Ggra2994.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2994.t1
Unique NameGgra2994.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length529
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000858_piloncontigtig00000858_pilon:830437..832023 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2994Ggra2994Gracilaria gracilis GNS1m malegenetig00000858_pilon 830437..832023 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2994.t1.stop1Ggra2994.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000858_pilon 830437..830439 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2994.t1.CDS1Ggra2994.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000858_pilon 830437..832023 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2994.t1.exon1Ggra2994.t1.exon1Gracilaria gracilis GNS1m maleexontig00000858_pilon 830437..832023 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2994.t1.start1Ggra2994.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000858_pilon 832021..832023 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2994.t1Ggra2994.t1Gracilaria gracilis GNS1m malepolypeptidetig00000858_pilon 830437..832023 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2994.t1 ID=Ggra2994.t1|Name=Ggra2994.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=529bp
MLMWMEQTGFAPSLDLAASQLLTPTTQHILNLSDTLFSNSQYNEGSNGTD
STEKVRKYGTREATTAPLVSAQMETKPSAISVRESYQEGSKEQTKETAED
TEKEPDSSSVEGKGTEENTGAEGDVYAGDNHSEDAQNIDDTRKESQSEAQ
NDVQDDTQNEKTANQESEELSDIHEQAGEANSRFGKGKGESNVDDTEGKE
NPESARTQKSLEEELNFTPATAINFMHFHKTGGVSFKTSLHKFYFDKIKG
NGEKVSITDACYSREGVQKDPSKPSFLVWRCDWDRIRDKDEKERNKLDFT
FGHQFWGNGIGELLNQRDVRSFTIMRHPFDRKVSFYFHFFVREVGRKEED
VTYEEIRDFLLYDKLIIKADLGRDLGPNYMAGRLLSDGVRGFVGNGSFQY
YEVDQNKKYEVSEEALKLVRKYLFVGLQVESGASKCMLKKVVKLFNQVNG
VDNGGLEVVDDGAQKLNSGSYSLNAARIWSQLSAEEKVIFDRKERVDILI
YEEGERLFKEQVKQFGCTHRLESMKYKL*
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spliced messenger RNA

>Ggra2994.t1 ID=Ggra2994.t1|Name=Ggra2994.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1587bp|location=Sequence derived from alignment at tig00000858_pilon:830437..832023- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTTATGTGGATGGAACAAACAGGATTTGCTCCATCTTTAGACTTGGC
TGCATCTCAGTTGCTCACGCCAACAACACAACATATCTTGAACCTTTCGG
ACACACTGTTCTCCAACTCTCAGTATAATGAAGGCTCCAACGGCACCGAT
AGCACTGAAAAAGTGAGGAAATACGGTACTCGTGAAGCTACGACAGCACC
ATTGGTGTCAGCGCAGATGGAGACTAAACCGAGTGCCATTTCTGTGCGCG
AGAGCTACCAAGAGGGATCCAAAGAACAAACCAAGGAGACCGCCGAAGAT
ACCGAGAAAGAGCCAGACAGCAGTAGTGTAGAAGGTAAAGGAACGGAGGA
GAATACGGGAGCTGAAGGTGATGTCTATGCGGGAGATAATCATTCTGAAG
ATGCTCAAAACATTGACGATACTCGCAAAGAATCCCAGAGCGAAGCTCAA
AACGACGTTCAAGACGATACGCAAAACGAGAAAACCGCCAATCAGGAATC
TGAAGAACTGTCTGATATACATGAACAAGCTGGGGAAGCCAACAGCAGAT
TTGGAAAAGGAAAAGGGGAATCCAACGTAGATGACACCGAAGGAAAAGAA
AATCCGGAGTCAGCGAGAACTCAGAAAAGCCTTGAGGAGGAACTGAACTT
CACTCCCGCCACTGCAATTAACTTCATGCACTTCCACAAAACTGGTGGAG
TGAGCTTCAAAACTTCGTTACACAAGTTCTACTTTGACAAAATCAAAGGC
AATGGAGAAAAGGTTTCCATAACAGATGCATGCTACTCGAGGGAGGGAGT
TCAGAAAGATCCGTCGAAGCCATCATTTTTGGTGTGGCGTTGTGATTGGG
ATCGAATTCGAGACAAGGATGAGAAGGAAAGGAACAAACTTGATTTCACT
TTTGGTCACCAGTTTTGGGGAAATGGGATCGGCGAGTTGCTCAATCAACG
CGATGTACGTTCGTTTACGATCATGAGGCATCCTTTTGACAGAAAAGTAT
CATTCTACTTCCATTTCTTCGTTCGGGAAGTTGGAAGAAAAGAAGAAGAC
GTCACTTATGAGGAGATTCGCGATTTCTTATTGTATGATAAGCTCATCAT
AAAGGCGGACCTCGGACGAGATCTTGGACCAAACTATATGGCCGGTAGGC
TTTTGTCAGATGGAGTGAGAGGTTTCGTTGGCAATGGTTCGTTCCAGTAC
TACGAAGTCGATCAGAACAAGAAATATGAAGTTTCAGAGGAGGCACTCAA
GTTGGTGAGGAAGTACTTATTCGTTGGACTGCAAGTTGAATCCGGAGCAT
CAAAGTGCATGTTAAAGAAGGTGGTTAAATTATTTAATCAGGTGAATGGT
GTTGACAATGGTGGTCTGGAGGTTGTAGATGACGGCGCACAGAAACTGAA
TAGCGGATCCTACTCTCTGAATGCAGCACGAATCTGGAGTCAGCTTTCTG
CAGAGGAGAAGGTCATCTTCGATCGGAAGGAAAGAGTTGACATTCTCATT
TATGAAGAAGGTGAGAGGTTATTCAAGGAGCAAGTGAAGCAGTTCGGCTG
CACCCACCGCTTAGAATCGATGAAGTACAAATTGTAA
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protein sequence of Ggra2994.t1

>Ggra2994.t1 ID=Ggra2994.t1|Name=Ggra2994.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=529bp
MLMWMEQTGFAPSLDLAASQLLTPTTQHILNLSDTLFSNSQYNEGSNGTD
STEKVRKYGTREATTAPLVSAQMETKPSAISVRESYQEGSKEQTKETAED
TEKEPDSSSVEGKGTEENTGAEGDVYAGDNHSEDAQNIDDTRKESQSEAQ
NDVQDDTQNEKTANQESEELSDIHEQAGEANSRFGKGKGESNVDDTEGKE
NPESARTQKSLEEELNFTPATAINFMHFHKTGGVSFKTSLHKFYFDKIKG
NGEKVSITDACYSREGVQKDPSKPSFLVWRCDWDRIRDKDEKERNKLDFT
FGHQFWGNGIGELLNQRDVRSFTIMRHPFDRKVSFYFHFFVREVGRKEED
VTYEEIRDFLLYDKLIIKADLGRDLGPNYMAGRLLSDGVRGFVGNGSFQY
YEVDQNKKYEVSEEALKLVRKYLFVGLQVESGASKCMLKKVVKLFNQVNG
VDNGGLEVVDDGAQKLNSGSYSLNAARIWSQLSAEEKVIFDRKERVDILI
YEEGERLFKEQVKQFGCTHRLESMKYKL*
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mRNA from alignment at tig00000858_pilon:830437..832023-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2994.t1 ID=Ggra2994.t1|Name=Ggra2994.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1587bp|location=Sequence derived from alignment at tig00000858_pilon:830437..832023- (Gracilaria gracilis GNS1m male)
ATGCTTATGTGGATGGAACAAACAGGATTTGCTCCATCTTTAGACTTGGC
TGCATCTCAGTTGCTCACGCCAACAACACAACATATCTTGAACCTTTCGG
ACACACTGTTCTCCAACTCTCAGTATAATGAAGGCTCCAACGGCACCGAT
AGCACTGAAAAAGTGAGGAAATACGGTACTCGTGAAGCTACGACAGCACC
ATTGGTGTCAGCGCAGATGGAGACTAAACCGAGTGCCATTTCTGTGCGCG
AGAGCTACCAAGAGGGATCCAAAGAACAAACCAAGGAGACCGCCGAAGAT
ACCGAGAAAGAGCCAGACAGCAGTAGTGTAGAAGGTAAAGGAACGGAGGA
GAATACGGGAGCTGAAGGTGATGTCTATGCGGGAGATAATCATTCTGAAG
ATGCTCAAAACATTGACGATACTCGCAAAGAATCCCAGAGCGAAGCTCAA
AACGACGTTCAAGACGATACGCAAAACGAGAAAACCGCCAATCAGGAATC
TGAAGAACTGTCTGATATACATGAACAAGCTGGGGAAGCCAACAGCAGAT
TTGGAAAAGGAAAAGGGGAATCCAACGTAGATGACACCGAAGGAAAAGAA
AATCCGGAGTCAGCGAGAACTCAGAAAAGCCTTGAGGAGGAACTGAACTT
CACTCCCGCCACTGCAATTAACTTCATGCACTTCCACAAAACTGGTGGAG
TGAGCTTCAAAACTTCGTTACACAAGTTCTACTTTGACAAAATCAAAGGC
AATGGAGAAAAGGTTTCCATAACAGATGCATGCTACTCGAGGGAGGGAGT
TCAGAAAGATCCGTCGAAGCCATCATTTTTGGTGTGGCGTTGTGATTGGG
ATCGAATTCGAGACAAGGATGAGAAGGAAAGGAACAAACTTGATTTCACT
TTTGGTCACCAGTTTTGGGGAAATGGGATCGGCGAGTTGCTCAATCAACG
CGATGTACGTTCGTTTACGATCATGAGGCATCCTTTTGACAGAAAAGTAT
CATTCTACTTCCATTTCTTCGTTCGGGAAGTTGGAAGAAAAGAAGAAGAC
GTCACTTATGAGGAGATTCGCGATTTCTTATTGTATGATAAGCTCATCAT
AAAGGCGGACCTCGGACGAGATCTTGGACCAAACTATATGGCCGGTAGGC
TTTTGTCAGATGGAGTGAGAGGTTTCGTTGGCAATGGTTCGTTCCAGTAC
TACGAAGTCGATCAGAACAAGAAATATGAAGTTTCAGAGGAGGCACTCAA
GTTGGTGAGGAAGTACTTATTCGTTGGACTGCAAGTTGAATCCGGAGCAT
CAAAGTGCATGTTAAAGAAGGTGGTTAAATTATTTAATCAGGTGAATGGT
GTTGACAATGGTGGTCTGGAGGTTGTAGATGACGGCGCACAGAAACTGAA
TAGCGGATCCTACTCTCTGAATGCAGCACGAATCTGGAGTCAGCTTTCTG
CAGAGGAGAAGGTCATCTTCGATCGGAAGGAAAGAGTTGACATTCTCATT
TATGAAGAAGGTGAGAGGTTATTCAAGGAGCAAGTGAAGCAGTTCGGCTG
CACCCACCGCTTAGAATCGATGAAGTACAAATTGTAA
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Coding sequence (CDS) from alignment at tig00000858_pilon:830437..832023-

>Ggra2994.t1 ID=Ggra2994.t1|Name=Ggra2994.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1587bp|location=Sequence derived from alignment at tig00000858_pilon:830437..832023- (Gracilaria gracilis GNS1m male)
ATGCTTATGTGGATGGAACAAACAGGATTTGCTCCATCTTTAGACTTGGC
TGCATCTCAGTTGCTCACGCCAACAACACAACATATCTTGAACCTTTCGG
ACACACTGTTCTCCAACTCTCAGTATAATGAAGGCTCCAACGGCACCGAT
AGCACTGAAAAAGTGAGGAAATACGGTACTCGTGAAGCTACGACAGCACC
ATTGGTGTCAGCGCAGATGGAGACTAAACCGAGTGCCATTTCTGTGCGCG
AGAGCTACCAAGAGGGATCCAAAGAACAAACCAAGGAGACCGCCGAAGAT
ACCGAGAAAGAGCCAGACAGCAGTAGTGTAGAAGGTAAAGGAACGGAGGA
GAATACGGGAGCTGAAGGTGATGTCTATGCGGGAGATAATCATTCTGAAG
ATGCTCAAAACATTGACGATACTCGCAAAGAATCCCAGAGCGAAGCTCAA
AACGACGTTCAAGACGATACGCAAAACGAGAAAACCGCCAATCAGGAATC
TGAAGAACTGTCTGATATACATGAACAAGCTGGGGAAGCCAACAGCAGAT
TTGGAAAAGGAAAAGGGGAATCCAACGTAGATGACACCGAAGGAAAAGAA
AATCCGGAGTCAGCGAGAACTCAGAAAAGCCTTGAGGAGGAACTGAACTT
CACTCCCGCCACTGCAATTAACTTCATGCACTTCCACAAAACTGGTGGAG
TGAGCTTCAAAACTTCGTTACACAAGTTCTACTTTGACAAAATCAAAGGC
AATGGAGAAAAGGTTTCCATAACAGATGCATGCTACTCGAGGGAGGGAGT
TCAGAAAGATCCGTCGAAGCCATCATTTTTGGTGTGGCGTTGTGATTGGG
ATCGAATTCGAGACAAGGATGAGAAGGAAAGGAACAAACTTGATTTCACT
TTTGGTCACCAGTTTTGGGGAAATGGGATCGGCGAGTTGCTCAATCAACG
CGATGTACGTTCGTTTACGATCATGAGGCATCCTTTTGACAGAAAAGTAT
CATTCTACTTCCATTTCTTCGTTCGGGAAGTTGGAAGAAAAGAAGAAGAC
GTCACTTATGAGGAGATTCGCGATTTCTTATTGTATGATAAGCTCATCAT
AAAGGCGGACCTCGGACGAGATCTTGGACCAAACTATATGGCCGGTAGGC
TTTTGTCAGATGGAGTGAGAGGTTTCGTTGGCAATGGTTCGTTCCAGTAC
TACGAAGTCGATCAGAACAAGAAATATGAAGTTTCAGAGGAGGCACTCAA
GTTGGTGAGGAAGTACTTATTCGTTGGACTGCAAGTTGAATCCGGAGCAT
CAAAGTGCATGTTAAAGAAGGTGGTTAAATTATTTAATCAGGTGAATGGT
GTTGACAATGGTGGTCTGGAGGTTGTAGATGACGGCGCACAGAAACTGAA
TAGCGGATCCTACTCTCTGAATGCAGCACGAATCTGGAGTCAGCTTTCTG
CAGAGGAGAAGGTCATCTTCGATCGGAAGGAAAGAGTTGACATTCTCATT
TATGAAGAAGGTGAGAGGTTATTCAAGGAGCAAGTGAAGCAGTTCGGCTG
CACCCACCGCTTAGAATCGATGAAGTACAAATTGTAA
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