Ggra2962.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2962.t1
Unique NameGgra2962.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length198
Homology
BLAST of Ggra2962.t1 vs. uniprot
Match: A0A2V3IW50 (Pyridoxal 5'-phosphate synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW50_9FLOR)

HSP 1 Score: 216 bits (549), Expect = 2.990e-68
Identity = 105/194 (54.12%), Postives = 138/194 (71.13%), Query Frame = 0
Query:    5 PPWQELINCCIRQERKPTSYFLQLASLTVSGEASCRTVVFRGWHETASS-ETPSLLIATDARSAKVHGLFKYPRAEACWYFLEPRVQFRIVGDVSVITSDETNHDLSALRVKQWNDLSPAARALYMCPHPGRPKEKEYSKEQIEEVANSQHPLEWFAVLSLRPERVDNVDLRANDRRLFELDSDGNWIENYINP 197
            P W +LIN CI++E  PT+ FLQLA+LT  GEASCRTVVFRGWH T  +  TP+L + TD RS K+ GL KYPRAEACWYF E R QFR+ G+V+VI S+E +  LS  R++QW  +  +AR ++ CP PGR  E   S+EQ E +  S+ P+E FA+L L+P RVD VDLRANDR+L ++ ++  W E ++NP
Sbjct:    5 PDWVQLINSCIKREASPTARFLQLATLTELGEASCRTVVFRGWHTTPDTITTPALKVVTDNRSNKIPGLRKYPRAEACWYFTESRKQFRLTGNVTVIDSEEGDGVLSRTRLEQWRQMPASARTVFACPPPGRAAEDPLSEEQKEMIVESEQPVECFALLLLKPTRVDIVDLRANDRQLSQIGANTEWTEQWLNP 198          
BLAST of Ggra2962.t1 vs. uniprot
Match: pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Pleurocapsa sp. PCC 7319 TaxID=118161 RepID=UPI00034C1672 (pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Pleurocapsa sp. PCC 7319 TaxID=118161 RepID=UPI00034C1672)

HSP 1 Score: 134 bits (337), Expect = 3.050e-36
Identity = 82/195 (42.05%), Postives = 112/195 (57.44%), Query Frame = 0
Query:    6 PWQELINCCIRQER-KPTSYFLQLASLTVSGEASCRTVVFRGWHETASSETPSLLIATDARSAKVHGLFKYPRAEACWYFLEPRVQFRIVGDVSVITSDETNHDLSALRVKQWNDLSPAARALYMCPHPGRPKEKEYSKEQIEEVANSQHPLEWFAVLSLRPERVDNVDLRAN--DRRLFELDSDGNWIENYINP 197
            PW+ L++  I + R KP S + QLA++T  G  + RTVVFRG+ +    E  SL I TDARSAK+  +     AE CWYF + R QFRI G++ +ITS ETN DL   R   W  LS AAR+ +  P PG+P+  +   +     AN   PL  F +L L P +VD++ LR +   R L+ L SD  W  + +NP
Sbjct:    4 PWRSLLSSAIHRNRSKPYSRYFQLATVTSEGYPANRTVVFRGFLD---DEQNSLKIITDARSAKIQDIEHQAIAEVCWYFTKTREQFRITGNLQLITSAETNSDLKQARQTTWQHLSDAARSQFAWPDPGKPQSDKALFKVNPPDANL--PLNNFGLLLLIPNKVDHLQLRGDPQQRCLYTLQSDQTWSTDPVNP 193          
BLAST of Ggra2962.t1 vs. uniprot
Match: A0A8J6R3Q0 (Pyridoxamine 5'-phosphate oxidase family protein n=3 Tax=unclassified Trichocoleus TaxID=2628910 RepID=A0A8J6R3Q0_9CYAN)

HSP 1 Score: 124 bits (311), Expect = 2.460e-32
Identity = 70/195 (35.90%), Postives = 113/195 (57.95%), Query Frame = 0
Query:    6 PWQELINCCIRQER-KPTSYFLQLASLTVSGEASCRTVVFRGWHETASSETPSLLIATDARSAKVHGLFKYPRAEACWYFLEPRVQFRIVGDVSVITSDETNHDLSALRVKQWNDLSPAARALYMCPHPGRPKEKEYSKEQIEEVANSQHPLEWFAVLSLRPERVDNVDLRAN--DRRLFELDSDGNWIENYINP 197
            PW+  ++  + + R +P + FLQLA++ ++G+ + RTVVFRG+     ++T  L   TD RS K   + + P+AEACWYF++ R QFRI G +++I + + +  L   R   W +LS AAR  +  P PG P+    +     +  ++  PL +F +L L PERVD+++LR    +R L++ D +  W    INP
Sbjct:    5 PWRSPLSRALHRNRSQPEARFLQLATIQLNGQPANRTVVFRGF----LNDTDQLKFVTDTRSEKTEQIEQNPKAEACWYFIKTREQFRIAGTLTLIHATDPDSALQQARKTAWQELSDAARLQFAWPTPGEPRAD--TAAFAPQPPDNTEPLPYFCLLLLEPERVDHLELRGEPQNRCLYQRDQNQVWSAQAINP 193          
BLAST of Ggra2962.t1 vs. uniprot
Match: A0A2S6CX72 (Pyridoxamine 5'-phosphate oxidase n=2 Tax=Cuspidothrix issatschenkoi TaxID=230752 RepID=A0A2S6CX72_9CYAN)

HSP 1 Score: 119 bits (299), Expect = 1.540e-30
Identity = 70/196 (35.71%), Postives = 113/196 (57.65%), Query Frame = 0
Query:    6 PWQELINCCIRQERKPT-SYFLQLASLTVSGEASCRTVVFRGWHETASSETPSLLIATDARSAKVHGLFKYPRAEACWYFLEPRVQFRIVGDVSVITSDETNHDLSALRVKQWNDLSPAARALYMCPHPGRPKEKEYSKEQIEEVA-NSQHPLEWFAVLSLRPERVDNVDLRAN--DRRLFELDSDGNWIENYINP 197
            PW+ +I+  + + R    S ++QLA++  +G  + RT+VFRG+ E     T  L   TD RS K   + K P AE CWYF + R QFRI G+++++T++   H L   R+K W +LS AAR  +  PHPG+P+    + E    +A ++  PL  F +L L P ++D+++LR    +RR++  + +  W+   INP
Sbjct:    5 PWRSIISHALHRNRSLVYSRYVQLATVGENGLPANRTIVFRGFLE----NTNQLKFITDIRSEKAEQISKQPAAEICWYFPKTREQFRIAGELTLVTANSHPH-LQPARIKMWQELSDAARLQFAWPHPGQPRNT--TPEAFTPLAPDTIQPLTTFCLLLLEPVKLDHLELRGEPQNRRVYYRNENQEWLTQAINP 193          
BLAST of Ggra2962.t1 vs. uniprot
Match: A0A563VW10 (Pyridoxamine 5'-phosphate oxidase-related, FMN-binding n=1 Tax=Hyella patelloides LEGE 07179 TaxID=945734 RepID=A0A563VW10_9CYAN)

HSP 1 Score: 119 bits (299), Expect = 1.670e-30
Identity = 72/194 (37.11%), Postives = 110/194 (56.70%), Query Frame = 0
Query:    7 WQELINCCIRQER-KPTSYFLQLASLTVSGEASCRTVVFRGWHETASSETPSLLIATDARSAKVHGLFKYPRAEACWYFLEPRVQFRIVGDVSVITSDETNHDLSALRVKQWNDLSPAARALYMCPHPGRPKEKEYSKEQIEEVANSQHPLEWFAVLSLRPERVDNVDLRAN--DRRLFELDSDGNWIENYINP 197
            W+  I+  + + R KP S ++QLA++   G  + RTVVFRG+ E    +T  L   TD RS K   L + P  E CWYF + R QFRI G+++++TS E+N DL   R   W ++S +AR  +   +PG  +E        +  +  Q P++ F +L L P++VD ++LR +  +R L+EL SD  W E  +NP
Sbjct:    8 WRSHISHALHRNRAKPYSGYVQLATIDPEGLPTNRTVVFRGFLE----QTNQLQFITDTRSQKYIHLQQKPWGEICWYFTKTREQFRIAGNLALVTSQESNSDLLKAREIMWQNISDSARIQFAWANPGEVRETTPEAFNPDPPSEKQ-PVDNFCLLLLEPKKVDRLELRGDPQNRYLYELRSDNTWEEKEVNP 196          
BLAST of Ggra2962.t1 vs. uniprot
Match: K9XLZ3 (Pyridox_oxase_2 domain-containing protein n=6 Tax=Cyanobacteria TaxID=1117 RepID=K9XLZ3_9CHRO)

HSP 1 Score: 119 bits (298), Expect = 1.960e-30
Identity = 71/194 (36.60%), Postives = 105/194 (54.12%), Query Frame = 0
Query:    6 PWQELINCCIRQERKPTSYFLQLASLTVSGEASCRTVVFRGWHETASSETPSLLIATDARSAKVHGLFKYPRAEACWYFLEPRVQFRIVGDVSVITSDETNHDLSALRVKQWNDLSPAARALYMCPHPGRPKEKEYSKEQIEEVANSQHPLEWFAVLSLRPERVDNVDLRAN--DRRLFELDSDGNWIENYINP 197
            PW+  +   + +  +P S +LQLA++ +    + RTVVFRG+ E    +T  L    DAR+ K   +   P AEACWYF++ R QFRI G ++++  D  N  L   R K W ++S AAR L+  PHPG+P++   S   +     +Q PL  F +L L P  VD++ LR    +R  +  +SD  W    INP
Sbjct:    3 PWRSPLARALHKNSQPVSRYLQLATVRLDNRPANRTVVFRGFLE----DTDQLKFIVDARTQKPEQIAYQPWAEACWYFVDTREQFRIGGYLNLVGEDHPNATLQQARYKTWREVSDAARLLFAYPHPGKPRDD--SGFDVPPPDATQ-PLPHFCLLLLEPIEVDHLKLRGEPQNRYFYTRNSDRTWSTQEINP 189          
BLAST of Ggra2962.t1 vs. uniprot
Match: D8RAV7 (Pyridoxal 5'-phosphate synthase n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RAV7_SELML)

HSP 1 Score: 119 bits (298), Expect = 2.120e-30
Identity = 70/193 (36.27%), Postives = 104/193 (53.89%), Query Frame = 0
Query:    6 PWQELINCCIRQE-RKPTSYFLQLASLTVSGEASCRTVVFRGWHETASSETPSLLIATDARSAKVHGLFKYPRAEACWYFLEPRVQFRIVGDVSVITSDETNHDLSALRVKQWNDLSPAARALYMCPHPGRPKEKEYSKEQIEEVANSQHPLEWFAVLSLRPERVDNVDLRANDRRLFELDSDGNWIENYINP 197
            PW++L+   +    R   S F QLA++  +G  + RTVVFRG+    +  T  LL  TD+RS KV      P AE C+YF +   QFRI GD+ VI+  E +     +R K W   S   R  +  PHPG+PKE    + ++E   ++Q P++ F V++L P  VD + L+ + R +F   S G+W    +NP
Sbjct:    7 PWRQLLESALESHSRLRHSRFCQLATVRANGTPANRTVVFRGF----ADGTDDLLFTTDSRSNKVQEAQHCPVAEVCYYFTDSWEQFRIHGDIEVISHTEDDPLKKEIREKSWFSSSLQTRKQFTWPHPGQPKESHPEEVRLE---STQPPVDTFCVVTLHPVEVDYLHLKQHKRIVFRSSSGGDWTSQAVNP 192          
BLAST of Ggra2962.t1 vs. uniprot
Match: A0A6P0ZEU0 (Pyridoxamine 5'-phosphate oxidase n=2 Tax=unclassified Sphaerospermopsis TaxID=2646443 RepID=A0A6P0ZEU0_9CYAN)

HSP 1 Score: 119 bits (297), Expect = 3.080e-30
Identity = 73/196 (37.24%), Postives = 109/196 (55.61%), Query Frame = 0
Query:    6 PWQELINCCIRQERKPT-SYFLQLASLTVSGEASCRTVVFRGWHETASSETPSLLIATDARSAKVHGLFKYPRAEACWYFLEPRVQFRIVGDVSVITSDETNHDLSALRVKQWNDLSPAARALYMCPHPGRPKEKEYSKEQIEEVA-NSQHPLEWFAVLSLRPERVDNVDLRAN--DRRLFELDSDGNWIENYINP 197
            PW+ LI+  + Q R    S +LQLA++  +G  + RT+VFRG+ +    +T  L   TD RSAK   + + P AE CWYF   R QFRI G + +++++   H L   R+K W +LS AAR  +  P PG  K++    E     A NS  PLE F +L L P +VD++ LR    +R ++E++    W+   +NP
Sbjct:    5 PWRSLISRALHQNRSLVYSRYLQLATVQENGLPANRTIVFRGFLD----DTNQLKFITDIRSAKAEQIPQQPAAEICWYFPNSREQFRISGQLILVSANSHPH-LQPARIKMWQELSDAARLQFAWPQPG--KQRVTKPEAFTPPAPNSSAPLETFCLLLLEPTKVDHLQLRGEPQNRTIYEINIHQEWVIQEVNP 193          
BLAST of Ggra2962.t1 vs. uniprot
Match: B2J933 (Pyridoxamine 5'-phosphate oxidase-related, FMN-binding n=12 Tax=Nostocaceae TaxID=1162 RepID=B2J933_NOSP7)

HSP 1 Score: 118 bits (296), Expect = 4.460e-30
Identity = 73/201 (36.32%), Postives = 110/201 (54.73%), Query Frame = 0
Query:    6 PWQELINCCIRQERKPT-SYFLQLASLTVSGEASCRTVVFRGWHETASSETPSLLIATDARSAKVHGLFKYPRAEACWYFLEPRVQFRIVGDVSVITSDETNHDLSALRVKQWNDLSPAARALYMCPHPGRPKEKEYSK------EQIEEVANSQHPLEWFAVLSLRPERVDNVDLRAN--DRRLFELDSDGNWIENYINP 197
            PW+  I   + + R    + +LQLA++  +G  + RT+VFRG+ E    +T  L   TD RSAK   + + P AE CWYF   R QFR+ GD+++I+SD+++ DL   R+  W +LS AAR  +  P+PG+P+ KE         + IE V N       F +L L P +VD+++LR    +R L+  +    W    INP
Sbjct:    5 PWRGAIAHALHRNRSLVYARYLQLATVQPNGRPANRTLVFRGFLE----DTNQLRFITDTRSAKADQIQQQPWAEICWYFPNTREQFRMAGDLTLISSDDSHQDLQPARIAMWQELSDAARLQFGWPYPGKPRIKESGAFEPSPPDPIEPVPN-------FCLLLLDPVQVDHLELRGEPQNRWLYHRNDQQEWSSEAINP 194          
BLAST of Ggra2962.t1 vs. uniprot
Match: A0A1B7WP38 (Pyridoxamine 5'-phosphate oxidase n=5 Tax=Nostocales TaxID=1161 RepID=A0A1B7WP38_9NOST)

HSP 1 Score: 118 bits (295), Expect = 6.130e-30
Identity = 72/195 (36.92%), Postives = 109/195 (55.90%), Query Frame = 0
Query:    6 PWQELINCCIRQERKPT-SYFLQLASLTVSGEASCRTVVFRGWHETASSETPSLLIATDARSAKVHGLFKYPRAEACWYFLEPRVQFRIVGDVSVITSDETNHDLSALRVKQWNDLSPAARALYMCPHPGRPKEKEYSKEQIEEVANSQHPLEWFAVLSLRPERVDNVDLRAN--DRRLFELDSDGNWIENYINP 197
            PW+ LI   +   R    S ++QLA++  +G  + RTVVFRG+ E     T  L   TD RSAK   + K P AE CWYF + R QFRI G++++I SD+++ +L   R+K W +LS AAR  +  PHPG+ +    +        N   P+E F +L L P +VD+++LR    +R ++  + +  W+   INP
Sbjct:    5 PWRSLITRALHHNRSLAYSRYVQLATIKENGFPANRTVVFRGFLE----HTNELKFITDIRSAKAEQISKQPAAEVCWYFPKTREQFRITGELTLI-SDDSHTNLQPARIKMWQELSDAARLQFCWPHPGKMRITT-ATAFTPPAPNPIEPVENFCLLLLAPIQVDHLELRGEPQNRWVYHRNENQEWLTEAINP 193          
The following BLAST results are available for this feature:
BLAST of Ggra2962.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IW502.990e-6854.12Pyridoxal 5'-phosphate synthase n=1 Tax=Gracilario... [more]
pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Pleurocapsa sp. PCC 7319 TaxID=118161 RepID=UPI00034C16723.050e-3642.05pyridoxamine 5'-phosphate oxidase family protein n... [more]
A0A8J6R3Q02.460e-3235.90Pyridoxamine 5'-phosphate oxidase family protein n... [more]
A0A2S6CX721.540e-3035.71Pyridoxamine 5'-phosphate oxidase n=2 Tax=Cuspidot... [more]
A0A563VW101.670e-3037.11Pyridoxamine 5'-phosphate oxidase-related, FMN-bin... [more]
K9XLZ31.960e-3036.60Pyridox_oxase_2 domain-containing protein n=6 Tax=... [more]
D8RAV72.120e-3036.27Pyridoxal 5'-phosphate synthase n=3 Tax=Selaginell... [more]
A0A6P0ZEU03.080e-3037.24Pyridoxamine 5'-phosphate oxidase n=2 Tax=unclassi... [more]
B2J9334.460e-3036.32Pyridoxamine 5'-phosphate oxidase-related, FMN-bin... [more]
A0A1B7WP386.130e-3036.92Pyridoxamine 5'-phosphate oxidase n=5 Tax=Nostocal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024015Pyridoxamine 5'-phosphate oxidase, probable FMN-dependent, Alr4036 familyTIGRFAMTIGR04026TIGR04026coord: 5..197
e-value: 4.7E-46
score: 155.0
IPR012349FMN-binding split barrelGENE3D2.30.110.10coord: 2..197
e-value: 9.8E-45
score: 154.8
IPR024624Pyridoxamine 5'-phosphate oxidase, Alr4036 family, FMN-binding domainPFAMPF12766Pyridox_oxase_2coord: 5..100
e-value: 4.0E-21
score: 75.5
IPR000659Pyridoxamine 5'-phosphate oxidasePANTHERPTHR10851PYRIDOXINE-5-PHOSPHATE OXIDASEcoord: 4..197
NoneNo IPR availablePANTHERPTHR10851:SF3PYRIDOXINE/PYRIDOXAMINE 5'-PHOSPHATE OXIDASE 2coord: 4..197
NoneNo IPR availableSUPERFAMILY50475FMN-binding split barrelcoord: 6..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000858_piloncontigtig00000858_pilon:702244..702920 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2962.t1Ggra2962.t1Gracilaria gracilis GNS1m malemRNAtig00000858_pilon 702244..702920 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2962.t1 ID=Ggra2962.t1|Name=Ggra2962.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=198bp
MCARPPWQELINCCIRQERKPTSYFLQLASLTVSGEASCRTVVFRGWHET
ASSETPSLLIATDARSAKVHGLFKYPRAEACWYFLEPRVQFRIVGDVSVI
TSDETNHDLSALRVKQWNDLSPAARALYMCPHPGRPKEKEYSKEQIEEVA
NSQHPLEWFAVLSLRPERVDNVDLRANDRRLFELDSDGNWIENYINP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024015Pyridox_Oxase_FMN-dep_Alr4036
IPR012349Split_barrel_FMN-bd
IPR024624Pyridox_Oxase_Alr4036_FMN-bd
IPR000659Pyridox_Oxase