Ggra3109.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3109.t1
Unique NameGgra3109.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length497
Homology
BLAST of Ggra3109.t1 vs. uniprot
Match: A0A2V3IMM4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMM4_9FLOR)

HSP 1 Score: 314 bits (805), Expect = 1.780e-98
Identity = 209/504 (41.47%), Postives = 316/504 (62.70%), Query Frame = 0
Query:    1 MAPRQIYQDDKALDKLLDNLLHTAQSDNIGTS--TASSSHSRNHLSQSSIREKLTVASGLLQEGKVCSGLPNLQDDDSNVKDVLSEALAAVIHLCKCCKANSNLRNEAERSVYAVNEELLRVKRLNELKMEKISRLDTKIATMKKQASDAEKEKKHTVSGLTTECADLKTKCARSTYRVNHLSLEVKKREREYSLLQQKVQALMTNTKRLSIEPQIVAIVANNATKSHCISREKSLEREETEYQDLVDLSEDQCMNEVITENRALRDLLRAVQEELDDLFISNPNLFDDSKTPANMASNQDSPISRVKDMGTKSDQSSSSETP-------------SPMRQTTSDDAKQAPPVDEKLESQPQLSKRSSVEIGNQECVDQPCTEKMREERIEPCEQPKTPTELRSNPESHSDEVGESESGEGDPHQVPCQEETSLSPASIADAEVGTPVTGSPERNGAFLNNLTPALSAEQMNLPFDMIRENLERSLDQKFELLR---LAMQQVG 486
            MAPRQ+Y+D+KAL  LLDNLL T QS+  G      + SH+  H++ ++I++++  A+  L E K+CS LP+L++ D+N+++VL+ AL A++ L KCCKAN  LR+EAE SV   + E+ RVK+L+E    K +RL+++  +++  AS+++++ K  V  LTT+C DLKTKCA S YRVNHL+LEVKKREREY+ LQQ+V +LMT++KRLSIEPQIVA VAN+   +H ISR +SL++EE  Y++  +LSE+Q  +EV++EN+A RDLLRA+QEELDDL +SN   F + K P +  +        +K+ G+    +S++ T              S +RQ +   +++  P    L + P+       E+G+  C ++P  E+  +  + P    +   E R  P +      ES+S +   +++  +  T++  +   D + GT   G PE +   L+ +TPAL+ EQMNLPF+MIR +LE+SL QKF  LR   L M  VG
Sbjct:    1 MAPRQLYRDEKALGSLLDNLLQTGQSNGSGPLGVNITESHAEQHITGATIKDEIATANTFLAESKLCSLLPSLENGDNNIREVLASALTAIVRLSKCCKANMKLRSEAEHSVLTAHVEIDRVKKLHEAAQAKTNRLESQNVSLRNAASESDQKNKRVVRKLTTDCTDLKTKCANSNYRVNHLTLEVKKREREYTQLQQRVHSLMTHSKRLSIEPQIVATVANDIG-NHPISRGRSLQKEEKAYEESTELSENQFRDEVMSENQAFRDLLRAIQEELDDLLVSNSGAFHEPKRPTSGLTELRQENETIKENGSAKSPNSTNGTDASGSPSENEEDSLSHLRQDSG--SRECSPNSHALTTFPEAKS----ELGS--CEEKPEMEEATQPVL-PSSNDRENAEPRPPPNAMQSTT-ESDSCDRTTYEI-AKSVTNVE-SDFEDCKKGTD-PGHPESHEDVLSGVTPALTVEQMNLPFEMIRADLEQSLKQKFGRLRDVVLGMSTVG 490          
BLAST of Ggra3109.t1 vs. uniprot
Match: R7QIY3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIY3_CHOCR)

HSP 1 Score: 148 bits (374), Expect = 9.630e-37
Identity = 96/282 (34.04%), Postives = 158/282 (56.03%), Query Frame = 0
Query:    1 MAPRQIYQDDKALDKLLDNLLHTAQSDNIGT----STASSSHSRNHLSQSSIREKLTVASGLLQEGKVCSGLPNLQDDDSNVKDVLSEALAAVIHLCKCCKANSNLRNEAERSVYAVNEELLRVKRLNELKMEKISRLDTKIATMKKQASDAEKEKKHTVSGLTTECADLKTKCARSTYRVNHLSLEVKKREREYSLLQQKVQALMTNTKRLSIEPQIVAIVANNATKSHCISREKSLEREETEYQDLVDLSED-QCMNEVITENRALRDLLRAVQEELDDL 277
            MAP+ +YQDD +L   LD L+ +A  D        S  S S  +  +    +   ++VA+ LL+EG  C  LP L +++ N+  VL+ AL+ ++ L +CCKAN +LR +AE    A   +  R+ R+  +  +K+++ +  +   K +  + E + +  V+ LT E   L+T+ A    ++N L+LE KKRER+Y+ LQQ+V ALM+N+K+LSIEP I     N     H   R+ S   +++E +  VD  E+      ++ EN + R LL ++Q E+DD+
Sbjct:    1 MAPKDVYQDDGSLSNFLDGLIQSASDDRADVLGIESQTSPSEPKPPVEPERLVHGISVANDLLREGGQCPPLPFLTENNENIDRVLAAALSTIVRLSRCCKANVSLRVDAENRFQATQIDADRLSRVLHITKDKVTKREGDVVGAKNKLRETEAKNRRKVAQLTAESNSLRTRLAAGEGQINQLNLEAKKRERQYTHLQQRVHALMSNSKKLSIEPAITRGEGNKVKHFH-YQRKSSQTGDDSELE--VDTDEEVNAAGVLLVENNSFRRLLHSIQVEMDDI 279          
The following BLAST results are available for this feature:
BLAST of Ggra3109.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IMM41.780e-9841.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIY39.630e-3734.04Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 464..484
NoneNo IPR availableCOILSCoilCoilcoord: 177..204
NoneNo IPR availableCOILSCoilCoilcoord: 253..273
NoneNo IPR availableCOILSCoilCoilcoord: 131..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 289..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..381
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..404
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 289..441

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000120_piloncontigtig00000120_pilon:165082..166572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3109.t1Ggra3109.t1Gracilaria gracilis GNS1m malemRNAtig00000120_pilon 165082..166572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3109.t1 ID=Ggra3109.t1|Name=Ggra3109.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=497bp
MAPRQIYQDDKALDKLLDNLLHTAQSDNIGTSTASSSHSRNHLSQSSIRE
KLTVASGLLQEGKVCSGLPNLQDDDSNVKDVLSEALAAVIHLCKCCKANS
NLRNEAERSVYAVNEELLRVKRLNELKMEKISRLDTKIATMKKQASDAEK
EKKHTVSGLTTECADLKTKCARSTYRVNHLSLEVKKREREYSLLQQKVQA
LMTNTKRLSIEPQIVAIVANNATKSHCISREKSLEREETEYQDLVDLSED
QCMNEVITENRALRDLLRAVQEELDDLFISNPNLFDDSKTPANMASNQDS
PISRVKDMGTKSDQSSSSETPSPMRQTTSDDAKQAPPVDEKLESQPQLSK
RSSVEIGNQECVDQPCTEKMREERIEPCEQPKTPTELRSNPESHSDEVGE
SESGEGDPHQVPCQEETSLSPASIADAEVGTPVTGSPERNGAFLNNLTPA
LSAEQMNLPFDMIRENLERSLDQKFELLRLAMQQVGKTMCHSGARA*
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