Ggra3005.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3005.t1
Unique NameGgra3005.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length212
Homology
The following BLAST results are available for this feature:
BLAST of Ggra3005.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 40..74
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableCOILSCoilCoilcoord: 89..196
NoneNo IPR availableGENE3D1.20.5.170coord: 4..45
e-value: 1.9E-5
score: 26.2
NoneNo IPR availableGENE3D1.20.5.340coord: 46..120
e-value: 1.9E-9
score: 39.5
coord: 121..200
e-value: 5.0E-8
score: 34.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..204
NoneNo IPR availablePANTHERPTHR44281:SF2SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOGcoord: 2..135
NoneNo IPR availablePANTHERPTHR44281SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOGcoord: 2..135
NoneNo IPR availablePANTHERPTHR44281:SF2SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOGcoord: 68..185
NoneNo IPR availablePANTHERPTHR44281SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOGcoord: 68..185
NoneNo IPR availableSUPERFAMILY90257Myosin rod fragmentscoord: 4..95
NoneNo IPR availableSUPERFAMILY90257Myosin rod fragmentscoord: 85..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000858_piloncontigtig00000858_pilon:854199..854834 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3005.t1Ggra3005.t1Gracilaria gracilis GNS1m malemRNAtig00000858_pilon 854199..854834 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3005.t1 ID=Ggra3005.t1|Name=Ggra3005.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=212bp
LEAAVADLEAAVADLDAAVADLDAAVADLDAAVADLDATVADLDAAVADF
EAAVADLEATVADLEATVADLDAAVAVLDAAVAVLDAAVADLEAAVADLD
AAVAVLEAAVAVLEAAVADLDAAEADLEAAVADLETAVADLEAVVAVLEA
AVADLEAAVADLEAAVADLEAAVADLDAAEADLDALRESDADTEADKEDD
CRASSLSDWSQ*
back to top