Ggra2663.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2663.t1
Unique NameGgra2663.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length332
Homology
BLAST of Ggra2663.t1 vs. uniprot
Match: A0A2V3IRE8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRE8_9FLOR)

HSP 1 Score: 317 bits (813), Expect = 3.270e-104
Identity = 173/333 (51.95%), Postives = 207/333 (62.16%), Query Frame = 0
Query:    1 MAAGKSDVVRKRLMSAGLSPQICTRYVDILRSFLSARMTKIQYEHQMTKLLPNDKIHVHNSIIQDILFRAQQKRDGLRDLPLLIPLKKPAPSNRQLSKLPNGPHKKPAVTKIGIKRTHDDLDPNTVKGTPSDDTSLQNAKRQKIRAVQP--KKPPSDVDKPKLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLMVASTELSSYDMPFQPLEPGCGIDYELFIKLRHRMKRIAVEQAGMGEMHDDAVGAMTHAIEMRVKLLLQLAVRHRTARDALVPRENLQCGPVRGCDLREPLKRNTGLLGEERAVDLERLSMLL 331
            MAAGKSDVVRKRL+SAGLS  +CTRY+ +LRSFLSAR+TKIQY+ QM KLLP DKIH+HNSIIQ+ILFRAQQKRDGLRDLPLL P+KKP P +                 ++G KR  D  D   +  TP+D+ S  N   ++   +QP     P    KPK                                                 V S+ +++YD+PFQPL+PGCGIDY+LF+KLRHRM+RIAVEQ GM  + DDAVG   HAIE  VK L+ LAVR R ARD + PR+NLQCGPVRGCDLRE  +RN   LGEER +DLERLSML+
Sbjct:    1 MAAGKSDVVRKRLLSAGLSQDVCTRYIHVLRSFLSARLTKIQYQDQMAKLLPKDKIHLHNSIIQEILFRAQQKRDGLRDLPLLTPVKKPTPPSXXXXXXXXXXXXXXXXPRVGSKRPRDTTDHTGLNPTPTDNPSATNYHARQRPKLQPTINASPETDSKPKPPPPRLELPEKRSPSRKRQKPPDKVPHLPPPPPGLSAIPTRVASKPPNQVPSSSIAAYDLPFQPLQPGCGIDYQLFVKLRHRMRRIAVEQGGMSTVRDDAVGFTVHAIENHVKRLMHLAVRQRRARDGMRPRDNLQCGPVRGCDLRESARRNPAALGEERVMDLERLSMLI 333          
BLAST of Ggra2663.t1 vs. uniprot
Match: A0A5J4YNW8 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNW8_PORPP)

HSP 1 Score: 80.9 bits (198), Expect = 2.580e-13
Identity = 44/110 (40.00%), Postives = 68/110 (61.82%), Query Frame = 0
Query:    1 MAAGKSDVVRKRLMSAGLSPQICTRYVDILRSFLSARMTKIQYEHQMTKLLPNDKIHVHNSIIQDILFRAQQKRDGLRDLPLLIPLK--KPAPSNRQLSKLPNGPHKKPA 108
            M A K   + KRL +AG++ +IC +YV +L+ FLSA M+K  +E  + +LLP DKI VHN I++ IL  A  ++ G   LP+L+P K  KP  + +++  +   P  +PA
Sbjct:   11 MTAAKHVELIKRLSAAGVALEICDKYVALLKQFLSAGMSKTDFESALRRLLPKDKIRVHNQIVKWILSSALSRKSGSVQLPVLVPAKDKKPTATKKEIGTVVVTPAGRPA 120          
BLAST of Ggra2663.t1 vs. uniprot
Match: A0A7S3ELB6 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ELB6_9RHOD)

HSP 1 Score: 77.4 bits (189), Expect = 4.180e-12
Identity = 37/85 (43.53%), Postives = 61/85 (71.76%), Query Frame = 0
Query:    4 GKSDVVRKRLMSAGLSPQICTRYVDILRSFLSARMTKIQYEHQMTKLLPNDKIHVHNSIIQDILFRAQQKRDGLRDLPLLIPLKK 88
            G++D++ K+L + GL P++C  Y+ +L+ FL+A+ TKI++E  + K+LP +KI VHN +++ IL  A  K+DG+ DLP L  +KK
Sbjct:    7 GRADLL-KQLTANGLDPELCENYLHVLKQFLTAKSTKIEFEASLRKVLPANKISVHNDLVRYILRSACAKKDGVPDLPNLGAVKK 90          
BLAST of Ggra2663.t1 vs. uniprot
Match: A0A7S3EL87 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EL87_9RHOD)

HSP 1 Score: 77.4 bits (189), Expect = 5.130e-12
Identity = 37/85 (43.53%), Postives = 61/85 (71.76%), Query Frame = 0
Query:    4 GKSDVVRKRLMSAGLSPQICTRYVDILRSFLSARMTKIQYEHQMTKLLPNDKIHVHNSIIQDILFRAQQKRDGLRDLPLLIPLKK 88
            G++D++ K+L + GL P++C  Y+ +L+ FL+A+ TKI++E  + K+LP +KI VHN +++ IL  A  K+DG+ DLP L  +KK
Sbjct:    7 GRADLL-KQLTANGLDPELCENYLHVLKQFLTAKSTKIEFEASLRKVLPANKISVHNDLVRYILRSACAKKDGVPDLPNLGAVKK 90          
BLAST of Ggra2663.t1 vs. uniprot
Match: A0A1X6PH11 (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PH11_PORUM)

HSP 1 Score: 67.4 bits (163), Expect = 4.490e-9
Identity = 46/126 (36.51%), Postives = 62/126 (49.21%), Query Frame = 0
Query:  211 ASTELSSY-DMPFQPLEPGCGIDYELFIKLRHRMKRIAVEQAGMGEMH----DDAVGAMTHAIEMRVKLLLQLAVRHRTARDALVPRENLQCGPVRGC----DLREPLKRNTGLLGEERAVDLERL 327
            A  +L++Y  +PF P  PG G+D +LF++LR R+K      A  G+ H    DDAV  +  A+E  +K LL+ A R R A          +    R       LR+   RN  LLG    VDLERL
Sbjct:  180 AVADLAAYAGLPFAPTAPGGGLDVDLFLRLRARVK------AAAGDKHLGIKDDAVALLASALEAHIKTLLEAAARRRAAVAGDASNTGTEVDVYRAALAPGHLRDAALRNRRLLGRNAGVDLERL 299          
The following BLAST results are available for this feature:
BLAST of Ggra2663.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IRE83.270e-10451.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4YNW82.580e-1340.00Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S3ELB64.180e-1243.53Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S3EL875.130e-1243.53Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A1X6PH114.490e-936.51Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024738Transcriptional coactivator Hfi1/Transcriptional adapter 1PFAMPF12767SAGA-Tad1coord: 14..278
e-value: 1.3E-12
score: 48.0
IPR024738Transcriptional coactivator Hfi1/Transcriptional adapter 1PANTHERPTHR21277TRANSCRIPTIONAL ADAPTER 1coord: 11..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..126
NoneNo IPR availablePANTHERPTHR21277:SF5TRANSCRIPTIONAL ADAPTER 1coord: 11..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:1165657..1166652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2663.t1Ggra2663.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 1165657..1166652 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2663.t1 ID=Ggra2663.t1|Name=Ggra2663.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=332bp
MAAGKSDVVRKRLMSAGLSPQICTRYVDILRSFLSARMTKIQYEHQMTKL
LPNDKIHVHNSIIQDILFRAQQKRDGLRDLPLLIPLKKPAPSNRQLSKLP
NGPHKKPAVTKIGIKRTHDDLDPNTVKGTPSDDTSLQNAKRQKIRAVQPK
KPPSDVDKPKLVKPKLDLPERRSPKPKRPKAAEKTPSLPPPSPCAPAAAR
TAASRAGLMVASTELSSYDMPFQPLEPGCGIDYELFIKLRHRMKRIAVEQ
AGMGEMHDDAVGAMTHAIEMRVKLLLQLAVRHRTARDALVPRENLQCGPV
RGCDLREPLKRNTGLLGEERAVDLERLSMLL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024738Hfi1/Tada1