Ggra2870.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2870.t1
Unique NameGgra2870.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length175
Homology
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BLAST of Ggra2870.t1 vs. uniprot
Match: A0A2V3IV02 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV02_9FLOR)

HSP 1 Score: 95.5 bits (236), Expect = 1.110e-19
Identity = 49/123 (39.84%), Postives = 72/123 (58.54%), Query Frame = 0 
Query:   34 QTNQADPLPEVSEAETLRLLQDSCRYVNETPPSPLLEGLKLARTWVQNLARVELVVHGDTLGAIDFLFFMSDLANNVVQPHVDAFGDATVEDVGVSTGSVL-DTMSVANRNLIIARNENTAWF 155
            QT+  +P     E   L  L ++C       P+ +   L  +R W++ L + E VV GDTLG ID + FM DLA +VV+ H++ FGDA V D GV++ +VL + ++ A R+L+ ARN  T WF
Sbjct:  516 QTDDVNPAERAEELAALTALTEACGRFGVPAPTSVTSALVSSRLWLERLGQAERVVRGDTLGLIDLMLFMGDLAVDVVERHLEVFGDAAVSD-GVTSPAVLSEGLNTAARSLLTARNRGTLWF 637
The following BLAST results are available for this feature:
BLAST of Ggra2870.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IV021.110e-1939.84Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000077_piloncontigtig00000077_pilon:293432..293956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2870.t1Ggra2870.t1Gracilaria gracilis GNS1m malemRNAtig00000077_pilon 293432..293956 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2870.t1 ID=Ggra2870.t1|Name=Ggra2870.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=175bp
MVTERHDAACSTSFAGSASSSASPLGLHHVEMHQTNQADPLPEVSEAETL
RLLQDSCRYVNETPPSPLLEGLKLARTWVQNLARVELVVHGDTLGAIDFL
FFMSDLANNVVQPHVDAFGDATVEDVGVSTGSVLDTMSVANRNLIIARNE
NTAWFWNAPFGVTFSHKAFKCCRH*
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