Ggra2642.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2642.t1
Unique NameGgra2642.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length547
Homology
BLAST of Ggra2642.t1 vs. uniprot
Match: A0A2V3IRC4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRC4_9FLOR)

HSP 1 Score: 612 bits (1577), Expect = 2.160e-213
Identity = 318/545 (58.35%), Postives = 417/545 (76.51%), Query Frame = 0
Query:    1 MTLLRGYAALSAAVDFVEPRSVAVATRFFRAYPRFSPFRRFSLSAAYRVALYKLVIPYAVLAAVFLLATLIAVFYFCHKAASVPGVDDSNESHPDNRDNTAKLFLVFTSFLHFCIVLCVSLALANLFVIRYSVYDAKLAIQGVQRTIKYVFQTPVKALVQFATRAEKVDVSSFSADETVSAVVNLFRSNTRNFRAALRSAQVLVDNMNKIDRRITNLSSAFFWFSLVILLSVLLGLAVSLICDLSSSKSRVTRLATFSFLAVPLLAAWSHSAVSTMLAVATADFCTSLHEYHQFIDIQEMDSPEKSGKMAYDSMFDRYGLTCPSESPVTEQALQHVTTFFAASDGISDFTQAFDAISDLPNAPRWNEAKRWMRSRIRTYKGCDEQLMFAGKLAFHMCDNSPLSVVSGVSIVWLCSCAISLLFSVVIALLALGHPATEFISARELMYIYGAPKLISILEDSSKILKTQSNFQPWWKSRNELGTDGSSITSDEASRKNSSTHSSSDDDFPLPANPPGRSASYITQSDQRVT-SNSPWQGSGYESPTT 544
            MT   GYAA SAAVD++ P S+AV  RFF +YPRFS  RRFSL+  YR +LYKL IPYAV+ AV LLA L+A FYF  K A VPG DDSN+S PD RD TAKL+L+F++F++FCI+LCV+LAL NLFV+R++V +  L++QG ++ I++ FQTPV AL+QFA  A +VD+SS+     V+ V +LFRSN  +FRAA +S  V+  NMNKIDR++  LS+AFF+F+L ++LSV L LA SL+CD++  K R  RL  F+FL +PLLA+WSHSA++T+LAVATADFC SL +YH +I+ Q   + E S ++A D++FDRYGLTCPS+SP+T+ AL HVT FFAA+DGISDF +AFDAISDL  AP+WN+AKRWMR+ IR YK C++Q +FAGKLAFH C + P SV SG+SIVWLCSCA SLL ++VIALL +G P++EFISAREL+Y+YGAPKLIS+LE+S + LKT SN+QPWWKSR  + TD SS++S+E      + ++SSDD+F +  +   R+ASY + SD +V   +S W GS   S +T
Sbjct:    1 MTSPYGYAAFSAAVDYLVPHSIAVPARFFLSYPRFSDIRRFSLAQPYRQSLYKLTIPYAVVVAVLLLAALVANFYFSFKRAVVPGADDSNQSDPDKRDTTAKLYLLFSAFINFCILLCVALALVNLFVVRHAVQNVHLSVQGTRQAIRFFFQTPVDALLQFAKEAVRVDLSSYDPQHAVTQVASLFRSNLPHFRAASKSILVIFKNMNKIDRKLNQLSAAFFYFTLAVMLSVFLALACSLVCDITPPKRRRIRLFAFAFLLLPLLASWSHSAITTILAVATADFCASLQQYHVYINAQ---ATESSARIASDNIFDRYGLTCPSDSPITQDALDHVTKFFAATDGISDFPKAFDAISDLKTAPKWNQAKRWMRTNIRKYKECEQQRLFAGKLAFHTCGDHPTSVASGMSIVWLCSCATSLLLTIVIALLTMGQPSSEFISARELLYVYGAPKLISVLEESFEFLKTTSNYQPWWKSRRNVVTDMSSLSSEETGDVPHTKNTSSDDEFSMSTDRARRNASYTSNSDSKVKRESSHWSGSVSASSST 542          
The following BLAST results are available for this feature:
BLAST of Ggra2642.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRC42.160e-21358.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..506
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 516..546
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..546
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 243..253
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 433..546
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 130..220
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 78..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 221..242
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 254..273
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 410..432
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 274..409
NoneNo IPR availableTMHMMTMhelixcoord: 107..129
NoneNo IPR availableTMHMMTMhelixcoord: 251..273
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 408..430
NoneNo IPR availableTMHMMTMhelixcoord: 219..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:1015921..1017561 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2642.t1Ggra2642.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 1015921..1017561 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2642.t1 ID=Ggra2642.t1|Name=Ggra2642.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=547bp
MTLLRGYAALSAAVDFVEPRSVAVATRFFRAYPRFSPFRRFSLSAAYRVA
LYKLVIPYAVLAAVFLLATLIAVFYFCHKAASVPGVDDSNESHPDNRDNT
AKLFLVFTSFLHFCIVLCVSLALANLFVIRYSVYDAKLAIQGVQRTIKYV
FQTPVKALVQFATRAEKVDVSSFSADETVSAVVNLFRSNTRNFRAALRSA
QVLVDNMNKIDRRITNLSSAFFWFSLVILLSVLLGLAVSLICDLSSSKSR
VTRLATFSFLAVPLLAAWSHSAVSTMLAVATADFCTSLHEYHQFIDIQEM
DSPEKSGKMAYDSMFDRYGLTCPSESPVTEQALQHVTTFFAASDGISDFT
QAFDAISDLPNAPRWNEAKRWMRSRIRTYKGCDEQLMFAGKLAFHMCDNS
PLSVVSGVSIVWLCSCAISLLFSVVIALLALGHPATEFISARELMYIYGA
PKLISILEDSSKILKTQSNFQPWWKSRNELGTDGSSITSDEASRKNSSTH
SSSDDDFPLPANPPGRSASYITQSDQRVTSNSPWQGSGYESPTTDV*
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