Ggra2683.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2683.t1
Unique NameGgra2683.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length577
Homology
BLAST of Ggra2683.t1 vs. uniprot
Match: A0A2V3J5M8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5M8_9FLOR)

HSP 1 Score: 80.9 bits (198), Expect = 1.500e-12
Identity = 55/200 (27.50%), Postives = 103/200 (51.50%), Query Frame = 0
Query:   76 NAERKAQYDFFSEQLGMAIDSNLKQTKH---DRLLGDAPSTNSNIPSNEALGQNTTEAGERERVEVNPADYDLFDQLLQNTGGTGRKPVKGAKPFTSVEDREVFSRKANRAANSPQDRNIKIGNVEKGLEEDSLKASDSDSGVRSLNENMNSVSTSYELMREEFGEGFHDLGQRPPTYDSNHKKIDESPPTVLQERPKRP 272
            NAE   QY+ F + LG  ++ ++ +T +    R +  + S ++   + E     T     +++ E++P++Y +FDQLL +T G  RK VKG++P+++   +         + +S  D++ K         + S +      G + L +N  S + SY++MRE+FG+GFH+   +P      + K ++  P +L ERP+ P
Sbjct:   82 NAETNDQYEAFKKMLG--LEPHISKTGYAQPGRSVRKSGSVDAKQTTPEPTSVKTGWGESKDKPEIDPSEYAVFDQLLTSTRGPQRKLVKGSRPYSTTFHKRRADVPTEISPDSTPDQSDKDATRPHSFNDYSSE------GSKEL-DNQLSRAESYDIMREQFGDGFHENHPKPDPGRQENDKPEKKEPLILSERPRHP 272          
BLAST of Ggra2683.t1 vs. uniprot
Match: R7QEE0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEE0_CHOCR)

HSP 1 Score: 73.9 bits (180), Expect = 1.890e-10
Identity = 55/165 (33.33%), Postives = 86/165 (52.12%), Query Frame = 0
Query:  118 PSNEALGQNTTEAGERERVEVNPADYDLFDQLLQNTGGTGRKPVKGAKPFTSVEDREVFSRKANRAANSPQDRNIKIGNVEKGLEEDSLKASDSDSGVRSLNENMN-------SVSTSYELMREEFGEGFHDLGQRPPTYDSNHKKIDESPPTVLQERPKRPNRP 275
            PS++ + +   EA  +  V+++P DYD+FD+LL  +GGTGRKPVKG+K FTS             AA + ++R ++  ++    +E    + D  +    L+E MN        V  +Y++M EEFG  FH   +  P  D+   ++ E+P   LQ  P RP  P
Sbjct:   65 PSSDPVRKEVGEAAPK-TVDIDPRDYDIFDKLLHRSGGTGRKPVKGSKRFTSA------------AAVTGRERPVQ-SDIPSATDEVPDTSKDRQNEGTVLSEGMNVSAFSEEQVEDAYDVMMEEFGSDFHGRAKAKPI-DAPAAEV-EAPVPDLQAPPIRPGTP 213          
The following BLAST results are available for this feature:
BLAST of Ggra2683.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5M81.500e-1227.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEE01.890e-1033.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 495..509
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 479..493
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 518..534
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..463
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 358..374
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..551

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:1228525..1230255 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2683.t1Ggra2683.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 1228525..1230255 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2683.t1 ID=Ggra2683.t1|Name=Ggra2683.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=577bp
MMLLTFVTSPTFVTKNFVPSGRCRVHLVNHAKRKIIIVSDARSNNGKVHS
DRMQQMNSRSSSKQADDSMSSDIRNNAERKAQYDFFSEQLGMAIDSNLKQ
TKHDRLLGDAPSTNSNIPSNEALGQNTTEAGERERVEVNPADYDLFDQLL
QNTGGTGRKPVKGAKPFTSVEDREVFSRKANRAANSPQDRNIKIGNVEKG
LEEDSLKASDSDSGVRSLNENMNSVSTSYELMREEFGEGFHDLGQRPPTY
DSNHKKIDESPPTVLQERPKRPNRPENTNPNTTTAASVSSSFKVSSPVEQ
MNRNAEDPSKEKAITAASYDLMREEFGAGFRDVGQSSTSDDTGKRENAES
PPPVLQDRPKRPVHKEKTYVDNDIKSATADDINSLNTSSPPPKLNVPPQR
YFPVIEKDEAGVPLQSVSSLDDIRSGSVLPLRKGAKSSPEENNIDPNSHP
TESSRNATQGITGEDIVPKNVENIESGIDLSGRDYEVRHSTPSALENDEV
LSTSEGLDMNSRAGEKMPRLSEQGRPERSKGNNSRTNRRFRGPQRLNSEG
TEWRPNVEAYVLGHPKFVCRQITPSA*
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