Ggra2790.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2790.t1
Unique NameGgra2790.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length213
Homology
BLAST of Ggra2790.t1 vs. uniprot
Match: A0A2V3IY69 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY69_9FLOR)

HSP 1 Score: 110 bits (274), Expect = 1.980e-26
Identity = 63/119 (52.94%), Postives = 83/119 (69.75%), Query Frame = 0
Query:   54 GLKGTGIVSRKRAHFMATQVTALQRGAKRVEELARTSKMRSTVAEEFLAVERQKSMFTFFSLPDDDVEMREKYMNAVAQKALAEVEKAAAL--QNHN---SQPYHVPNCFYFMQPEESD 167
            G+K   +V  KRAH MA QV ALQRGA+ +EELAR +K R  VA++FLAVE+Q+S+FT FSLP+ D  +R+KY+N +AQKA+ EVE++  +  Q  N   S+    PN   FMQPE SD
Sbjct:   50 GVKKGSMVGSKRAHIMANQVKALQRGAEGIEELARAAKKRKVVAKQFLAVEKQRSLFTLFSLPELDETLRKKYINDMAQKAIEEVERSVEVWSQRKNGVGSRSDCYPNSSSFMQPELSD 168          
BLAST of Ggra2790.t1 vs. uniprot
Match: A0A2V3IPE3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPE3_9FLOR)

HSP 1 Score: 105 bits (261), Expect = 1.600e-24
Identity = 66/154 (42.86%), Postives = 89/154 (57.79%), Query Frame = 0
Query:   50 SHNYGLKGTGIVSRKRAHFMATQVTALQRGAKRVEELARTSKMRSTVAEEFLAVERQKSMFTFFSLPDDDVEMREKYMNAVAQKALAEVEKAAALQNH-----NSQPYHVPNCFYFMQPEESDTIRIESSSSRSTQGSVTLTTSSVRDPPSATN 198
            S  +GLK   I+  KR +FM  QV  L++GA+ +EELA  +K R+ VAE+FLAVE+Q S+FT FSLP+    MR++Y NA+AQ A+ EV     +Q       NS  Y  PN   FMQ + S     ES + ++  G+   T     DPPSA N
Sbjct:   47 SDRFGLKNNNIIGSKRTYFMENQVKVLEQGAEGIEELAGAAKKRNVVAEQFLAVEKQWSLFTLFSLPEIYPRMRQRYPNAMAQSAIKEVGNKFEVQTQADIDINSMSYRKPNSSSFMQADRS-----ESGTQKALGGAPPPTILRAGDPPSAPN 195          
BLAST of Ggra2790.t1 vs. uniprot
Match: A0A2V3ID34 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID34_9FLOR)

HSP 1 Score: 103 bits (258), Expect = 3.490e-24
Identity = 64/129 (49.61%), Postives = 89/129 (68.99%), Query Frame = 0
Query:   54 GLKGTGIVSRKRAHFMATQVTALQRGAKRVEELARTSKMRSTVAEEFLAVERQKSMFTFFSLPDDDVEMREKYMNAVAQKALAEVEKAAAL--QNHN-----SQPYHVPNCFYFMQPEESDTIRIESSS 175
            G+K   +V  KRAH MA QV ALQRGA+ ++ELAR +K R+ VAE+FLAVE+Q+S+FT FSLP+ +  +R+KY+NA+AQKA+ E+E++  +  Q+ N     S  Y  PN   FM  E SD + I+ SS
Sbjct:   55 GVKKGSMVGSKRAHIMANQVKALQRGAEGIKELARAAKKRNVVAEQFLAVEKQRSLFTLFSLPEVNETLRKKYINAMAQKAIEEMERSVEVGSQSKNGVVPRSDCY--PNSSSFMHVELSD-LNIQKSS 180          
BLAST of Ggra2790.t1 vs. uniprot
Match: A0A2V3IK31 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK31_9FLOR)

HSP 1 Score: 107 bits (266), Expect = 5.840e-24
Identity = 65/127 (51.18%), Postives = 85/127 (66.93%), Query Frame = 0
Query:   54 GLKGTGIVSRKRAHFMATQVTALQRGAKRVEELARTSKMRSTVAEEFLAVERQKSMFTFFSLPDDDVEMREKYMNAVAQKALAEVEKAAAL--QNHNS---QPYHVPNCFYFMQPEESDTIRIESSS 175
            G+K   +V  KRA  MA QV ALQRGA+ +EELAR  K R+ VAE+FLAVE+Q+S+FT FSLP+ +  +R KY+ A+AQKA+ EVE +  +  Q  NS   +    PN   FMQPE SD + I+ SS
Sbjct:  205 GVKKGSMVGSKRAQIMANQVKALQRGAEGIEELARAEKKRNVVAEQFLAVEKQRSLFTLFSLPEVNETVRRKYIKAMAQKAIEEVESSVKVGSQRKNSIGSRSDCYPNSSSFMQPEHSD-LNIQESS 330          
The following BLAST results are available for this feature:
BLAST of Ggra2790.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IY691.980e-2652.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IPE31.600e-2442.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID343.490e-2449.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IK315.840e-2451.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000123_piloncontigtig00000123_pilon:93059..93697 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2790.t1Ggra2790.t1Gracilaria gracilis GNS1m malemRNAtig00000123_pilon 93059..93697 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2790.t1 ID=Ggra2790.t1|Name=Ggra2790.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=213bp
MSSKKPVDREETVEKTGSDSRGDGLVESGIDSNVSTSGKDEHEEPKERPS
HNYGLKGTGIVSRKRAHFMATQVTALQRGAKRVEELARTSKMRSTVAEEF
LAVERQKSMFTFFSLPDDDVEMREKYMNAVAQKALAEVEKAAALQNHNSQ
PYHVPNCFYFMQPEESDTIRIESSSSRSTQGSVTLTTSSVRDPPSATNDL
HFNAGDSLTHQG*
back to top