+V  ++ + I IG +VR+QN +L+ M   FD     +  T+++L R+A++GG   LC L LFSL  F++IY L R
Sbjct:   16 ADSNSFMERQNDSLVEQLSGKVAALKKITIAIGDDVREQNRLLNEMDSDFDASKSLLGATMSKLGRVAKAGGKNLLCYLVLFSLFVFLVIYYLAR 110          
BLAST of Ggra3233.t1 vs. uniprot
Match: A0A7J7IVS9 (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7IVS9_BUGNE)

HSP 1 Score: 65.5 bits (158), Expect = 5.410e-11
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 0
Query:   60 LEQNNVERVDGLHGQVRQMRHLAIDIGQEVRDQNAMLDAMQGTFDQGTDSVRRTIAQLRRLARSGGGAHLCALALFSLAFFVLIYLLLR 148
            +E  N    + L  QV+Q++ L IDIG EVR QN ML  M   FD+    +  T+ +L  + +SGG  HLC L LF L  F +++LLL+
Sbjct:   23 VEDENSRAENHLASQVKQLKSLTIDIGDEVRYQNKMLSGMDDDFDKSGGFLSSTMNRLTAITKSGGNWHLCYLLLFCLFVFFVLWLLLK 111          
BLAST of Ggra3233.t1 vs. uniprot
Match: G3MII1 (t-SNARE coiled-coil homology domain-containing protein (Fragment) n=2 Tax=Amblyomma TaxID=6942 RepID=G3MII1_AMBMU)

HSP 1 Score: 66.2 bits (160), Expect = 5.900e-11
Identity = 32/91 (35.16%), Postives = 60/91 (65.93%), Query Frame = 0
Query:   58 ELLEQNNVERVDGLHGQVRQMRHLAIDIGQEVRDQNAMLDAMQGTFDQGTDSVRRTIAQLRRLARSGGGAHLCALALFSLAFFVLIYLLLR 148
            + +E+ N + +DGL  ++  ++ ++IDIGQEV+ QN ML  M   FD G   ++ T+ +L +++R+G   ++  L +FSL  F++IY+L++
Sbjct:   55 DTVEEENTQLIDGLKSKISALKTVSIDIGQEVKYQNKMLQDMNTDFDAGEGILKSTMGRLVKMSRAGHNRYIFYLMMFSLFVFLVIYILMK 145          
The following BLAST results are available for this feature:
BLAST of Ggra3233.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYJ52.060e-4054.55BET1-like n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A0M3IBZ41.150e-1240.00t-SNARE coiled-coil homology domain-containing pro... [more]
A0A811KS825.970e-1240.00Hypothetical protein n=1 Tax=Bursaphelenchus okina... [more]
A0A0M3K0N76.590e-1241.30BET1 homolog (inferred by orthology to a human pro... [more]
A0A0N4VE488.630e-1240.22t-SNARE coiled-coil homology domain-containing pro... [more]
A0A0N4UC611.840e-1141.11t-SNARE coiled-coil homology domain-containing pro... [more]
A0A2A2JPS92.470e-1140.86t-SNARE coiled-coil homology domain-containing pro... [more]
A0A0B2VI872.540e-1138.95BET1-like protein n=1 Tax=Toxocara canis TaxID=626... [more]
A0A7J7IVS95.410e-1141.57t-SNARE coiled-coil homology domain-containing pro... [more]
G3MII15.900e-1135.16t-SNARE coiled-coil homology domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 53..120
e-value: 2.4E-6
score: 37.1
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 58..120
score: 15.632967
NoneNo IPR availableGENE3D1.20.5.110coord: 66..125
e-value: 5.5E-10
score: 41.0
NoneNo IPR availablePANTHERPTHR12791:SF28BET1 HOMOLOGcoord: 57..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 148..149
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..147
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 58..120
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 28..50
IPR039897BET1-like proteinPANTHERPTHR12791GOLGI SNARE BET1-RELATEDcoord: 57..147
IPR039899BET1, SNARE domainCDDcd15853SNARE_Bet1coord: 61..119
e-value: 2.06631E-17
score: 69.4538

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000922_piloncontigtig00000922_pilon:135604..136136 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3233.t1Ggra3233.t1Gracilaria gracilis GNS1m malemRNAtig00000922_pilon 135604..136136 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3233.t1 ID=Ggra3233.t1|Name=Ggra3233.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=150bp
MTAVPNDEAQRRALLFGARTEPGTYRRAGAAAGAAAGAAAGAAAGAAAGA
PMGAADNELLEQNNVERVDGLHGQVRQMRHLAIDIGQEVRDQNAMLDAMQ
GTFDQGTDSVRRTIAQLRRLARSGGGAHLCALALFSLAFFVLIYLLLRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR039897BET1
IPR039899BET1_SNARE