Ggra2686.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2686.t1
Unique NameGgra2686.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length358
Homology
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BLAST of Ggra2686.t1 vs. uniprot
Match: A0A2V3J2Y2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Y2_9FLOR)

HSP 1 Score: 437 bits (1125), Expect = 2.610e-150
Identity = 225/358 (62.85%), Postives = 277/358 (77.37%), Query Frame = 0 
Query:    1 MYPSPSMCSQKPDVKKSPLLAAAFAALTCLSIKPPAPVLAVHQDTDTTHSIQIAPEMRNNYGTMTPEGTLLRVMPEKKLQTGPGFYPSQNAPSVPSHSNTTNYQGKMNAMPEWAAVRMRHSIYPHRTTRAMALRPTALGLVSVSALTSGSVLLRNAARKRKPRVSEPMREDQEICSVVSIHIPFCVSERGSMMEKLQELENKVNLLSPDGMACAAREAARILLSEERLLEDSRKFAPKVDVFLAEDMRCAEKRFAGHVEIEAHRVDRIQNCSQ-NAPASSRKYGVVTIVVATTEGVDLACYDEEATVICRLRGALDRISRLRGGQVAGLELQWIPGVSEKRWLTRAQLCEAFPGLKVL 357
            ++PS SMCSQKP +  SPLLAAAFAAL C S++PP PV A+  +TDTT  + I+P +       T EGTLLRV+PE + +      P   +P++ S S+ TNYQG++N +P+WAAV +R +IYPHR  R  ++RP  +GLVSVSA+TSGSVL R+  RKR   V +   EDQ++CSVVSIHIPFCV ER +MM+KL+EL     +L+P+GMA A R AA +LL E RLLEDSRKFAPKVDVFLAE+M CAEKRFAGHVEIEAHR+DR++NC+Q N+  SS +YGVVT+VVATT GVDLACY+E+AT+ICRLRGALDRISRL+ GQVAGLELQW+P   EKR L RAQLCE FPGLKV+
Sbjct:   32 VHPSLSMCSQKPSLSNSPLLAAAFAALACFSVRPPMPVRAMQYETDTTAPLYISPGLHIEGTDTTHEGTLLRVLPEPQQERHSLSAPQ--SPNLSSPSSATNYQGQVNTIPDWAAVGVRRTIYPHRNPRLSSIRPATIGLVSVSAVTSGSVLFRSVTRKRIRNVHKSTLEDQDVCSVVSIHIPFCVPERATMMKKLEELAAIAIILTPEGMAEATRSAANLLLDEARLLEDSRKFAPKVDVFLAENMACAEKRFAGHVEIEAHRIDRVKNCAQKNSTKSSGEYGVVTLVVATTAGVDLACYNEDATIICRLRGALDRISRLQSGQVAGLELQWVPESEEKRSLNRAQLCEVFPGLKVV 387
The following BLAST results are available for this feature:
BLAST of Ggra2686.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J2Y22.610e-15062.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010903Protein of unknown function DUF1517PFAMPF07466DUF1517coord: 176..356
e-value: 1.3E-9
score: 38.5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..357
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:1234235..1235308 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2686.t1Ggra2686.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 1234235..1235308 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2686.t1 ID=Ggra2686.t1|Name=Ggra2686.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=358bp
MYPSPSMCSQKPDVKKSPLLAAAFAALTCLSIKPPAPVLAVHQDTDTTHS
IQIAPEMRNNYGTMTPEGTLLRVMPEKKLQTGPGFYPSQNAPSVPSHSNT
TNYQGKMNAMPEWAAVRMRHSIYPHRTTRAMALRPTALGLVSVSALTSGS
VLLRNAARKRKPRVSEPMREDQEICSVVSIHIPFCVSERGSMMEKLQELE
NKVNLLSPDGMACAAREAARILLSEERLLEDSRKFAPKVDVFLAEDMRCA
EKRFAGHVEIEAHRVDRIQNCSQNAPASSRKYGVVTIVVATTEGVDLACY
DEEATVICRLRGALDRISRLRGGQVAGLELQWIPGVSEKRWLTRAQLCEA
FPGLKVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010903DUF1517