Ggra3014.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3014.t1
Unique NameGgra3014.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length167
Homology
BLAST of Ggra3014.t1 vs. uniprot
Match: A0A2R4G0U1 (Heat shock protein n=2 Tax=Gracilariopsis TaxID=2781 RepID=A0A2R4G0U1_GRALE)

HSP 1 Score: 123 bits (309), Expect = 8.200e-33
Identity = 65/160 (40.62%), Postives = 98/160 (61.25%), Query Frame = 0
Query:   10 DPFFPFASSRNELRTLCQFADEIDQAFARPEAGRHHTPNYRYYRGSDGLHLEVELPGVAKEHIEIEIHGSNLSITGRRFKE---EKITTEDQNDGDKPKENEDADMSDKKSVAHVYKLRVKAGDNVDEGNIKAEHKNGMLNMFIPFKGDTGVRRIAISQL 166
            DPFFP +S   ++ +  + AD +    +  +   +  PNY Y R  D  HL+VELPGVAKEHIE+E++  NL+IT RRF+    + ++ E     +   EN DA+ +     +HVYK++VK G+NVDE  IKAE+ +G+L + IP +  T  R+I+I+ L
Sbjct:    9 DPFFPLSSFDRDMHSFLRLADRLGTVHSNRDRTNYQVPNYEYNRDKDNFHLQVELPGVAKEHIEVEMNSGNLTITARRFRSSPAQPVSQEPDQSTENTGEN-DANKTRSLKPSHVYKMQVKIGNNVDEEGIKAEYNHGVLELIIPQRKMT-TRKISITDL 166          
BLAST of Ggra3014.t1 vs. uniprot
Match: A0A2V3J651 (Heat shock protein-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J651_9FLOR)

HSP 1 Score: 107 bits (266), Expect = 1.720e-26
Identity = 55/148 (37.16%), Postives = 89/148 (60.14%), Query Frame = 0
Query:   21 ELRTLCQFADEIDQAFARPEAGRHHTPNYRYYRGSDGLHLEVELPGVAKEHIEIEIHGSNLSITGRRFK--EEKITTEDQNDGDKPKENEDADMSDKKSVAHVYKLRVKAGDNVDEGNIKAEHKNGMLNMFIPFKGDTGVRRIAISQL 166
            E+R+  +FAD  +    +     +  PNY + R +D ++L+VELPGVAKEHI++E++   L+IT RRFK    +  +++     + K   DA  ++    + VYKL VK G NVD+  IKAE+ +G+LN+ +P K     R+IA++ +
Sbjct:    6 EMRSQRRFADRSENVCLKTNRTIYKAPNYEFQRDNDNINLQVELPGVAKEHIDLEMNSGKLTITARRFKASHSQPPSKESEQATEEKGGRDAHEAELPQPSCVYKLHVKTGTNVDDEGIKAEYNHGILNIVLPMKKVNTARKIALTDI 153          
BLAST of Ggra3014.t1 vs. uniprot
Match: A0A2V3J372 (Small heat shock protein C4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J372_9FLOR)

HSP 1 Score: 106 bits (264), Expect = 5.020e-26
Identity = 58/159 (36.48%), Postives = 88/159 (55.35%), Query Frame = 0
Query:    9 FDPFFPFASSRNELRTLCQFADEIDQAFARPEAGRHHTPNYRYYRGSDGLHLEVELPGVAKEHIEIEIHGSNLSITGRRFK--EEKITTEDQNDGDKPKENEDADMSDKKSVAHVYKLRVKAGDNVDEGNIKAEHKNGMLNMFIPFKGDTGVRRIAISQ 165
            FDPFFP  S  +++R L + AD +  A+   +      PNY Y R +D + L+VELPGVAKEHI++E++   L+IT RR +    + ++++                       +YKL+V+   NVD+  IKAE+ +G+LNM +P K     RRIAI+ 
Sbjct:    8 FDPFFPLPSFDSDMRPLLRLADRVVNAYPITDRTTIQVPNYEYQRNNDKITLQVELPGVAKEHIDVEMNSGKLTITARRLRLSHAQPSSKESXXXXXXXXXXXXXXXXXXXXXXLYKLQVRISTNVDDEGIKAEYNHGILNMILPLKKIDSARRIAITD 166          
BLAST of Ggra3014.t1 vs. uniprot
Match: R7Q6X4 (Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6X4_CHOCR)

HSP 1 Score: 86.3 bits (212), Expect = 2.920e-18
Identity = 54/157 (34.39%), Postives = 85/157 (54.14%), Query Frame = 0
Query:   12 FFPFASS-RNELRTLCQFADEIDQAFARPEAGRHHTPNYRYYRGSDGLHLEVELPGVAKEHIEIEIHGSNLSITGRRFKEEKITTEDQNDGDK-PKENEDADMSDKKSVAH-VYKLRVKAGDNVDEGNIKAEH-KNGMLNMFIPFKGDTGVRRIAIS 164
            FFP+ +S  N+LRT+ +  D  +     P +     P+YRY   S   H E+E+PGV+K+++ +E+H + L++ G+RF    I  +D +   K P +N D D +DK      VY L  +     +   IKA+H  +G+LNM IP   D G R++ I 
Sbjct:   12 FFPWGNSFGNDLRTMRRMLDMTESG---PRSTHTVEPSYRYEADSAAAHFEIEIPGVSKDNLSVEVHENKLTVRGKRFCRPLIEKKDNSAVAKDPAQNGDPDQADKDPAPSIVYHLEARLPQRANVDAIKADHIGDGILNMTIPMVDDKGPRKVQIE 165          
BLAST of Ggra3014.t1 vs. uniprot
Match: R7QS04 (Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS04_CHOCR)

HSP 1 Score: 80.5 bits (197), Expect = 5.140e-16
Identity = 52/158 (32.91%), Postives = 83/158 (52.53%), Query Frame = 0
Query:   20 NELRTLCQFADEIDQAFARPEAGRHHT--PNYRYYRGSDGLHLEVELPGVAKEHIEIEIHGSNLSITGRRFKEEKITTEDQN----------DGDKPKENEDADMSDKKSVAHVYKLRVKAGDNVDEGNIKAEHK-NGMLNMFIPFKGDTGVRRIAIS 164
            N+LRT+ +  D  +       A   HT  P+YRY    +  H E+E+PGV+K+++ +E+H + L++ G+RF+   I  +D +          +GD     ED   S    + ++ + R+  G NVD   IKA+H  +G+LNM IP   D G R+I I 
Sbjct:   21 NDLRTMRRMLDMTESG-----ARSTHTVEPSYRYEADGEAAHFEIEIPGVSKDNLSVEVHDNKLTVRGKRFRRPLIEKKDDDPAAAKDPAAQNGDPAHPGEDPVPS----IVYLLEARLPQGANVDA--IKADHVGDGILNMTIPMVADKGTRKIQIE 167          
BLAST of Ggra3014.t1 vs. uniprot
Match: A0A2V3IUF0 (SHSP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUF0_9FLOR)

HSP 1 Score: 71.6 bits (174), Expect = 1.240e-12
Identity = 46/139 (33.09%), Postives = 69/139 (49.64%), Query Frame = 0
Query:   39 PEAGRHHTPNYRYYRGSDGLHLEVELPGVAKEHIEIEIHGSNLSITGRRFKEEKITT-EDQNDGDKPKENEDADMSDKKSV----------AHVYKLRVKAGDNVDEGNIKAE-HKNGMLNMFIPFKGDTGVRRIAISQ 165
            P + +   P+Y Y    D   L+VELPGVAKEHI IEI G +L+++ RRF+  K+       +G    E +DAD +   +           A  Y L ++  ++ D   +K E + NG+L + IP    T  R+I I  
Sbjct:   29 PSSSQTVEPSYFYESNQDSAFLQVELPGVAKEHISIEIQGHHLTLSARRFRTSKLAPLSSSTEGGDAAEAQDADHTATPAASEPGPADPTPAFTYVLELRLANDTDLEAVKVESYVNGILTIRIPVVSSTSSRKITIEM 167          
BLAST of Ggra3014.t1 vs. uniprot
Match: A0A6S6TU86 (Heat shock protein Hsp20 n=1 Tax=uncultured Sulfurovum sp. TaxID=269237 RepID=A0A6S6TU86_9PROT)

HSP 1 Score: 64.3 bits (155), Expect = 4.700e-10
Identity = 46/159 (28.93%), Postives = 73/159 (45.91%), Query Frame = 0
Query:    7 RTFDPFFPFASSRNELRTLCQFADEIDQAFARPEAGRHHTPNYRYYRGSDGLHLEVELPGVAKEHIEIEIHGSNLSITGRRFKEEKITTEDQNDGDKPKENEDADMSDKKSVAHVYKLRVKAGDNVDEGNIKAEHKNGMLNMFIP-FKGDTGVRRIAIS 164
            + ++PF     S + + T+    +E      +PE      P       ++  HLEVELPGV KE ++I + G+ LSI+G R   E++  ED    + P                ++       + VD GNI+A  +NG+L + IP  K DT  ++I I 
Sbjct:    4 KRYEPFNDIRKSFDLVNTIINTINEE----TKPEQTSDFRPKVNTRETNESYHLEVELPGVKKEDVDINVDGNVLSISGERNVREEVKDEDYQKIESP--------------YGLFSRSFTLPEKVDTGNIEAGFENGILEISIPKLKVDTSSKKIEIK 144          
BLAST of Ggra3014.t1 vs. uniprot
Match: A0A2N6FQE1 (Heat-shock protein Hsp20 n=1 Tax=Arcobacter sp. TaxID=1872629 RepID=A0A2N6FQE1_9PROT)

HSP 1 Score: 63.5 bits (153), Expect = 8.480e-10
Identity = 47/167 (28.14%), Postives = 74/167 (44.31%), Query Frame = 0
Query:    9 FDPFFPFASSRNELRTLCQF-ADEIDQAFARPEAGRHHTPNYRYYRGSDGLHLEVELPGVAKEHIEIEIHGSNLSITGRRFKEEKITTEDQNDGDKPKENEDADMSDKKSVAHVYKLRVKAG---------DNVDEGNIKAEHKNGMLNMFIP-FKGDTGVRRIAIS 164
            F+P   FA+ +  L  L +  AD    AFA         P+     G    H+E++LPGV KE ++I++H   ++I+G R  +E++  ED                        YK+    G         DN+DE NIKA   +G+L + IP  +    V++I +S
Sbjct:    6 FNPMIEFANMQRSLNNLTKADADTSISAFA---------PSVNTREGEFAYHIEIDLPGVKKEDVKIDLHHKQITISGERSLKEEVKEED-----------------------YYKVETSFGKFQRVFNLPDNIDEENIKATSVDGVLEVTIPKLENSNNVKQIKVS 140          
BLAST of Ggra3014.t1 vs. uniprot
Match: A0A067A157 (Heat-shock protein Hsp20 n=1 Tax=Hydrogenovibrio marinus TaxID=28885 RepID=A0A067A157_HYDMR)

HSP 1 Score: 60.8 bits (146), Expect = 9.710e-9
Identity = 47/162 (29.01%), Postives = 74/162 (45.68%), Query Frame = 0
Query:    5 FARTFDPFFPFASSRNELRTL-CQFADEIDQAFARPEAGRHHTPNYRYYRGSDGLHLEVELPGVAKEHIEIEIHGSNLSITGRRFKEEKITTEDQNDGDKPKENEDADMSDKKSVAHVYKLRVKAGDNVDEGNIKAEHKNGMLNMFIP-FKGDTGVRRIAIS 164
            F RT DP         ELR L  +F     +A A+       +P+     G    H+EV+LPGV KE I++E++   L+I+G R    K   E + D          D    +S    +       D VD  NI A  ++G+L + +P ++GD GV+++ + 
Sbjct:    4 FLRTIDPL-------KELRDLEKRFQSFYPEAMAKDSGTVEFSPSVNTREGEYAYHIEVDLPGVKKEDIKVEVNNGQLTISGER----KTKMETKKD----------DYYRMESQYGKFIRTFNLSDQVDAENITANCEDGVLEVVLPKYEGDRGVQQVEVK 144          
BLAST of Ggra3014.t1 vs. uniprot
Match: A0A7V5G8E6 (Hsp20/alpha crystallin family protein n=3 Tax=Campylobacterales bacterium TaxID=2268180 RepID=A0A7V5G8E6_9PROT)

HSP 1 Score: 60.1 bits (144), Expect = 1.900e-8
Identity = 48/163 (29.45%), Postives = 73/163 (44.79%), Query Frame = 0
Query:    6 ARTFDPFFPFASSRNELRTLCQFADEIDQAFARPEAGRHHTPNYRYYRGSDGLHLEVELPGVAKEHIEIEIHGSNLSITGRRFKEEKITTEDQNDGDKPKENEDADMSDKKSVAHVYKLRVKA---GDNVDEGNIKAEHKNGMLNMFIP-FKGDTGVRRIAIS 164
            A+ ++PF     S + + T+    +E       PE      P        +  HLEVELPGV KE ++I + G+ L+I+G R   E++  ED +                  V   Y L  +A    + VD  NI+A  +NG+L + IP  K DT  ++I I 
Sbjct:    3 AKRYEPFNDIRRSFDLVNTIINTINEEQT----PEKTMDFRPKVNTRETEENYHLEVELPGVKKEDVDISVDGNVLTISGERNVREEVKDEDYH-----------------KVESRYGLFSRAFTLPEKVDTANIEAGFENGILEISIPKLKVDTSSKKIEIK 144          
The following BLAST results are available for this feature:
BLAST of Ggra3014.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R4G0U18.200e-3340.63Heat shock protein n=2 Tax=Gracilariopsis TaxID=27... [more]
A0A2V3J6511.720e-2637.16Heat shock protein-like n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J3725.020e-2636.48Small heat shock protein C4 n=1 Tax=Gracilariopsis... [more]
R7Q6X42.920e-1834.39Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus cris... [more]
R7QS045.140e-1632.91Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus cris... [more]
A0A2V3IUF01.240e-1233.09SHSP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A6S6TU864.700e-1028.93Heat shock protein Hsp20 n=1 Tax=uncultured Sulfur... [more]
A0A2N6FQE18.480e-1028.14Heat-shock protein Hsp20 n=1 Tax=Arcobacter sp. Ta... [more]
A0A067A1579.710e-929.01Heat-shock protein Hsp20 n=1 Tax=Hydrogenovibrio m... [more]
A0A7V5G8E61.900e-829.45Hsp20/alpha crystallin family protein n=3 Tax=Camp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 55..163
e-value: 2.6E-10
score: 40.3
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 40..166
score: 14.601666
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 4..164
e-value: 3.4E-16
score: 61.3
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 36..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..113
NoneNo IPR availableCDDcd06464ACD_sHsps-likecoord: 52..151
e-value: 7.17849E-13
score: 59.1048

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000858_piloncontigtig00000858_pilon:867057..867557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3014.t1Ggra3014.t1Gracilaria gracilis GNS1m malemRNAtig00000858_pilon 867057..867557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3014.t1 ID=Ggra3014.t1|Name=Ggra3014.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=167bp
MALTFARTFDPFFPFASSRNELRTLCQFADEIDQAFARPEAGRHHTPNYR
YYRGSDGLHLEVELPGVAKEHIEIEIHGSNLSITGRRFKEEKITTEDQND
GDKPKENEDADMSDKKSVAHVYKLRVKAGDNVDEGNIKAEHKNGMLNMFI
PFKGDTGVRRIAISQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002068A-crystallin/Hsp20_dom
IPR008978HSP20-like_chaperone