Ggra2889.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2889.t1
Unique NameGgra2889.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length500
Homology
BLAST of Ggra2889.t1 vs. uniprot
Match: A0A2V3J5N4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5N4_9FLOR)

HSP 1 Score: 206 bits (524), Expect = 1.170e-59
Identity = 99/146 (67.81%), Postives = 119/146 (81.51%), Query Frame = 0
Query:  336 MTCREKDCASTLVFDWQPKSGMWKLNKFIGHSNKCFGQDVPSASSSEASARNARNCAEAYTAHQVARTLLDEAAKDPTISIKTIEGLVKAKGIYMRQPPYSHYRAIRRELRRHLSVGRATNMAALDGYAELLRKQGHYVSIFISNG 481
            MT  EK+C++ + FDWQP++ MWKLNKF GHS KCFGQD+PSA+S  + ARNA+ C  AYTAHQVART+L+ AA+DP IS+K+I  LVKAKGIY RQPPY+HYRAIRREL+RHL+V RA  MAALDGYA LLR+QGH   I I +G
Sbjct:    1 MTFPEKECSAKVAFDWQPRNNMWKLNKFAGHSIKCFGQDMPSAASGISHARNAKQCTAAYTAHQVARTILENAAEDPKISVKSIASLVKAKGIYQRQPPYTHYRAIRRELQRHLTVSRAVGMAALDGYAALLRQQGHMAWIDICDG 146          
BLAST of Ggra2889.t1 vs. uniprot
Match: A0A2V3IEH8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEH8_9FLOR)

HSP 1 Score: 150 bits (380), Expect = 2.020e-40
Identity = 75/116 (64.66%), Postives = 89/116 (76.72%), Query Frame = 0
Query:    1 MAQLHLPSTTAKVLAHIQDTDDCTTFAELFCTDAHPCISQIRKSFLRLSLLVHPDRGRSRDLDRSKECMQIIARGFEQAKNEALITAWERGKALPSAPVLEEDVYFCLRTSDREKE 116
            MA   LPSTT    +HI++TDDCTT AELFC      +S  RKSFLRLSLLVHPDRG + D +R+KECMQII+RGFEQA+NEALITAW   +A+    +L+ DVYFCLRTS+REKE
Sbjct:    1 MASSVLPSTTYTAFSHIENTDDCTTLAELFCLRTQSRLSMFRKSFLRLSLLVHPDRGGNDDPERAKECMQIISRGFEQAENEALITAWGESEAVSGDFLLKRDVYFCLRTSEREKE 116          
BLAST of Ggra2889.t1 vs. uniprot
Match: A0A2V3IGI3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGI3_9FLOR)

HSP 1 Score: 112 bits (279), Expect = 1.390e-25
Identity = 56/91 (61.54%), Postives = 68/91 (74.73%), Query Frame = 0
Query:  391 CAEAYTAHQVARTLLDEAAKDPTISIKTIEGLVKAKGIYMRQPPYSHYRAIRRELRRHLSVGRATNMAALDGYAELLRKQGHYVSIFISNG 481
            CA AYT HQVAR +L+EAA DP IS KTI  LV+AK IY RQPP SHYR++R+E+ RH +  RA +M  L+GYAEL RK G+ V I+I NG
Sbjct:   12 CAPAYTPHQVARAILNEAACDPNISAKTIGALVRAKQIYRRQPPDSHYRSVRKEIMRHFNACRAVDMVGLEGYAELFRKYGNTVRIYIING 102          
BLAST of Ggra2889.t1 vs. uniprot
Match: A0A2V3J5H0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5H0_9FLOR)

HSP 1 Score: 93.6 bits (231), Expect = 2.170e-18
Identity = 56/114 (49.12%), Postives = 75/114 (65.79%), Query Frame = 0
Query:  182 IDNELQEEELENWFGTENEANSADDLEGTG-----DEVDFNPCNYIADDAVTSFDKEFCQPSRPVRQNS---SGVSGTPQEEKRKEQKRVSNQKARQRAKDALRAERSAALRWK 287
             D ++ E+E   WF  + + +S+D   G       D+ DF+P NYIA++ ++S D +F + +R   + S   SG+ GT QEE+RKEQKR SN KARQRAKDALRAER AALRWK
Sbjct:   85 FDEDVGEKEFTEWFEEDAQESSSDXXXGGKEHEDIDDEDFDPLNYIAEEGLSSLDHDFNEANRASARRSCGTSGIPGTAQEERRKEQKRFSNLKARQRAKDALRAERCAALRWK 198          
The following BLAST results are available for this feature:
BLAST of Ggra2889.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J5N41.170e-5967.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEH82.020e-4064.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IGI31.390e-2561.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5H02.170e-1849.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000858_piloncontigtig00000858_pilon:194841..197000 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2889.t1Ggra2889.t1Gracilaria gracilis GNS1m malemRNAtig00000858_pilon 194841..197000 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2889.t1 ID=Ggra2889.t1|Name=Ggra2889.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=500bp
MAQLHLPSTTAKVLAHIQDTDDCTTFAELFCTDAHPCISQIRKSFLRLSL
LVHPDRGRSRDLDRSKECMQIIARGFEQAKNEALITAWERGKALPSAPVL
EEDVYFCLRTSDREKEYERQMHAREVHEFRKAEQRQKQSAARPSQPPSSQ
SKPPRRKKTPPRPNSSTSGFPEAACDPEISGIDNELQEEELENWFGTENE
ANSADDLEGTGDEVDFNPCNYIADDAVTSFDKEFCQPSRPVRQNSSGVSG
TPQEEKRKEQKRVSNQKARQRAKDALRAERSAALRWKPRRVCPINPQVGM
MMDARWKCEQIVRAYTAYMGIQPIINIHQTATKFTMTCREKDCASTLVFD
WQPKSGMWKLNKFIGHSNKCFGQDVPSASSSEASARNARNCAEAYTAHQV
ARTLLDEAAKDPTISIKTIEGLVKAKGIYMRQPPYSHYRAIRRELRRHLS
VGRATNMAALDGYAELLRKQGHYVSIFISNGGGDESHADKSCKTYIFSR*
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