Ggra2858.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2858.t1
Unique NameGgra2858.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length630
Homology
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BLAST of Ggra2858.t1 vs. uniprot
Match: R7QJ27 (Thioredoxin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ27_CHOCR)

HSP 1 Score: 69.7 bits (169), Expect = 2.350e-9
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 0 
Query:   14 PLAPVLEAKKKELYSILPPEFLAELERTSAELEKLFTPTPLQLGDIAPSFTLNDALDKPVSLQDLLDSHTAVVVTWYRGDTAPY 97
            PLA  L A ++   S  PPE ++ ++ +SA L   FTPTP  LG    SF+L +A  + VSL  LL S TAVV+T+YRG   PY
Sbjct:   74 PLATELAAFEQSFRSKTPPEMISAIDASSAALAARFTPTPPSLGTKVESFSLPNAKGETVSLDSLLSSSTAVVLTYYRGSWCPY 157
The following BLAST results are available for this feature:
BLAST of Ggra2858.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QJ272.350e-946.43Thioredoxin domain-containing protein n=1 Tax=Chon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 43..102
e-value: 5.8E-6
score: 27.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000077_piloncontigtig00000077_pilon:82520..87347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2858.t1Ggra2858.t1Gracilaria gracilis GNS1m malemRNAtig00000077_pilon 82520..87347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2858.t1 ID=Ggra2858.t1|Name=Ggra2858.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=630bp
MALVSPPPLPVLPPLAPVLEAKKKELYSILPPEFLAELERTSAELEKLFT
PTPLQLGDIAPSFTLNDALDKPVSLQDLLDSHTAVVVTWYRGDTAPYKIE
PPGNPHALLVYEPVLETCLDRLSQMVVSRPGPILSSSSTLTTDASATQEY
PSLFKAAVLIVQHQGENQLGCCLLIRLLDKILVHEDEHTRDPGMRHILQS
HRQEFADIAARLFDRISEGLFSFIKPVLKFLSTTDGIRVLESGIQTLEYS
ITLRAQMAQADKFWGLYVLQGLDAIGPTFQSDLGENGFTRTFIGGKRYTI
RSLRKKLLHRNAARNPTPVANDVFTVAISYKHFWENESDRISGPDLHAIA
SFIKASSGSRIRFWVDTKLPPSNDGSFERWLRRGVTPYSRYLTLICPSAE
ASQDRFWIANEKYIGIAGKGIFYFRGDDIFFDKGHEDFKKLAKLALKLAV
GDEECPPGVRPEDQGKAEQWALGILGSQHNSRSVSFQGPRADELFRADFD
ENRAICHIQVVIGENGPQNLPLVTGKEWNKYNPLMKGNEGHQEHQMVSWI
GLVHPEEKNNVYFLHMYLLTKIKKPRLVVLRVRLRQPYDEQEGNSIEEEV
LMMMDTSELREMLPVAVPLTCDWKVFNGN*
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