Ggra2957.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra2957.t1
Unique Name	Ggra2957.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	315

Homology

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BLAST of Ggra2957.t1 vs. uniprot
Match: A0A2V3IW99 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW99_9FLOR)

HSP 1 Score: 203 bits (516), Expect = 4.340e-60
Identity = 160/317 (50.47%), Postives = 197/317 (62.15%), Query Frame = 0

Query:    1 MGRNRSSSYAESSDDDFALSDGDKSPAR-SRLKRPRRSAKPPRRLAVRSPQTSSFQLDXXXXXXXVICVPDSLEQDEPKQRQSSNNVESDAGPQDPSAENTMESAYKSEEPTTNGDGESKRVDVQQKCSPDENDNEHSTRSPRVLKQRKAYVISDSESEASAHENDDAYNSADDSPEEEEDDVESDFQLSPTRTAKKRKPSAPAKRATPPKKGKTQAKSXXXXTKTAAKSTKKTSAVMQRSAPKQXXXXATLSSGA---GKRRLGARIPGSSSALSSLGSSSQKARRPSSISFRAPLIRSGLSRRASVPPLHAYLKK 313
            M RNR SSYAESSD               SRLKRPRRS+  PRRLAVRSPQTSSF  +       VICVPDSLEQ++ +  + S N+     P DPSAENTMES  KSE+P    + E+  +  + K SP   D +HSTR  R  +++K Y ISDSES+AS HE+DDAYNSADDSP E   D ESDF+LSP +T KKR     AK   P K+G+TQA       K A K T++T++     APK      + S  +   GK+RLGARIP +S ALSSL +S+++ +     S  +PLIRSGLSR A+VP LHAYL K
Sbjct:    1 MVRNRPSSYAESSDXXXXXXXXXXXXXXXSRLKRPRRSSNKPRRLAVRSPQTSSFHQEENDDQ--VICVPDSLEQEDSR-LEESENIAMQKAPPDPSAENTMESVPKSEDPAVAEEKENNDLGSEIKSSPA--DEQHSTRISRSTRKQKTYAISDSESDASVHEDDDAYNSADDSPVEA--DGESDFELSPRKTTKKRTAVTQAKSPAPQKRGRTQA----TPKKLAVKRTRQTASA----APKSSIGKTSASKPSTVTGKKRLGARIPCNSFALSSLSASARRTQSTQLKSHPSPLIRSGLSRNAAVPRLHAYLGK 302

The following BLAST results are available for this feature:

BLAST of Ggra2957.t1 vs. uniprot

BLAST of Ggra2957.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IW99	4.340e-60	50.47	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..314
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..142

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000858_pilon	contig	tig00000858_pilon:688841..689875 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra2957.t1	Ggra2957.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000858_pilon 688841..689875 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra2957.t1 ID=Ggra2957.t1|Name=Ggra2957.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=315bp
MGRNRSSSYAESSDDDFALSDGDKSPARSRLKRPRRSAKPPRRLAVRSPQ
TSSFQLDDDDDDDDVICVPDSLEQDEPKQRQSSNNVESDAGPQDPSAENT
MESAYKSEEPTTNGDGESKRVDVQQKCSPDENDNEHSTRSPRVLKQRKAY
VISDSESEASAHENDDAYNSADDSPEEEEDDVESDFQLSPTRTAKKRKPS
APAKRATPPKKGKTQAKSKTTATKTAAKSTKKTSAVMQRSAPKQKKTTAT
LSSGAGKRRLGARIPGSSSALSSLGSSSQKARRPSSISFRAPLIRSGLSR
RASVPPLHAYLKKN*