Ggra3226.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3226.t1
Unique NameGgra3226.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length271
Homology
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BLAST of Ggra3226.t1 vs. uniprot
Match: A0A2V3IYT7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYT7_9FLOR)

HSP 1 Score: 129 bits (324), Expect = 2.610e-31
Identity = 135/354 (38.14%), Postives = 164/354 (46.33%), Query Frame = 0 
Query:    2 ADRSDQSDASVQRLSRLLLEGWTMLAETCPRASYD------------AADVDADVAATPA--------------------GTAATDGAEAA--------------------------------------------AASAALGDKLLQGWTMLNRACSVCGTPLMRAPRDGAVLCVLCN-EGEXXXXXXXXXXADDDA---AAILSRANRELSVS---RLEAVRGDRLSAETSLVQVERGA-ERRRVRAPRAAAADSAD-----AQLRRARRMDGAQLATLTGAAGADGGGDE--SLLCVDEELRRAEQAAARALRSVRERLAQVRDVEALRACLGAMREACDXXXXXRAARALP 264
            A  SD SDA VQ+LSRLLL+GWTMLA+TCPRAS                +  AD+ +TP                     G    DG +AA                                            A S  LG+KLLQGWTML+ +C  CGTPLM   R G VLCV+C+ +             DDD    A++L RA+REL +S   +     G   +  +SL+ VERGA E R VRA R +A  SA      A L  ARR     LA L   A A    +E  +LL VD+ L   E+ AA AL  +R RL  V DVEALRACL A+R+ CD     RAARALP
Sbjct:   51 ATASDASDAGVQQLSRLLLQGWTMLADTCPRASCHMPLARSRTGRVVCCNCRADIVSTPTQALQLAAPPSAPNGVRTPPTGAQTPDGRQAAMRNTQGDGGGQVANEHVEQHASGCRALASGATGDGGGGRRAGGAAVSQVLGEKLLQGWTMLDASCVTCGTPLMSDAR-GTVLCVVCHSQRAASNAGVGVVDRDDDEVDNASVLRRASRELGLSTRVQRTVAPGTGEALRSSLMPVERGATEGRSVRA-RGSALGSASGGVQPAALPAARRT----LAELPAPAVAVAEEEEQHTLLSVDDTLALVERDAAEALGRLRVRLRCVSDVEALRACLAAIRDGCDAVRAARAARALP 398
The following BLAST results are available for this feature:
BLAST of Ggra3226.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYT72.610e-3138.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009563Sjoegren syndrome/scleroderma autoantigen 1PFAMPF06677Auto_anti-p27coord: 66..102
e-value: 6.7E-16
score: 58.2
coord: 14..31
e-value: 1.9E-5
score: 24.8
NoneNo IPR availablePANTHERPTHR16537SJOEGREN SYNDROME/SCLERODERMA AUTOANTIGEN 1coord: 61..258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000922_piloncontigtig00000922_pilon:120099..121229 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3226.t1Ggra3226.t1Gracilaria gracilis GNS1m malemRNAtig00000922_pilon 120099..121229 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3226.t1 ID=Ggra3226.t1|Name=Ggra3226.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=271bp
MADRSDQSDASVQRLSRLLLEGWTMLAETCPRASYDAADVDADVAATPAG
TAATDGAEAAAASAALGDKLLQGWTMLNRACSVCGTPLMRAPRDGAVLCV
LCNEGERAERAERAEHADDDAAAILSRANRELSVSRLEAVRGDRLSAETS
LVQVERGAERRRVRAPRAAAADSADAQLRRARRMDGAQLATLTGAAGADG
GGDESLLCVDEELRRAEQAAARALRSVRERLAQVRDVEALRACLGAMREA
CDAVRAARAARALPSTTRLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009563SSSCA1