Ggra3115.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3115.t1
Unique NameGgra3115.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length354
Homology
BLAST of Ggra3115.t1 vs. uniprot
Match: A0A2V3IMN8 (DUF4097 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMN8_9FLOR)

HSP 1 Score: 281 bits (719), Expect = 2.510e-89
Identity = 156/338 (46.15%), Postives = 211/338 (62.43%), Query Frame = 0
Query:   10 SAFRVSRRQIHIRRWKLSSTPQGSLRITVPFACNLNISPLDPHQSEWTQTNVQLHIPTSASLSEGEARNITNKLVIHAREESDDKRSAHIEASAVQCDREIEKLLLTHVPELRVEIPGLQNVWIELSHGSIRLRDTIEGDVRIVSDSADVFVNKLRSTSAKIETKEGNVEARILQGNVNIXXXXXXXXXXXXXXXXIKVQCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADIEADGAVISAVQGSLRLKSNNSASITLADTGTELIDIDAEGDVHLGVSKGLAASFDLDAGNVHDEVAVLRKES-GVGGDGTVC-SVRVRATGNVTLRDGRWAERM 345
            S+ RV RRQIHIR W+LS+ P GSL + +PFAC +NISPLDPH+S+WT  N+ LHIPT ++LSE +AR++  K+ +   E+ D      +E S +Q D  +E  ++ H PEL VEIPGL N+ +EL  G +RL DTIEGDV I ++SA +F+NKLRSTSA+IET +G+V+ARILQG+V I                + ++CG                            D DIEA  A ISAVQG L+++S    ++TLAD+G + +DIDA GDV LG+ KG+ A F+L A NV DE   L++ + G G     C SV V A+G+VTLRD  WA+R+
Sbjct:   15 SSIRVVRRQIHIRSWQLSTKPYGSLSVKLPFACKVNISPLDPHKSDWTNANIHLHIPTCSNLSESQARDLAEKVGMKCFEDEDAGSLVRVE-SVLQDDPLLESSVVCHTPELYVEIPGLHNLQVELKTGDLRLCDTIEGDVHIKTESAPIFINKLRSTSARIETLKGDVDARILQGDVCINCDSGNVKLKRAQGNDMSIECGGKFEADSMYGGRIAVRTKGKLRIDAVHGDVDIEAANASISAVQGRLKMRSTGDVNLTLADSGGKRVDIDAGGDVRLGIQKGVVAQFELQARNVRDEAGALQRSAPGPGEHAEDCWSVHVSASGDVTLRDDGWAQRI 351          
BLAST of Ggra3115.t1 vs. uniprot
Match: A0A2V3IF60 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF60_9FLOR)

HSP 1 Score: 90.9 bits (224), Expect = 3.340e-19
Identity = 48/76 (63.16%), Postives = 57/76 (75.00%), Query Frame = 0
Query:   78 NITNKLVIHAREESDDKRSAHIEASAVQCDREIEKLLLTHVPELRVEIPGLQNVWIELSHGSIRLRDTIEGDVRIV 153
            N  ++L I AREE D   SAHIEASAVQ D E +K+  TH PELRVE+PGL N+ IEL HG I+L DTIEGD+RI+
Sbjct:    4 NAASELKIRAREELDRGSSAHIEASAVQNDWESDKVFDTHTPELRVELPGLHNLCIELDHGIIQLHDTIEGDLRII 79          
The following BLAST results are available for this feature:
BLAST of Ggra3115.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IMN82.510e-8946.15DUF4097 domain-containing protein n=1 Tax=Gracilar... [more]
A0A2V3IF603.340e-1963.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34094FAMILY NOT NAMEDcoord: 13..307
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..353
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000120_piloncontigtig00000120_pilon:194285..195346 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3115.t1Ggra3115.t1Gracilaria gracilis GNS1m malemRNAtig00000120_pilon 194285..195346 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3115.t1 ID=Ggra3115.t1|Name=Ggra3115.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=354bp
MTMSTRALCSAFRVSRRQIHIRRWKLSSTPQGSLRITVPFACNLNISPLD
PHQSEWTQTNVQLHIPTSASLSEGEARNITNKLVIHAREESDDKRSAHIE
ASAVQCDREIEKLLLTHVPELRVEIPGLQNVWIELSHGSIRLRDTIEGDV
RIVSDSADVFVNKLRSTSAKIETKEGNVEARILQGNVNIESQIGTVKLTR
AQGNDIKVQCGGPLEAGSLYGGRLTVRSGGAFSADAVHGDADIEADGAVI
SAVQGSLRLKSNNSASITLADTGTELIDIDAEGDVHLGVSKGLAASFDLD
AGNVHDEVAVLRKESGVGGDGTVCSVRVRATGNVTLRDGRWAERMLGLAS
ARH*
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