Ggra3218.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3218.t2
Unique NameGgra3218.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length615
Homology
BLAST of Ggra3218.t2 vs. uniprot
Match: A0A2V3IYM5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYM5_9FLOR)

HSP 1 Score: 567 bits (1461), Expect = 8.910e-185
Identity = 326/580 (56.21%), Postives = 408/580 (70.34%), Query Frame = 0
Query:   43 LSDIQTTHVEEREVPHVDSRDVVNSGHMLPDASLATSSDIEDSAPSTGNI--VPTVVDPNAAEPVALSSKNFRRHSNRISASLRYTYAEDETLNFSALNEEDQLVNEPRSKLSIPKVRSGTSSHANDGNCEDVDIFEAANRAAVDINALVDQSKENDSAVGSLDGLDLEPVVLPGDDDYSVAPMSPMQNFTPVAGIYYGNSSPSEETMSPEETVSDKIGIAEYPEYEVLRVAENENEDSVFGSEPNTPVPKESSGWRDARPKRSRDLSEQVRDSVAVQLASLSSIHGGRGAGDRTTGKMVPEVLLRDWSGNTPIEPTVEVVDSAPNSRSSASHVFRTERFPRNVQISSGTDSYRPGNNSNTQVRDRLQEAKDRLLRVSLHTTDEDHSTQN---PSHVRQDVPGKFSTHGFPRRRIGDVIPENEG-STAVNQARANGRLGHSMAFERGIHHRSNERSRTFEPALPKAFAMDPVLQDFQVPVTRKSLSEAGGRTRGL--DHTTAFLDEESYAGNTRNVRKADFGFQPPNHDSRTIQLPSNRKQTSDVEHGASAARDESQAFRNVVGRLVNRMQSAKRMLSTS 614
            LSDIQ++  EER V  +DSR     G     +    +     +APST     VPTVVDPNAAE VALS + FRRHSN+ISASL+YTY +DE L FSALNE DQLV+EPRSKL+IPKV SG  S + DG+ ED++IFEAANRAA DI+ALV  +++  SAVGSLD LDLEP VLPG+DDYSVAPMSP+Q++ PVAGIYYGN S +E  +S +++ +DK GIAEYPEYEVLRV EN+N DSVF SEPNTPVP+ESSGWR+A+PKRSRDLSE +R SV+VQLA+LSSIHGGRG  DRTTGK+VPEVLL DWSGN PIEPTVEVVDSAPNS+SS S VFR  +  R ++ +S  +     +NS   V+  L+EAK+RL++  +  + +++  Q+   P+  R+D  G+FS      R +  V   NE  S  +  + + G    S A ERG + +    S  F+ ALPKAFA DP LQDFQ+P+ RKSLSEAG    G+    ++ F DEES   + R  R+   GF+   HD+R IQLPS R+Q SD+EH  S  R E+ AFR V+GRLV+ +Q AKRMLST+
Sbjct:  771 LSDIQSSRTEERAVAGIDSRVGPPLGQRRASSGADATLPSHSAAPSTSGHKGVPTVVDPNAAELVALSPRAFRRHSNKISASLKYTYEDDEPLTFSALNEADQLVDEPRSKLTIPKVSSGIPSRSYDGDSEDMNIFEAANRAAADISALVADAEDGRSAVGSLDELDLEPAVLPGEDDYSVAPMSPVQDYMPVAGIYYGNPSATENQVSSDDSTTDKGGIAEYPEYEVLRVEENDN-DSVFESEPNTPVPEESSGWRNAQPKRSRDLSEHMRGSVSVQLANLSSIHGGRGVEDRTTGKIVPEVLLHDWSGNMPIEPTVEVVDSAPNSQSSESPVFRMGKVQRKLRKNS--ERTERTSNSTADVQLTLEEAKNRLMQDVVQNSMDEYPLQDSEQPNAERED--GRFSRPSSREREVDSVNNNNEDTSIRIRFSSSAGNRRSSAAIERGGNTKERTGSPHFQAALPKAFAADPKLQDFQMPLERKSLSEAGYWRPGVGGQASSFFEDEESDNEHERGARREYIGFKSSKHDTRPIQLPSQRRQVSDMEHALSLTRTENHAFRGVMGRLVSGVQIAKRMLSTN 1345          
BLAST of Ggra3218.t2 vs. uniprot
Match: R7QSB5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSB5_CHOCR)

HSP 1 Score: 143 bits (360), Expect = 1.190e-32
Identity = 131/421 (31.12%), Postives = 201/421 (47.74%), Query Frame = 0
Query:  208 LEPVVLPGDDDYSVAPMSPMQNFTPVAGIYYGNSSPSEE-TMSPEETVSDKIGIAEYPEYEVLRVAENENEDSVFGSEPNTPVPKESSGWRDARPKRSRDLSEQVRDSVAVQLASLSSIHGGRGAGDRTTGKMVPEVLLRDWSGNTPIEPTVEVVDSAPNSRSSASHVFRTERFPRNVQISSGTDSY-RPGNNSNTQVRDRLQEAKDRLLRVSLHTTDEDHSTQNPSHVRQDV------PGKFSTH--GFPRRRIGDVIPENEGSTAVNQARANGRLGHSMAFERGIHHRSNERSRT------FEPALPKAFAMDPVLQDFQVPVTRKSLSEAGGRTRGLDHTTAFLDEESYAGNTRNVRKADFGFQPPNHDSRTIQLPSNRKQTSDVEHGASAARDESQAFRNVVGRLVNRMQSAKRMLS 612
            L+P+VLP  DD+SVA  +P  + +P+AG++YG  S S E   SP+    D  G+A+YPEYEVL+     NEDS+FGSEPNTPV + +SGW +  P    D   ++ D +  +   L  ++      DR     VPEVLL DWSG+ P+EP V++VDSAPNSRSS ++   +  F  + + +   D Y +  N  ++Q+   L +     L      TD         H R  +      PG+   H  G P   +     E++ S+ ++Q          ++ E   H R    +R          ++    A DP L DFQ  V R+ + + G R  G     +F +       T   R+   GF   +  +        R++ S++E   S+ R+E      V+GRL + M  AK+++S
Sbjct:  206 LDPLVLPSQDDFSVAHCTP--DISPLAGVFYGADSISSELNSSPDTLPRDDAGLADYPEYEVLK--NQTNEDSIFGSEPNTPVLRTTSGWNE--PFGDYD---EMGDRLREERVPLGHVNFE----DRNRDT-VPEVLLHDWSGSIPVEPNVDIVDSAPNSRSSTTY---SRLFSAHTKEA---DEYAKTANLISSQLTANLSK-----LFSESSQTDVGEGAVRDRHGRNSLLDLMPRPGEVIRHESGIPPSPVRTA--EHDNSSVLSQVAW-------VSSEYEDHSRGARAARAELGRGGIFTSIAGTHAPDPRLDDFQTTVQRR-VGDGGRRAAGAKRGRSFAE-------TERAREDADGFAEESGGAT-----GRRRRLSNLE---SSGREEGGLRAVVMGRLASGMHLAKKLVS 576          
The following BLAST results are available for this feature:
BLAST of Ggra3218.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IYM58.910e-18556.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QSB51.190e-3231.12Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 557..586
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 561..579
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000922_piloncontigtig00000922_pilon:103340..105184 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3218.t2Ggra3218.t2Gracilaria gracilis GNS1m malemRNAtig00000922_pilon 103340..105184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3218.t2 ID=Ggra3218.t2|Name=Ggra3218.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=615bp
MIPASRQGEVNDYTQRTACRHPNVSEYREHGSEQLSNATLPGLSDIQTTH
VEEREVPHVDSRDVVNSGHMLPDASLATSSDIEDSAPSTGNIVPTVVDPN
AAEPVALSSKNFRRHSNRISASLRYTYAEDETLNFSALNEEDQLVNEPRS
KLSIPKVRSGTSSHANDGNCEDVDIFEAANRAAVDINALVDQSKENDSAV
GSLDGLDLEPVVLPGDDDYSVAPMSPMQNFTPVAGIYYGNSSPSEETMSP
EETVSDKIGIAEYPEYEVLRVAENENEDSVFGSEPNTPVPKESSGWRDAR
PKRSRDLSEQVRDSVAVQLASLSSIHGGRGAGDRTTGKMVPEVLLRDWSG
NTPIEPTVEVVDSAPNSRSSASHVFRTERFPRNVQISSGTDSYRPGNNSN
TQVRDRLQEAKDRLLRVSLHTTDEDHSTQNPSHVRQDVPGKFSTHGFPRR
RIGDVIPENEGSTAVNQARANGRLGHSMAFERGIHHRSNERSRTFEPALP
KAFAMDPVLQDFQVPVTRKSLSEAGGRTRGLDHTTAFLDEESYAGNTRNV
RKADFGFQPPNHDSRTIQLPSNRKQTSDVEHGASAARDESQAFRNVVGRL
VNRMQSAKRMLSTS*
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