Ggra2841.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2841.t1
Unique NameGgra2841.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length233
Homology
BLAST of Ggra2841.t1 vs. uniprot
Match: A0A2V3IM67 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM67_9FLOR)

HSP 1 Score: 313 bits (802), Expect = 2.650e-105
Identity = 145/232 (62.50%), Postives = 189/232 (81.47%), Query Frame = 0
Query:    1 MTPGELRQVSLEYELFQSMLQSGSTLFGCINSNECSSGIVGVRGALVTLLMIKGVEQGSIPRVVLECRCSSRLAVLNTADEVADPKLTMARVQRVRDHQEDGFSERLEVSLLEWRLWNTCKEVSGLLKKLQNNRMTPRILEQELAVWAPKAYDREIKEHEWEATPEVTRQVFWDRAECFSFGILRCMEGDEDVTRKAREMTRTSERLRLALAFVQEKRAVTYAQLSLKNALD 232
            M PGE+RQ+SL+YELFQSMLQ GST FGC+++ +C +G++G+ GAL+T+L +K +EQG +PRV++ECRCS RL+VL+ A E +   L   RVQ+V+D  ED  SER EV+ LEW LW +CKEV GL++KLQN  +  R +E EL+VWAP+ YDR+I+EHEWE+TP+VTRQV+W+RAECFSFG+LR MEGDE++ RKAR MT T++RLR+AL FV EK+A TYAQLSLKNAL 
Sbjct:   23 MAPGEVRQLSLDYELFQSMLQGGSTFFGCVSAKDCKNGVLGISGALLTVLAVKSIEQGELPRVLIECRCSGRLSVLSAATESSTENLDFVRVQKVKDESEDSISERREVAQLEWALWKSCKEVVGLVRKLQNGVVKARAVELELSVWAPREYDRDIEEHEWESTPQVTRQVYWERAECFSFGVLRWMEGDEELMRKARRMTNTADRLRMALLFVDEKKAKTYAQLSLKNALS 254          
BLAST of Ggra2841.t1 vs. uniprot
Match: R7QMT2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMT2_CHOCR)

HSP 1 Score: 151 bits (381), Expect = 6.530e-42
Identity = 89/228 (39.04%), Postives = 132/228 (57.89%), Query Frame = 0
Query:   26 LFGCINSNECS-SGIVGVRGALVTLLMIKGVEQGS------------IPRVVLECRCSSRLAVLNTADEV----ADPKLTM-----ARVQRVRDHQEDGFSERLEVSLLEWRLWNTCKEVSGLLKKLQNNRMTPRILEQELAVWAPKAYDREIKEHEWEATPEVTRQVFWDRAECFSFGILRCMEGDEDVTRKAREMTRTSERLRLALAFVQEKRAVTYAQLSLKNAL 231
            ++G ++++E   SG    RG ++ +L I+ + Q S            +PR+++ CRCS R  V    D V    A P   +     A    VRD   +  ++R +++ LEW  WN C+EV+ L++KL   +    ++EQEL+VWAP  YDR+I E EW  TP  TR+VF  RAE FSFG+LRCME + +V R+AR  T T +RL +A+   ++++A   AQLSLKN L
Sbjct:    1 MYGIVHADEWDPSGERSTRGVVMNVLSIENLLQNSSAETGQEDPDKLLPRILVGCRCSGRFDVQRVVDGVLAEDARPDSIVYSHVNAMCTLVRDLGAESIADRQKLATLEWDAWNACREVASLIRKLAPPKGKAPLIEQELSVWAPADYDRDISEGEWAKTPPPTREVFCRRAESFSFGVLRCMESEGEVMREARLTTSTVQRLEMAIDMAEKRQAYVKAQLSLKNTL 228          
BLAST of Ggra2841.t1 vs. uniprot
Match: A0A1X6PFX7 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PFX7_PORUM)

HSP 1 Score: 83.6 bits (205), Expect = 1.890e-15
Identity = 71/247 (28.74%), Postives = 108/247 (43.72%), Query Frame = 0
Query:    1 MTPGELRQVSLEYELFQSMLQSGSTLFGCI---NSNECSSGIVGVR----------GALVTLLMI-----KGVEQGSIPRVVLECRCSSRLAVLNTADEVADPKLTMARVQRVRDHQEDGFSERLEVSLLEWRLWNTCKEVSGLLKKLQNNRMTPRILEQELA---VWAPKAYDREIKEHEWEATPEVTRQVFWDRAECFSFGILRCMEGDEDVTRKAREMTRTSERLRLALAFVQEKRAVTYAQLS 226
            +TPG    +++ Y     +L SG+T F  +    S+   +     R           A+VT+L +      G   G    V ++ RC+SR  +L     + DP    A    + D      ++R  ++  EW +W   + +S L  +L         L   +    VWAP AYDRE+ E EW ATP   R  +  R E FSFG+LR      +    A E+T   ERL LA   V+++R    A+L+
Sbjct:   57 LTPGATGSITVVYGELTRLLSSGATSFAQLVPAPSSAIGAAATSSRDERMPPPLAIAAVVTILSLVRVDPTGATSGDEAVVTMDVRCTSRARLL-----LYDPASVTASFVSLTDWPAWTLADRAAIAHAEWDVWTAVQGLSRLAGRLDRGGGGWCPLPTAVVAVRVWAPPAYDRELSEPEWAATPVPVRTAWQARVEAFSFGVLRVAGARGEDVDAAMELTDVRERLELAGLAVEQQRRTILARLA 298          
The following BLAST results are available for this feature:
BLAST of Ggra2841.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IM672.650e-10562.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QMT26.530e-4239.04Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6PFX71.890e-1528.74Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..29
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000123_piloncontigtig00000123_pilon:435417..436115 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2841.t1Ggra2841.t1Gracilaria gracilis GNS1m malemRNAtig00000123_pilon 435417..436115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2841.t1 ID=Ggra2841.t1|Name=Ggra2841.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=233bp
MTPGELRQVSLEYELFQSMLQSGSTLFGCINSNECSSGIVGVRGALVTLL
MIKGVEQGSIPRVVLECRCSSRLAVLNTADEVADPKLTMARVQRVRDHQE
DGFSERLEVSLLEWRLWNTCKEVSGLLKKLQNNRMTPRILEQELAVWAPK
AYDREIKEHEWEATPEVTRQVFWDRAECFSFGILRCMEGDEDVTRKAREM
TRTSERLRLALAFVQEKRAVTYAQLSLKNALD*
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