Ggra2649.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2649.t1
Unique NameGgra2649.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length889
Homology
BLAST of Ggra2649.t1 vs. uniprot
Match: A0A2V3IRE1 (DDT domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRE1_9FLOR)

HSP 1 Score: 521 bits (1343), Expect = 1.350e-168
Identity = 301/574 (52.44%), Postives = 388/574 (67.60%), Query Frame = 0
Query:  316 SVEEHIIDGVDSFGRCLRPAYSSTDDXXXXXDVLIINTNHSGQTSPCQPSVSRPARSPSXXXXXGRRSPSPPRRSSLHSLSIEDPHDPYPVVSRHFDGVPSTAIGDMLQVWDFITSFSKSLRLTPFKLWHFQQAIVHNSRCELIDACLLRLVQIIISDKALINELDIPDAVVRPLATTTPRNAVDTILSELPNILLFESDDDDDHLLHITVQRLRQASRKEAFYKSIDPVGKCRVLRELVDYATMTDKLRHCVSTNLEHAEEERKRAREENSALRRKYESQLRELRTELFEYKLRHGMIEPPTGSTNDKKTSTDPNAEQKNCTTGTTSEIETDVVINQDSSNNRPTSKQSHS-KNDSGSGSTSREGHTTRKEKLLQAQRERKEATERRAIERGAQAIVARMDRIRANLKSLKNIRLRRRKGSDSFPITEAHSEQLLHNGGPQNSVRTYPLGTDRSGRCYWFFFGSGRIWIEDTKDADWFSLTSMKSVHSLLRWLSPHRLEERLLKKRVRQRLRLIEEEMVKEQKCFELAEREATKERDITPRTTRAGKRRANQEAKTKKNKTVTTFLEYQNLES 888
            S +E I+DGVD+FGRCL P+Y STDD           T+HSG T+P Q + S PA          R S S PR + L  L ++    PYP VS  F+G+PS A+GDMLQVWDF+T+F+K LR+TPFKLWHFQ A+  N+RC+L+DACLLRLVQIIISDKAL+ ELDIP ++V  L   +P   VDTIL ELPNILLF+SD  DD LLH  VQ+LR ASRKEAFYK+I P+ +CR+LRELVDYATMTDK+R  +++++E   E+RKRAREE++A+RR+YES+L++LR ++ +YKL++G+ +PPTGST          AE                                HS KN S S   SREG T+R E+    QR++K    RR  ERGA+AI+ R++ +R  L+ LK +R RR+K SD    ++  +   L +    +  R YPLGTDR  RCYWF  GSGRIWIEDT+ +DW SLT+MKS+H LLRWLSPHR +E+LLKK +RQRL  IE E+ KE+K  ELAE EA      + RTTRAGKRRA+Q+A+TKKNK+V TFL+Y+NL++
Sbjct:  359 SQDEQILDGVDAFGRCLAPSYYSTDDDSDHH-----TTHHSGYTTPRQRNYSSPA--------PHRTSSSSPR-AQLRQLPVQHTRHPYPSVSDDFEGIPSIAVGDMLQVWDFVTAFAKPLRITPFKLWHFQSALARNARCKLLDACLLRLVQIIISDKALVAELDIPHSLVNALRVNSPTAVVDTILHELPNILLFQSDQHDDPLLHSCVQKLRHASRKEAFYKTIGPLARCRILRELVDYATMTDKVRQFLTSSVEQVHEQRKRAREEHTAMRRQYESELKQLRAKMADYKLKYGLKDPPTGST----------AEHDR-----------------------------HSVKNGSASTPNSREGSTSRTERPKGHQRDQKTPISRRQRERGAKAILKRIEDVRKQLQLLKTVRFRRQKPSDLLQQSDDLACDDLFDYETTDPNRAYPLGTDRDRRCYWFLRGSGRIWIEDTERSDWSSLTNMKSIHVLLRWLSPHRSDEQLLKKSLRQRLAHIETEVEKERKSIELAEMEAKSLNQTSTRTTRAGKRRASQDARTKKNKSVVTFLDYENLQT 879          
BLAST of Ggra2649.t1 vs. uniprot
Match: R7QPB5 (DDT domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPB5_CHOCR)

HSP 1 Score: 335 bits (860), Expect = 1.890e-101
Identity = 216/533 (40.53%), Postives = 316/533 (59.29%), Query Frame = 0
Query:  306 SHSAMSTDEYSVEEHIIDGVDSFGRCLRPAYSSTDDXXXXXDVLIINTNHSGQTSPCQPSVSRPARSPSXXXXXGRRSPSPPRRSSLHSLSIEDPHDPYPVVSRHFDGVPSTAIGDMLQVWDFITSFSKSLRLTPFKLWHFQQAIVHNSRCELIDACLLRLVQIIISDKALINELDIPDAVVRPLATTTPRNAVDTILSELPNILLFESDDDDDHLLHITVQRLRQASRKEAFYKSIDPVGKCRVLRELVDYATMTDKLRHCVSTNLEHAEEERKRAREENSALRRKYESQLRELRTELFEYKLRHGMIEPPTGSTNDKKTSTDPNAEQKNCTTGTTSEIETDVVINQDSSNNRPTSKQSHSKNDSGSGSTSREGHTTRKEKLLQAQRERKEATERRAIERGAQAIVARMDRIRANLKSLKNIRLRRR-----KGSDSFPITEAHSEQLLHNGGPQNSVRTYPLGTDRSGRCYWFFFGSGRIWIEDTKDADWFSLTSMKSVHSLLRWLSPHRLEERLLKKRVRQRLRLIEEEM 833
            S S +S D+ SV +    G    GR      S  D       VL+ + N SG  S  + + S    S         R     RRS +   S+ DP +PYP   + F G+P+ A+GDML +W+F+ +FS +LRL+ FKL H ++AIVHN R  L+DAC+ RL++ I++DK L++EL + + V + + + + RNA+  IL  L +IL FESD+  D  L  TV +L  +S K AFY+ I+P GK R+LRELVDY  MTDK+R+C+S ++EHAEEE+K+AREEN+A R+K E+Q++ L+ ELFE++++ G+++PP  S  +K  + D                                +K+S +  D+ +G +S+E   +RKEKL+ A++      +RRA ER A  IVAR+D+++ANLK LKN+RLR R     K  D F  + A +  +      ++ VRT+P+GTDR  R YWFF GSGRIWIEDTK  +W ++ + + ++ LL WLS  R  E+ LKKR+RQR + I  EM
Sbjct:    4 SKSPVSIDDGSVRK--AHGKQDCGRVSAETSSCHDSDV----VLVEDDNDSGTVSEREDASSIDDESVRQRERDSERY----RRSLI--ASVADPDEPYPETYQQFSGIPANAVGDMLHLWEFVNAFSGTLRLSSFKLRHLEKAIVHNERSPLLDACITRLMRSILADKELVDELGVSNTVYKAVNSKS-RNAITKILEALHHILSFESDEVYDESLLSTVNKLENSSDKWAFYRVIEPAGKLRILRELVDYVVMTDKIRNCISDSMEHAEEEKKKAREENAANRKKLETQIKRLKAELFEFRVKAGLVDPPADSEREKFQAND--------------------------------TKESTASEDN-TGDSSKENGLSRKEKLVAAKKXXXXXXDRRANERVADGIVARLDKLKANLKMLKNLRLRNRTSACAKEGDLFD-SSAPAPSMPFAAPHEDPVRTHPMGTDRKDRRYWFFEGSGRIWIEDTKSGEWSTINTSQGLNKLLCWLSTSRPGEQQLKKRIRQREQQIALEM 489          
BLAST of Ggra2649.t1 vs. uniprot
Match: A0A2J6JGL7 (DDT domain-containing protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6JGL7_LACSA)

HSP 1 Score: 65.9 bits (159), Expect = 2.530e-7
Identity = 109/450 (24.22%), Postives = 177/450 (39.33%), Query Frame = 0
Query:  396 SIEDP-HDPYPVVSRHFDGVPSTAIGDMLQVWDFITSFSKSLRLTPFKLWHFQQAIVHNSRCELIDACLLRLVQIIISDKALINELDIPDAVVRPLATTTPRNAVDTILSELPNIL--LFESDDDDDHLLHITVQRLRQASRKEAFYKSIDPVGKCRVLRELVDYATMTDKLRHCVSTNLEH----AEEERKRAREENSALRRKYESQLRELRTELFEYKLRHGMIEPPTGSTNDKKTSTDPNAEQKNCTTGTTSEIETDVVINQDSSNNRPTSKQSHSKNDSGSGSTSREGHTTRKEKLLQAQRERKEATERRAIERGAQAIVARMDRIRANLKSLKNIRLRRRKGSDSFPITEAHSEQLLHNGGPQNSVRTYPLGTDRSGRCYWFFFGSGRIWIEDTKDADWFSLTSMKSVHSLLRWLSPHRLEERLLKKRVRQRLRLIEEEMVKEQK 838
            + +DP   P P  +  F+ VP   +GD+L VWDF +S+SK L L+PF L  F+ AI H     ++         +I+   + +  L I D     +A    +  +   L    + L    E   +D+   HI        + K   Y  +D   K  +  ELV     TD +R  +   +E     A ++R  A EEN   R K E     L                              NA++ N + G  S  +   V  +      PT K+  S+N   SG         ++EK  +     K+  + +       A +    ++     S K+  + +++ +D   I +   ++ L     +  +RT PLG DR    YWFF    RI++E      W    +   + SL+  L+     ER LKK++ +R + I  EM K+ K
Sbjct:  170 AADDPVFTPRPQPNPEFN-VPMECVGDLLMVWDFCSSYSKFLNLSPFSLDDFENAICHKDNSNIL---------LIVESHSALLRLLIKDDGDYFIALQKKKRKLKISLVTWTDYLCDFLELISNDELSTHIP-------TIKRGHYSLLDIQAKINIFIELVAQVMATDVMREKLDEYIEERHELASKKRGEAIEENKKRREKKELAKAAL------------------------------NAKEHNDSVGNNSNDQNGNVAKK-LEKTSPTLKKHISEN---SGK--------KQEKXXE-----KDVKKSKVDTDSTTASI----KVSNGKGSKKSTDVEKKETNDIANIEQR--KEFLDREIEKRYIRTNPLGKDRDYNRYWFFRKESRIFVESCDHKQWGYYATKTQLESLMGSLNEKGERERALKKQLEKRYKKISSEMQKKSK 549          
BLAST of Ggra2649.t1 vs. uniprot
Match: A0A067EUH7 (DDT domain-containing protein n=8 Tax=Citrus TaxID=2706 RepID=A0A067EUH7_CITSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.370e-6
Identity = 116/469 (24.73%), Postives = 182/469 (38.81%), Query Frame = 0
Query:  396 SIEDP-HDPYPVVSRHFDGVPSTAIGDMLQVWDFITSFSKSLRLTPFKLWHFQQAIVHNSRCELIDACLLRLVQIIISDKALINELDIPDAVVRPLATTTPRNAVDTILSELPNILLFESDDDDDHLLHITVQRL--RQASRKEAFYKSIDPVGKCRVLRELVDYATMTDKLRHCVSTNLEHAEEERKRAREENSALRRKYESQLRELRTELFEYKLRHGMIEPPTGSTNDKKTSTDPNAEQKNCTTGTTSEIETDVVINQDSSNNRPTSKQSHSKNDSGSGSTSREG-HTTRKEKLLQAQRERKEATERRAIERGAQAIVARMDRIRANLKSLKNIRLRRRKGSDSFPITEAHSEQLLHNGGPQNSVRTYPLGTDRSGRCYWFFFGSGRIWIEDTKDADWFSLTSMKSVHSLLRWLSPHRLEERLLKKRVRQRLRLIEEEMVKEQKCF--ELAEREATKERDITPRTT 858
            S +DP     P+ SR F  VP   +GD+L VWDF TSFS++L L PF L  F+  + H                   S+ ALI E     A+VR L     ++       +    L+  ++   D L  I +  L     + K   Y  +D   K R+L+ELV+ A  TD  R  +  ++          REE     RK     RE + +L   K+++G       S   + +  + + E       + +EI      N   + +   SK+   + +         G   + KE L Q   ++KEATE R+ ++  +     MD+                                         +RT PLG DR    YW+F   GRI++E +    W   +S + + +L+  L+     ER L K++ +    +  E  K  K F  ++A  EA   R    R T
Sbjct:  196 SADDPVFSDRPLPSRDFS-VPMECVGDLLMVWDFCTSFSRTLHLWPFSLEDFENVVCHKE-----------------SNLALIVESH--SALVRLLIKDNRKHFWHMKNKKRKITLVNWAEYLCDFLEIIKIPELCSNMTTIKRGHYGLLDANIKLRILKELVNQAFETDVFRDKIDEHINQRRALGATRREEALEAARKE----REAKEQL---KIQNGHTSESAKSNMHESSENNYSGENGEIAEKSIAEIIASQPKNLLENKHSDASKKMAERQNVDVEVQEVNGKQLSGKELLKQMGDDKKEATEPRSKDQRREYFEREMDK---------------------------------------RVIRTNPLGKDRHYNRYWWFRRDGRIFVESSDSKQWGYYSSKEELDALMGSLNCKGERERALHKQLGKFYAKMSSEFEKRSKSFVGKIASEEAVLRRSTRVRAT 598          
BLAST of Ggra2649.t1 vs. uniprot
Match: A0A067EUA7 (DDT domain-containing protein n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067EUA7_CITSI)

HSP 1 Score: 61.2 bits (147), Expect = 6.710e-6
Identity = 106/431 (24.59%), Postives = 168/431 (38.98%), Query Frame = 0
Query:  396 SIEDP-HDPYPVVSRHFDGVPSTAIGDMLQVWDFITSFSKSLRLTPFKLWHFQQAIVHNSRCELIDACLLRLVQIIISDKALINELDIPDAVVRPLATTTPRNAVDTILSELPNILLFESDDDDDHLLHITVQRL--RQASRKEAFYKSIDPVGKCRVLRELVDYATMTDKLRHCVSTNLEHAEEERKRAREENSALRRKYESQLRELRTELFEYKLRHGMIEPPTGSTNDKKTSTDPNAEQKNCTTGTTSEIETDVVINQDSSNNRPTSKQSHSKNDSGSGSTSREG-HTTRKEKLLQAQRERKEATERRAIERGAQAIVARMDRIRANLKSLKNIRLRRRKGSDSFPITEAHSEQLLHNGGPQNSVRTYPLGTDRSGRCYWFFFGSGRIWIEDTKDADWFSLTSMKSVHSLLRWLSPHRLEERLLKKRV 822
            S +DP     P+ SR F  VP   +GD+L VWDF TSFS++L L PF L  F+  + H                   S+ ALI E     A+VR L     ++       +    L+  ++   D L  I +  L     + K   Y  +D   K R+L+ELV+ A  TD  R  +  ++          REE     RK     RE + +L   K+++G       S   + +  + + E       + +EI      N   + +   SK+   + +         G   + KE L Q   ++KEATE R+ ++  +     MD+                                         +RT PLG DR    YW+F   GRI++E +    W   +S + + +L+  L+     ER L K++
Sbjct:  196 SADDPVFSDRPLPSRDFS-VPMECVGDLLMVWDFCTSFSRTLHLWPFSLEDFENVVCHKE-----------------SNLALIVESH--SALVRLLIKDNRKHFWHMKNKKRKITLVNWAEYLCDFLEIIKIPELCSNMTTIKRGHYGLLDANIKLRILKELVNQAFETDVFRDKIDEHINQRRALGATRREEALEAARKE----REAKEQL---KIQNGHTSESAKSNMHESSENNYSGENGEIAEKSIAEIIASQPKNLLENKHSDASKKMAERQNVDVEVQEVNGKQLSGKELLKQMGDDKKEATEPRSKDQRREYFEREMDK---------------------------------------RVIRTNPLGKDRHYNRYWWFRRDGRIFVESSDSKQWGYYSSKEELDALMGSLNCKGERERALHKQL 560          
The following BLAST results are available for this feature:
BLAST of Ggra2649.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IRE11.350e-16852.44DDT domain-containing protein n=1 Tax=Gracilariops... [more]
R7QPB51.890e-10140.53DDT domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A2J6JGL72.530e-724.22DDT domain-containing protein n=3 Tax=Lactuca TaxI... [more]
A0A067EUH71.370e-624.73DDT domain-containing protein n=8 Tax=Citrus TaxID... [more]
A0A067EUA76.710e-624.59DDT domain-containing protein n=1 Tax=Citrus sinen... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 565..610
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 850..871
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 850..876
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 619..678
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 611..702
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..397
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 350..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 368..384
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 679..702
NoneNo IPR availablePANTHERPTHR15546BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2Acoord: 402..868
IPR018501DDT domainSMARTSM00571testlast3coord: 416..476
e-value: 7.4E-10
score: 48.7
IPR018501DDT domainPFAMPF02791DDTcoord: 418..473
e-value: 2.6E-11
score: 43.6
IPR018501DDT domainPROSITEPS50827DDTcoord: 416..476
score: 13.817602
IPR028941WHIM2 domainPFAMPF15613WSDcoord: 759..824
e-value: 9.9E-6
score: 26.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:1034907..1037573 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2649.t1Ggra2649.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 1034907..1037573 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2649.t1 ID=Ggra2649.t1|Name=Ggra2649.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=889bp
MDLRTILNDEQRAAPSPPPPPPPPPLLPPPPPPPPPPPALAPPQLLYAAP
VFGVQPIVPVDVVLHHAWPPPTAPSFAAPGFIAARAAPPPQCGAPLIHAP
PPAAHAHDARGVRRRAARKRARPSKRARPPPPSARLSASMQPSQHALRAS
AMRRAPSPVAAHARALKPRTSSTSCSRKHDAVVTNARGAQNSPAQMARAP
RCETATLQRRALRRHAFHSPPLSPSESPALSSRSRSRSRSRSRSRSPSLS
RSSFSSPSEPLLALPRLPPSASTLLSPPQPSSAAAPPVSPRASPHASVDS
PRKLASHSAMSTDEYSVEEHIIDGVDSFGRCLRPAYSSTDDDDDDSDVLI
INTNHSGQTSPCQPSVSRPARSPSPSPSPGRRSPSPPRRSSLHSLSIEDP
HDPYPVVSRHFDGVPSTAIGDMLQVWDFITSFSKSLRLTPFKLWHFQQAI
VHNSRCELIDACLLRLVQIIISDKALINELDIPDAVVRPLATTTPRNAVD
TILSELPNILLFESDDDDDHLLHITVQRLRQASRKEAFYKSIDPVGKCRV
LRELVDYATMTDKLRHCVSTNLEHAEEERKRAREENSALRRKYESQLREL
RTELFEYKLRHGMIEPPTGSTNDKKTSTDPNAEQKNCTTGTTSEIETDVV
INQDSSNNRPTSKQSHSKNDSGSGSTSREGHTTRKEKLLQAQRERKEATE
RRAIERGAQAIVARMDRIRANLKSLKNIRLRRRKGSDSFPITEAHSEQLL
HNGGPQNSVRTYPLGTDRSGRCYWFFFGSGRIWIEDTKDADWFSLTSMKS
VHSLLRWLSPHRLEERLLKKRVRQRLRLIEEEMVKEQKCFELAEREATKE
RDITPRTTRAGKRRANQEAKTKKNKTVTTFLEYQNLES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018501DDT_dom
IPR028941WHIM2_dom