Ggra2643.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2643.t1
Unique NameGgra2643.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length149
Homology
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BLAST of Ggra2643.t1 vs. uniprot
Match: A0A2V3IRE7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRE7_9FLOR)

HSP 1 Score: 217 bits (553), Expect = 2.140e-70
Identity = 105/148 (70.95%), Postives = 124/148 (83.78%), Query Frame = 0 
Query:    1 MADEYDPENFSVRVSQSLIKVLTGQAAEPGPIEPRNAREASLVEALRKEGRLHRISMLREMKESQXXXXXXXXXXXQEALTNSISSLDKKLNGLNFPSGSSEAPKPCAAFRERITTCYKVNGRDNPLACAGEVEAFSECAKQLSRISN 148
            MADEYDPE+FSVRVSQSL+K LTGQAAEPGP+EPRNAREASLVE+LR+E RL +++++REMKE Q           QE L  S+++LDKKL  L+FP G++ A KPCA+FRERIT CYKVNG+DNPLACAGEVEAFSECA+QLSRISN
Sbjct:    1 MADEYDPESFSVRVSQSLVKALTGQAAEPGPVEPRNAREASLVESLRRESRLQKMALIREMKELQLKEADEREKQSQEVLNQSVNALDKKLRSLHFPDGTATATKPCASFRERITACYKVNGKDNPLACAGEVEAFSECARQLSRISN 148
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BLAST of Ggra2643.t1 vs. uniprot
Match: R7QMJ3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMJ3_CHOCR)

HSP 1 Score: 160 bits (406), Expect = 5.160e-48
Identity = 80/148 (54.05%), Postives = 106/148 (71.62%), Query Frame = 0 
Query:    1 MADEYDPENFSVRVSQSLIKVLTGQAAEPGPIEPRNAREASLVEALRKEGRLHRISMLREMKESQXXXXXXXXXXXQEALTNSISSLDKKLNGLNFPSGSS-EAPKPCAAFRERITTCYKVNGRDNPLACAGEVEAFSECAKQLSRIS 147
            M +EYDP+ FS+R+S  L +VL+G+A+EPGPIEPR  REA+L+EA+R+EGR  R +M R++KE+Q           + AL  S   L +KL+ LNF + SS +  +PC   RE IT CY+VNG+DNPLAC  +VEAF+ECAKQLSRIS
Sbjct:    1 MGEEYDPDGFSLRISPGLFQVLSGRASEPGPIEPRTRREAALIEAVRREGRRERAAMFRKVKEAQLKDAHELEQAERIALEESGRKLQEKLSALNFQANSSSKTGQPCGELREAITVCYRVNGKDNPLACLADVEAFTECAKQLSRIS 148
The following BLAST results are available for this feature:
BLAST of Ggra2643.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRE72.140e-7070.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QMJ35.160e-4854.05Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012471Protein of unknown function DUF1690PFAMPF07956DUF1690coord: 43..138
e-value: 1.9E-8
score: 34.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:1017638..1018241 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2643.t1Ggra2643.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 1017638..1018241 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2643.t1 ID=Ggra2643.t1|Name=Ggra2643.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=149bp
MADEYDPENFSVRVSQSLIKVLTGQAAEPGPIEPRNAREASLVEALRKEG
RLHRISMLREMKESQSKQADEREQKAQEALTNSISSLDKKLNGLNFPSGS
SEAPKPCAAFRERITTCYKVNGRDNPLACAGEVEAFSECAKQLSRISN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012471DUF1690