Ggra3033.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra3033.t1
Unique Name	Ggra3033.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	309

Homology

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BLAST of Ggra3033.t1 vs. uniprot
Match: A0A2V3J1T5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1T5_9FLOR)

HSP 1 Score: 181 bits (458), Expect = 2.990e-51
Identity = 116/246 (47.15%), Postives = 146/246 (59.35%), Query Frame = 0

Query:   67 LSPVDQVVRTPARAENDRWLQQFGIDISLLCIYDSDEEHDAATPQPG-----DENQHPNLTPPRRANMTQFPAELKPLAESEPFEMRSAFPSPVATASHLPARLPHSPEQPAANSQPITPRRFHAARSRRQSVSISQRELISLTHSAKIEPVVQPPDRKPAETRQQLSAACSSSANAVTGSNVFLTPVRASRKQRLQLGADTVVTPVRRSLRLSTKQQNLAPIDQPQARARMLEQFGFTYTPNRSL 307
            + P+D +  TP++ END WL+ FGIDISLL +YDSDEE      QP      DEN HPN+TP      T   A          +E+R     P A  + +P R        ++ S  +TPRR H + SRRQS+ ISQREL SL  +  +EP+     +     +  L  A +S A    G+NVFLTPVRASRKQR QLGADT+VTPVRRSLRL+   + L PID+P+ RARMLE F F YTPNR+L
Sbjct:  101 IQPIDIISSTPSKRENDDWLRAFGIDISLLNLYDSDEE------QPPHSLICDENHHPNITPTSSRQCTVPDA----------YELRPVHNPPSAAHTAVPRRSEQLSIPESSTS--VTPRRLHLS-SRRQSMMISQRELGSLAAALDLEPLNSSSSQSSHPVQMPLPTAKTSKA----GTNVFLTPVRASRKQRAQLGADTIVTPVRRSLRLTRNTEQLVPIDEPKGRARMLEAFDFAYTPNRNL 323

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BLAST of Ggra3033.t1 vs. uniprot
Match: A0A2V3ILX3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILX3_9FLOR)

HSP 1 Score: 67.4 bits (163), Expect = 1.470e-10
Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 0

Query:   59 DERFVRVVLSPVDQVVRTPARAENDRWLQQFGIDISLLCIYDSDEEHDAATPQPGDENQ 117
            D+  VR VLSP D++ RT ARAEND WL+QFG  IS+L IYD D+  + A  Q  DEN+
Sbjct:   10 DQHTVRPVLSPADRISRTLARAENDSWLEQFGASISVLRIYDVDDNQNVAQHQYNDENE 68

The following BLAST results are available for this feature:

BLAST of Ggra3033.t1 vs. uniprot

BLAST of Ggra3033.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J1T5	2.990e-51	47.15	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3ILX3	1.470e-10	55.93	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..179

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000858_pilon	contig	tig00000858_pilon:963960..965091 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra3033.t1	Ggra3033.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000858_pilon 963960..965091 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra3033.t1 ID=Ggra3033.t1|Name=Ggra3033.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=309bp
MACGSSATTPAPRHSPPDSVAVSPAHADDTVSKRLLSPASSPASSPASSP
ASQRVSRGDERFVRVVLSPVDQVVRTPARAENDRWLQQFGIDISLLCIYD
SDEEHDAATPQPGDENQHPNLTPPRRANMTQFPAELKPLAESEPFEMRSA
FPSPVATASHLPARLPHSPEQPAANSQPITPRRFHAARSRRQSVSISQRE
LISLTHSAKIEPVVQPPDRKPAETRQQLSAACSSSANAVTGSNVFLTPVR
ASRKQRLQLGADTVVTPVRRSLRLSTKQQNLAPIDQPQARARMLEQFGFT
YTPNRSLQ*