Ggra3056.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3056.t1
Unique NameGgra3056.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length300
Homology
BLAST of Ggra3056.t1 vs. uniprot
Match: A0A2V3J669 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J669_9FLOR)

HSP 1 Score: 266 bits (679), Expect = 8.070e-83
Identity = 144/277 (51.99%), Postives = 190/277 (68.59%), Query Frame = 0
Query:   33 ALTDVSVDAGDIPHIYLAGVGAADRICSSFEYKPRVYLYTSWLQHLFRANQRLGGVQIEVPERTLEAEYRAMYMLSIPRNPTENACLYRNRTVSGDGLAPIPSQDKEPESSVEADESDEDEGEEPPG----------PSTFSTAKEEAVFEEEKDAELARESNKKCFPALDTVQLDNGQRIPMSRLQIGHRELVAPDVFSPVFMFTHKLNNIVSDFVHIRTHSGDRLSVSALHFIYLDSKLIPAANAAIVQHVQLEEGTVSTVSQVSVVQHSGLYNP 299
            ALTDV V+A DIPHIY+AGV A  R C     +PRVYL+TS LQHLFRANQRLGGV++++ ER++E + +A YMLS+PR+ ++NACLYR R +     A  P+   +P  S E D+    E EEP            P+TFS A +EA   EE++A    +S  KCFP    VQL+NG RIPMS ++IGHR LVAP+ FS VFMFTH+++N++S+F+ IRT +G+ LS++A H+IYLDS L+PA  A   Q VQL +G VS ++ VS V+ SGLYNP
Sbjct:  119 ALTDVGVNADDIPHIYVAGVDAGSRTCGKSRLEPRVYLFTSNLQHLFRANQRLGGVELDISERSVEDDPKAAYMLSVPRSKSQNACLYRRRPLHIPESAKEPAIRDDPRPSPEEDDESTAETEEPNSGSETLSGPERPNTFSVANDEAQKLEEQEA---LKSEDKCFPGSAMVQLENGHRIPMSDVRIGHRVLVAPETFSTVFMFTHRVDNVLSEFIQIRTETGEILSLTASHYIYLDSSLVPAKYATTGQQVQLSDGRVSFITAVSTVRDSGLYNP 392          
BLAST of Ggra3056.t1 vs. uniprot
Match: A0A2V3IRZ6 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ6_9FLOR)

HSP 1 Score: 96.7 bits (239), Expect = 6.280e-19
Identity = 50/112 (44.64%), Postives = 73/112 (65.18%), Query Frame = 0
Query:  188 CFPALDTVQLDNGQRIPMSRLQIGHRELVAPDVFSPVFMFTHKLNNIVSDFVHIRTHSGDRLSVSALHFIYLDSKLIPAANAAIVQHVQLEEGTVSTVSQVSVVQHSGLYNP 299
            CFPA  TV++++G    M ++QIG R  V  D+FS VFMFTHK++  VS FV +   SG  +S ++ H++YL+ +L  A  A +   ++L  G  STV +VS+V+ SGLYNP
Sbjct:  272 CFPAEATVEMEDGSTKRMDQVQIGDRVKVGYDMFSEVFMFTHKVSKRVSQFVKLDMASGASISATSGHYVYLNGRLAAARTAKVGDVMELGNGARSTVEKVSMVRKSGLYNP 383          
BLAST of Ggra3056.t1 vs. uniprot
Match: A0A2V3IX71 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX71_9FLOR)

HSP 1 Score: 92.8 bits (229), Expect = 1.630e-17
Identity = 47/112 (41.96%), Postives = 73/112 (65.18%), Query Frame = 0
Query:  188 CFPALDTVQLDNGQRIPMSRLQIGHRELVAPDVFSPVFMFTHKLNNIVSDFVHIRTHSGDRLSVSALHFIYLDSKLIPAANAAIVQHVQLEEGTVSTVSQVSVVQHSGLYNP 299
            CFPA  TVQL++G    M  +Q+G R +V   +FSPVFMFTHKL+ +   FV+I+T SG+ LS++  H++Y++  L  A+       + L + +++ V+QVS V  +GL+NP
Sbjct:  310 CFPADATVQLEDGSAKKMGDVQLGDRVMVDHGIFSPVFMFTHKLSTVRYGFVNIQTSSGNTLSLTPGHYLYVNGHLSAASTVKNGDTLMLADSSLTDVTQVSTVTSTGLFNP 421          
BLAST of Ggra3056.t1 vs. uniprot
Match: A0A6C0IJ15 (HintN domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IJ15_9ZZZZ)

HSP 1 Score: 72.4 bits (176), Expect = 2.130e-10
Identity = 37/112 (33.04%), Postives = 63/112 (56.25%), Query Frame = 0
Query:  188 CFPALDTVQLDNGQRIPMSRLQIGHRELVAPDVFSPVFMFTHKLNNIVSDFVHIRTHSGDRLSVSALHFIYLDSKLIPAANAAIVQHVQLEEGTVSTVSQVSVVQHSGLYNP 299
            CFP    VQL+N + I M  LQIG R L   D +S +++FTH+  N  + F+ + T SG  ++++  H++Y++ K++ A +  I   ++  E     V  +S  +  GL+NP
Sbjct: 3245 CFPNNARVQLENLKIIQMKDLQIGDRVLTNKDTYSTIYLFTHRHLNCKNTFITLTTASGQCITLTPGHYLYVNKKIMEAGDVQIGDCLETIENNSDKVISISTEEAEGLFNP 3356          
BLAST of Ggra3056.t1 vs. uniprot
Match: A0A7S1T7F0 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T7F0_9RHOD)

HSP 1 Score: 64.3 bits (155), Expect = 6.830e-8
Identity = 37/117 (31.62%), Postives = 63/117 (53.85%), Query Frame = 0
Query:  184 SNKKCFPALDTVQLDNGQRIPMSRLQIGHRELVAPDVFSPVFMFTHKLNNIVSDFVHIRTHSGDRLSVSALHFIYLDSKLIPAANAAIVQHV-QLEEGTVSTVSQVSVVQHSGLYNP 299
            +N+ CFP    V L++G    M  L +G   L    VFSPVF F+H+L   +  F+ I T    R+ +S  H ++++ +L  A  A +   + +L+ G +S+V+  ++    GL+NP
Sbjct:  365 TNRACFPGDAVVHLEDGSTKMMKELNVGDHILTDSGVFSPVFYFSHRLQEGLFHFIEIHTSDNRRIHLSPSHKLFVNGRLQEAKVARVGDSLGRLKPGVISSVAHRTL---QGLFNP 478          
The following BLAST results are available for this feature:
BLAST of Ggra3056.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J6698.070e-8351.99Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A2V3IRZ66.280e-1944.64Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A2V3IX711.630e-1741.96Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A6C0IJ152.130e-1033.04HintN domain-containing protein n=1 Tax=viral meta... [more]
A0A7S1T7F06.830e-831.62Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 184..298
e-value: 2.7E-13
score: 49.9
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 188..299
e-value: 6.4E-17
score: 64.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..168
NoneNo IPR availablePANTHERPTHR46706:SF10WARTHOG PROTEIN 6coord: 152..299
NoneNo IPR availablePANTHERPTHR46706FAMILY NOT NAMEDcoord: 152..299
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 188..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000094_piloncontigtig00000094_pilon:392584..393683 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3056.t1Ggra3056.t1Gracilaria gracilis GNS1m malemRNAtig00000094_pilon 392584..393683 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3056.t1 ID=Ggra3056.t1|Name=Ggra3056.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=300bp
MTRKYGLISIKLPRFATRKSRRSGCGLLGILDALTDVSVDAGDIPHIYLA
GVGAADRICSSFEYKPRVYLYTSWLQHLFRANQRLGGVQIEVPERTLEAE
YRAMYMLSIPRNPTENACLYRNRTVSGDGLAPIPSQDKEPESSVEADESD
EDEGEEPPGPSTFSTAKEEAVFEEEKDAELARESNKKCFPALDTVQLDNG
QRIPMSRLQIGHRELVAPDVFSPVFMFTHKLNNIVSDFVHIRTHSGDRLS
VSALHFIYLDSKLIPAANAAIVQHVQLEEGTVSTVSQVSVVQHSGLYNP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf