Ggra2994.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2994.t1
Unique NameGgra2994.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length529
Homology
BLAST of Ggra2994.t1 vs. uniprot
Match: A0A2V3IXG8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXG8_9FLOR)

HSP 1 Score: 515 bits (1327), Expect = 1.580e-175
Identity = 242/325 (74.46%), Postives = 281/325 (86.46%), Query Frame = 0
Query:  202 PESARTQKSLEEELNFTPATAINFMHFHKTGGVSFKTSLHKFYFDKIKGNGEKVSITDACYSREGVQKDPSKPSFLVWRCDWDRIRDKDEKERNKLDFTFGHQFWGNGIGELLNQRDVRSFTIMRHPFDRKVSFYFHFFVREVGRKEEDVTYEEIRDFLLYDKLIIKADLGRDLGPNYMAGRLLSDGVRGFVGNGSFQYYEVDQNKKYEVSEEALKLVRKYLFVGLQVESGASKCMLKKVVKLFNQVNGVDNGGLEVVDDGAQKLNSGSYSLNAARIWSQLSAEEKVIFDRKERVDILIYEEGERLFKEQVKQFGCTHRLESMKY 526
            P     +K+L E LNFTPATAINFMHFHKTGGVSFKTSLHKFY++K K NGEKV + DACYSR+    DPS PSF++WRCDWD IR+  E ERNKLDFTFGHQFWGNG+G LLN+RDVRSFTIMRHPFDRKVSF++HFFVREVGR+EED+T+EEIRDFLLYDKL I ADLGRDLGPNYMAGRLLSDGV+G+VGN SF+YY+V+ ++K EV+EEALKLVR Y+FVGLQVESGA+KCMLKKVV+ +N VN VDN  LE++DDGA+KLNSGSYSL A RIW   S EE+ +FDRKE+VD+LIYEEGERLFK+ VK FGC+ R+ + KY
Sbjct:  241 PPLQEPEKTLAEVLNFTPATAINFMHFHKTGGVSFKTSLHKFYYEKYKKNGEKVRVRDACYSRKNSNADPSTPSFMMWRCDWDPIREMSESERNKLDFTFGHQFWGNGVGTLLNKRDVRSFTIMRHPFDRKVSFFYHFFVREVGRREEDITFEEIRDFLLYDKLAINADLGRDLGPNYMAGRLLSDGVQGYVGNNSFRYYDVEPHRKREVAEEALKLVRDYVFVGLQVESGAAKCMLKKVVEQYNNVNDVDNSNLELIDDGAEKLNSGSYSLGAKRIWGMFSDEERTLFDRKEKVDLLIYEEGERLFKKHVKLFGCSDRIVAEKY 565          
BLAST of Ggra2994.t1 vs. uniprot
Match: R7QI20 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI20_CHOCR)

HSP 1 Score: 400 bits (1028), Expect = 2.100e-130
Identity = 193/328 (58.84%), Postives = 246/328 (75.00%), Query Frame = 0
Query:  196 TEGKENPESARTQKSLEEELNFTPATAINFMHFHKTGGVSFKTSLHKFYFDKIKGNGEKVSITDACYSREGVQKDPSKPSFLVWRCDWDRIRDKDEKERNKLDFTFGHQFWGNGIGELLNQRDVRSFTIMRHPFDRKVSFYFHFFVREVGRKEEDVTYEEIRDFLLYDKLIIKADLGRDLGPNYMAGRLLSDGVRGFVGNGSFQYYEVDQNKKYEVSEEALKLVRKYLFVGLQVESGASKCMLKKVVKLFNQVNGVDNGGLEVVDDGAQKLNSGSYSLNAARIWSQLSAEEKVIFDRKERVDILIYEEGERLFKEQVKQFGCTHRLES 523
            T  K   + +   KSLEE L+FTP TAINFMHFHKTGGVSFKTSLH FY  K K +G +V   D+CY RE       + SF VWRCDWD I   + +ERN+ DF FGHQF  +G+ ELLN RD+R+FT+MRHPFDRKVSFY+HFFVREVGRKE +V++EE+R+FLL+DKL I A+LGRDLGPNYMAGRLLSDG  GF GN    YY V+  +   V E+A+K++ KY+FVGLQ ES AS+CML+K ++++N+VNGV N GLE +D    +LNSGSYS++A  IW + S E++++FD KE+VD+ IY EG RLF++ V+ FGC  R++S
Sbjct:  242 TNAKTTSQESEQTKSLEEVLHFTPKTAINFMHFHKTGGVSFKTSLHVFYNRKFKSDGSQVVARDSCYKRESTLGG-GEQSFAVWRCDWDPILQLNNQERNRHDFVFGHQFGLHGVDELLNLRDLRTFTVMRHPFDRKVSFYYHFFVREVGRKESEVSFEEVREFLLFDKLRIDAELGRDLGPNYMAGRLLSDGKEGFTGNSYHSYYGVEGRQVEGVVEKAVKIIGKYVFVGLQEESAASRCMLRKTMEVYNKVNGVSNVGLEAIDGRNGRLNSGSYSMSAQAIWGRFSMEDRIVFDMKEKVDLAIYREGSRLFRKHVQVFGCADRVKS 568          
BLAST of Ggra2994.t1 vs. uniprot
Match: R7Q8D2 (Sulfotransferase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8D2_CHOCR)

HSP 1 Score: 77.0 bits (188), Expect = 1.260e-11
Identity = 81/298 (27.18%), Postives = 126/298 (42.28%), Query Frame = 0
Query:  225 FMHFHKTGGVSFKTSLHKFYFDKIKGNGEKVSITDACYSREGVQK----DPSKPSFLVWRCDWDRIRDKDEKERNKLDFTFGHQFWGNGIGELLNQRDVRSFTIMRHPFDRKVSFYFHFFVREVGRKEED-VTYEEIRDFLLYDKLIIKADLGRDLGPNYMAGRLLSDGVRGFVGNGSFQYYEVDQNKKYEVSEEALKLVRKYLFVGLQVESGASKCMLKKVVKLFNQVNGVDNGGLEVVDDGAQKL--NSGSYSLNAARIWSQLSAEEKVIFDRKERVDILIYEEGERLFKEQVKQF 515
            F+H HKTGG S KTSL  F     K NG  +  T    S +G+        +K       C+ D +      +R ++D   GHQF G     L   RDVR FT +RHP  RKVS + HF   + G++       E  R+++            + L  +  AG L +D    FV   SF      +  K+        L+ ++ FVGLQ     S C+L +++   N   G +           +K+  N  +      +    +S   K    R E  D+ +Y+  ERLF+ +++++
Sbjct:   70 FLHLHKTGGNSLKTSLFSF----AKRNGLGLHHTCHATSGDGLLSAWWFHRTKRMGKGLDCNLDVLAALPSHKRAEIDLVMGHQFVG--AHSLFPDRDVRYFTFVRHPLARKVSHFIHFERGKPGKRSMTRYLVERNRNYMT-----------KRLATDVRAGELATDLRARFVDLDSFAARAALRAAKHN-------LIDRFFFVGLQERYAESVCVLARIL---NAACGRERKLAREFAMRPEKVVRNRENERGETKQKIEAMSETVKGAVLRAESADVELYQFAERLFENKLRKY 340          
The following BLAST results are available for this feature:
BLAST of Ggra2994.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IXG81.580e-17574.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QI202.100e-13058.84Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q8D21.260e-1127.18Sulfotransferase n=1 Tax=Chondrus crispus TaxID=27... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 220..527
e-value: 1.4E-17
score: 65.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000858_piloncontigtig00000858_pilon:830437..832023 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2994.t1Ggra2994.t1Gracilaria gracilis GNS1m malemRNAtig00000858_pilon 830437..832023 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2994.t1 ID=Ggra2994.t1|Name=Ggra2994.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=529bp
MLMWMEQTGFAPSLDLAASQLLTPTTQHILNLSDTLFSNSQYNEGSNGTD
STEKVRKYGTREATTAPLVSAQMETKPSAISVRESYQEGSKEQTKETAED
TEKEPDSSSVEGKGTEENTGAEGDVYAGDNHSEDAQNIDDTRKESQSEAQ
NDVQDDTQNEKTANQESEELSDIHEQAGEANSRFGKGKGESNVDDTEGKE
NPESARTQKSLEEELNFTPATAINFMHFHKTGGVSFKTSLHKFYFDKIKG
NGEKVSITDACYSREGVQKDPSKPSFLVWRCDWDRIRDKDEKERNKLDFT
FGHQFWGNGIGELLNQRDVRSFTIMRHPFDRKVSFYFHFFVREVGRKEED
VTYEEIRDFLLYDKLIIKADLGRDLGPNYMAGRLLSDGVRGFVGNGSFQY
YEVDQNKKYEVSEEALKLVRKYLFVGLQVESGASKCMLKKVVKLFNQVNG
VDNGGLEVVDDGAQKLNSGSYSLNAARIWSQLSAEEKVIFDRKERVDILI
YEEGERLFKEQVKQFGCTHRLESMKYKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase