Ggra2843.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2843.t1
Unique NameGgra2843.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length517
Homology
BLAST of Ggra2843.t1 vs. uniprot
Match: A0A2V3IM41 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM41_9FLOR)

HSP 1 Score: 483 bits (1244), Expect = 1.660e-164
Identity = 268/491 (54.58%), Postives = 332/491 (67.62%), Query Frame = 0
Query:    1 MCLIFTNQAYSASNTVLVLTPLATPSHLPQAWQLLYLNEMNPL----IPSDTSNPLMVVPIPNPHNMTETEFTLFSVSSSTASDIRSALNVVKSPYAPGGGHQ--PESNPNTVFGSMMVGSSSPFKPLAVQKIGGYKVTVAPSLKDLETRAPWGSYSIPLAKVEYILKDVRERYGNRRFAFVIAEGESPKFGGP--FTAGFGVMYRDGRPHGGFLPISHEPNPQFQSSSASVTSTAHMDVTIIALGAIIKPLSLLGNAKHWPLRMENVPKAGFGYSVNEVTQHVDPLSLTVRGPDQMADNAAMKWSAACQIHKALPRFGDGKVHSETFVQPEWPSVATVWTLKGLYPNRDLVARKANNTDATVVKTLYSDIDAWFRVRSHKSSTLPKPYERLDTTLALLARQLAEPGIQDRWSDSPDAVMGERVECRTVNYFNLDLDECDLDEEAYQEKDDRYRFLNISGHRKNVDTLGHTYIRISPFEGPFESIEMRTVG 483
            MC+IF +  +SAS TVL+LTP+ATP+HLPQAWQLLYLN MN        S+T NPLMVVPIPNPH MT+ +FTLF +    A  +R A++ +K  Y   G  Q  P   P+    S   GS++   PLAVQ IG YK++VAPSL DLE RAPW  YSI  ++V +IL DVR RY  + +AFVIAEG SP       F+AGFGVMYRD R  GGF P SHEP    Q+   + T    MDVT+IALGA+IKPLS+LG+ K WP+R+        G SV+EVT   +   + VRG D M      +W  A +I + LPRFG GK+H +TFVQ EWPSVATVW+L+G YPN+D++ARKA++ DA VV  LY+D+D W R R   S  +     +LD  LAL ARQLAEPG+ DR SD+P  + GERVECRTV Y NLDLD CDLDE +Y+EKD RYR+L  +G +  VDTLGH Y+RIS ++G FES+EMRTVG
Sbjct:    1 MCIIFNSHTFSASKTVLILTPIATPTHLPQAWQLLYLNSMNRFGTFGSSSETLNPLMVVPIPNPHQMTDEKFTLFEIDGHRAKKLREAVDELKDLY---GTRQSTPLFAPSAFTSSSFGGSAN---PLAVQTIGSYKISVAPSLVDLEQRAPWERYSIESSQVTHILNDVRRRYDCQPYAFVIAEGRSPPLSNANSFSAGFGVMYRDARLQGGFFPTSHEP-ALLQTDVPATT----MDVTLIALGAVIKPLSILGSQKQWPMRLAT------GKSVSEVTAEEN---IVVRGSDDMTCFYPKRWQNASEIFQTLPRFGAGKLHYKTFVQLEWPSVATVWSLQGRYPNKDVLARKASDVDAAVVNALYADVDGWARSRRLASFGISCEL-KLDFALALRARQLAEPGLVDRTSDAPKVMQGERVECRTVTYLNLDLDNCDLDELSYREKDGRYRYLMPTGRQSEVDTLGHVYLRISSYKGSFESLEMRTVG 470          
BLAST of Ggra2843.t1 vs. uniprot
Match: A0A2V3IQQ7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQQ7_9FLOR)

HSP 1 Score: 78.6 bits (192), Expect = 1.230e-13
Identity = 64/184 (34.78%), Postives = 87/184 (47.28%), Query Frame = 0
Query:  230 MDVTIIALGAIIKPLSLLGNAKHWPLRME--NVPKAGFGYSVNEVTQHVDPLSLTVRGPDQMADNAAMKWSAACQIHKALPRFGDGKVHSETFVQPEWPSVATVWTLKGLYPNRDLVARKANNTDATVVKTLYSDIDAWFRVRSHKSSTLP---KPYERLDTTLALLARQLAEPGIQDRWSDSP 408
            MDVT+IAL AII P S+LGNA + P+RME   VP A   +++        P  L  R   ++   +A      C ++   PRFG                          YPNRD + RKA+  DA VV  LY+D+  W R+R+    T     +P+      LA+LAR+LAE  I D   D+P
Sbjct:    1 MDVTLIALAAIIMPPSILGNASNCPVRMEPTQVPTADAKFTL--------PTFLYDRQMTRLGLTSAT--GLKCAVYTP-PRFGS-------------------------YPNRDALVRKASAVDAAVVNALYADVHIWTRIRNELVETKECRGQPH----LPLAVLARRLAESAIVDTLRDTP 144          
The following BLAST results are available for this feature:
BLAST of Ggra2843.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IM411.660e-16454.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQQ71.230e-1334.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 495..516

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000123_piloncontigtig00000123_pilon:441175..442725 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2843.t1Ggra2843.t1Gracilaria gracilis GNS1m malemRNAtig00000123_pilon 441175..442725 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2843.t1 ID=Ggra2843.t1|Name=Ggra2843.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=517bp
MCLIFTNQAYSASNTVLVLTPLATPSHLPQAWQLLYLNEMNPLIPSDTSN
PLMVVPIPNPHNMTETEFTLFSVSSSTASDIRSALNVVKSPYAPGGGHQP
ESNPNTVFGSMMVGSSSPFKPLAVQKIGGYKVTVAPSLKDLETRAPWGSY
SIPLAKVEYILKDVRERYGNRRFAFVIAEGESPKFGGPFTAGFGVMYRDG
RPHGGFLPISHEPNPQFQSSSASVTSTAHMDVTIIALGAIIKPLSLLGNA
KHWPLRMENVPKAGFGYSVNEVTQHVDPLSLTVRGPDQMADNAAMKWSAA
CQIHKALPRFGDGKVHSETFVQPEWPSVATVWTLKGLYPNRDLVARKANN
TDATVVKTLYSDIDAWFRVRSHKSSTLPKPYERLDTTLALLARQLAEPGI
QDRWSDSPDAVMGERVECRTVNYFNLDLDECDLDEEAYQEKDDRYRFLNI
SGHRKNVDTLGHTYIRISPFEGPFESIEMRTVGLKKEAEPLIGVKKQNEA
GHLTGLRKQTGRPVAK*
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