Ggra2628.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2628.t1
Unique NameGgra2628.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length291
Homology
BLAST of Ggra2628.t1 vs. uniprot
Match: A0A2V3J3Q2 (Anaphase-promoting complex subunit 10 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3Q2_9FLOR)

HSP 1 Score: 318 bits (816), Expect = 7.220e-106
Identity = 177/295 (60.00%), Postives = 212/295 (71.86%), Query Frame = 0
Query:    1 MYHSVPHAQDEWFADSQQTIRALESLELHLRNLHTPVN----ASHPKHTSNQGYEDGDI-DEGLRDLTNQAVWTVSTAKPGNGVEQLLDGDPNTYWQSDGLQPHSITAHFSSKVKISEIHLYLNYDADESYTPAFISIMAGSNFQDLQKVKESRKIRMPKGWIVIPMGDQTDVDDECSDDESDVEREDMGQPERERIRQRXXXXXXXRTKRLIDRQAKLDEKQRKAEQDINGEFEVMKDRSVTKAHMIQIFIISNHLNGRDSHIRMVRVLGPKSQLSSRTSRFTSPEFRMYETIR 290
            M++S     +E   DSQ+TIRAL++LEL LR LH P N    +S     SN  Y + ++ +EG+RDLTNQAVWTVSTAKPGNGVEQLLDG+P TYWQSDGLQPH+ITAHFSSKVKISEI L+LN++ADESYTPAF+S+ AGSN  DL  V+ESRKIR+PKGW+ IPMG+  D+DDEC+DD+S                  XXXXXXX                  A + +NGEFE M+DRSVTK  MIQ+ II+NHLNGRDS +RMVRVLGPK+QLS  T+ FTS EF+MYETIR
Sbjct:    1 MFYSDTFTYEEGLTDSQETIRALQALELRLRGLHIPANGQLSSSASNVVSNDRYGERELGEEGMRDLTNQAVWTVSTAKPGNGVEQLLDGNPKTYWQSDGLQPHTITAHFSSKVKISEIQLHLNFEADESYTPAFVSVQAGSNLHDLYTVRESRKIRLPKGWVRIPMGEHPDIDDECTDDDSXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIEGVNGEFEAMRDRSVTKTQMIQVMIIANHLNGRDSRVRMVRVLGPKTQLSFGTTHFTSKEFQMYETIR 295          
BLAST of Ggra2628.t1 vs. uniprot
Match: A0A7S1XCD0 (Anaphase-promoting complex subunit 10 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XCD0_9RHOD)

HSP 1 Score: 152 bits (384), Expect = 1.030e-41
Identity = 90/239 (37.66%), Postives = 126/239 (52.72%), Query Frame = 0
Query:   59 LRDLTNQAVWTVSTAKPGNGVEQLLDGDPNTYWQSDGLQPHSITAHFSSKVKISEIHLYLNYDADESYTPAFISIMAGSNFQDLQKVKESRKIRMPKGWIVIPMGDQTDVDDECSDDESDVEREDMGQPERERIRQRXXXXXXXRTKRLIDRQAKLDEKQRKAEQDINGEFEVMKDR-------SVTKAHMIQIFIISNHLNGRDSHIRMVRVLGPKSQLSSRTSRFTSPEFRMYETIR 290
            LR+LTN A+W+VS+AK GNGV+ LLD   +TYWQSDG QPH I+A F  KVK+ E+ L+L+Y ADESYTP  +S+  GSN  DL+   ++ +++ P+GW+ IP                         PE                          D+++   E+D +G               +  +AHM+QI I SNH NGRDSH+R V+++GP      R + F S  ++MYETIR
Sbjct:   32 LRELTNMAMWSVSSAKAGNGVDCLLDRKKDTYWQSDGCQPHCISAQFPRKVKLVEVRLWLDYKADESYTPHRVSLRVGSNVHDLRDTADAVELQKPQGWVAIP----------------------FVSPE--------------------------DQRKNMDEEDEDGXXXXXXXXXXXXXXXAFLRAHMLQIVIQSNHQNGRDSHVRRVKIMGPGYH---RIAHFQSSAYQMYETIR 219          
BLAST of Ggra2628.t1 vs. uniprot
Match: A0A6U4IV97 (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4IV97_HEMAN)

HSP 1 Score: 150 bits (378), Expect = 7.460e-41
Identity = 95/268 (35.45%), Postives = 127/268 (47.39%), Query Frame = 0
Query:   35 TPVNASHPK-------HTSNQGYEDGDIDEGLRDLTNQAVWTVSTAKPGNGVEQLLDGDPNTYWQSDGLQPHSITAHFSSKVKISEIHLYLNYDADESYTPAFISIMAGSNFQDLQKVKESRKIRMPKGWIVIPMGDQTDVDDECSDDESDVEREDMGQPERERIRQRXXXXXXXRTKRLIDRQAKLDEKQRKAEQDINGEFEVMKDRSVTKAHMIQIFIISNHLNGRDSHIRMVRVLGPKSQLSSRTSR-----FTSPEFRMYETIR 290
            TPV   HP        H+      D +     R++   AVWT+STAKPGNGVEQL D   +TYWQSDG QPH +   F +KV I E+ +Y NY  DESYTP+ ISI AG++F DLQ+V+E   +  P GW+ IP+                                                        R+AE           D S  +A MIQI I++NH NGRDSHIR ++V GP+S ++   +      F++ EF +Y  +R
Sbjct:    6 TPVTPDHPPAVESGVDHSKTSPVLDEEDMGNKREIGGDAVWTLSTAKPGNGVEQLRDDSTDTYWQSDGPQPHLVNIQFHNKVSIKEVAIYCNYRHDESYTPSKISIRAGTHFHDLQEVQEVA-LDEPNGWLSIPL--------------------------------------------------------RRAEAGYEENESTNTDESCLRAFMIQIAILANHENGRDSHIRQIKVFGPRSDIAGCLAGEGGVGFSTQEFGLYSMVR 216          
BLAST of Ggra2628.t1 vs. uniprot
Match: L1IKK6 (Anaphase-promoting complex subunit 10 n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IKK6_GUITC)

HSP 1 Score: 137 bits (344), Expect = 2.000e-36
Identity = 82/226 (36.28%), Postives = 108/226 (47.79%), Query Frame = 0
Query:   66 AVWTVSTAKPGNGVEQLLDGDPNTYWQSDGLQPHSITAHFSSKVKISEIHLYLNYDADESYTPAFISIMAGSNFQDLQKVKESRKIRMPKGWIVIPMGDQTDVDDECSDDESDVEREDMGQPERERIRQRXXXXXXXRTKRLIDRQAKLDEKQRKAEQDINGEFEVMKDRSVTKAHMIQIFIISNHLNGRDSHIRMVRVLGPKSQ-LSSRTSRFTSPEFRMYETIR 290
            AVWT+STAKPGNGVEQL D + +TYWQSDG QPH +   F  KV I EI +Y ++  DESYTP+ ISI AG++F DLQ VKE   +  P GW+ + M                                                                            +A MIQI +++NH NGRDSHIR +++ GP+ + L   +S F++PEF  Y +IR
Sbjct:   14 AVWTLSTAKPGNGVEQLRDNNTDTYWQSDGPQPHLVNIQFHKKVSIKEIAMYCDFKLDESYTPSKISIRAGTHFHDLQDVKEIN-LEEPCGWLTVAMNS-------------------------------------------------------------------------LRAFMIQIAVLANHENGRDSHIRQIKIYGPRLEGLEVGSSSFSTPEFSSYSSIR 165          
BLAST of Ggra2628.t1 vs. uniprot
Match: A0A2P6VGN0 (Anaphase-promoting complex subunit 10 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VGN0_9CHLO)

HSP 1 Score: 137 bits (345), Expect = 2.270e-36
Identity = 78/234 (33.33%), Postives = 116/234 (49.57%), Query Frame = 0
Query:   60 RDLTNQAVWTVSTAKPGNGVEQLLDGDPNTYWQSDGLQPHSITAHFSSKVKISEIHLYLNYDADESYTPAFISIMAGSNFQDLQKVKESRKIRMPKGWIVIPMGDQTDVDDECSDDESDVEREDMGQPERERIRQRXXXXXXXRTKRLIDRQAKLDEKQRKAEQDINGEFEVMKDRSVTKAHMIQIFIISNHLNGRDSHIRMVRVLGPKSQLS---SRTSRFTSPEFRMYETIR 290
            R++   AVW+V++AKPGNGVE L DG  +TYWQSDG QPH +   F  KV +SE+ +Y +Y  DESYTP  IS+  G+ F DL+++ ++ ++  P+GW+VIP+  +                   GQPE                                               +  K  M+Q+ +++NH NGRD+HIR VRV GP+S L+    + + F SP+   +  +R
Sbjct:   15 REMGQLAVWSVTSAKPGNGVELLRDGREDTYWQSDGAQPHLVNVQFQKKVYLSEVAIYADYKLDESYTPTKISVRVGNTFADLREI-QTVELTEPQGWVVIPLTPE-------------------GQPE-----------------------------------------------AFLKGFMLQVAVLANHQNGRDTHIRQVRVFGPRSDLACPIGQEATFASPQLAAFSCVR 181          
BLAST of Ggra2628.t1 vs. uniprot
Match: A0A0U9HIY2 (Anaphase-promoting complex subunit 10 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HIY2_KLENI)

HSP 1 Score: 136 bits (343), Expect = 5.050e-36
Identity = 78/244 (31.97%), Postives = 122/244 (50.00%), Query Frame = 0
Query:   50 YEDGDIDEGLRDLTNQAVWTVSTAKPGNGVEQLLDGDPNTYWQSDGLQPHSITAHFSSKVKISEIHLYLNYDADESYTPAFISIMAGSNFQDLQKVKESRKIRMPKGWIVIPMGDQTDVDDECSDDESDVEREDMGQPERERIRQRXXXXXXXRTKRLIDRQAKLDEKQRKAEQDINGEFEVMKDRSVTKAHMIQIFIISNHLNGRDSHIRMVRVLGPKSQL---SSRTSRFTSPEFRMYETIR 290
            YE+G+ +E  R++   AVWTV++AKPGNGVE + D +  TYWQSDG QPH +   F  KVK+ +I +Y+++  DESYTP+ IS+  G++F DL+++++   +  P GWI I +           +D S V                                                           +A+++Q+ ++++H NGRD+H+R V++ GP++ +        RFTS EF MY TIR
Sbjct:    9 YEEGEDEEEKREIGKLAVWTVTSAKPGNGVELMRDDNLETYWQSDGAQPHLVNIQFQKKVKLQQIAIYIDFKLDESYTPSKISVRLGNSFHDLREIRQV-DLEEPVGWIYISLR---------PNDSSSV---------------------------------------------------------FLRAYLVQVAVLASHQNGRDTHMRQVKIYGPRTDVVRAMGHPMRFTSEEFNMYATIR 185          
BLAST of Ggra2628.t1 vs. uniprot
Match: A0A0K9QZZ0 (Anaphase-promoting complex subunit 10 n=4 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9QZZ0_SPIOL)

HSP 1 Score: 136 bits (342), Expect = 8.700e-36
Identity = 82/243 (33.74%), Postives = 117/243 (48.15%), Query Frame = 0
Query:   49 GYEDGDIDEGLRDLTNQAVWTVSTAKPGNGVEQLLDGDPNTYWQSDGLQPHSITAHFSSKVKISEIHLYLNYDADESYTPAFISIMAGSNFQDLQKVKESRKIRMPKGWIVIPMGDQTDVDDECSDDESDVEREDMGQPERERIRQRXXXXXXXRTKRLIDRQAKLDEKQRKAEQDINGEFEVMKDRSVTKAHMIQIFIISNHLNGRDSHIRMVRVLGPK-SQLSSRTSRFTSPEFRMYETIR 290
            G +D  +D  LR++T  A W+VS+ KPGNGV+ L D +  TYWQSDG QPH I   F  KVK+  I LYL++  DESYTP+ ISI AG  F +++++K    ++ P GW+ I +                      G   RE                                             +     M+QI ++SNHLNGRD+H+R ++V GP+ + +  +  +FTSPEF  Y T+R
Sbjct:   17 GSKDLIVDGDLREMTKNAAWSVSSCKPGNGVQCLRDDNSETYWQSDGAQPHLINIQFQKKVKLQLIVLYLDFKLDESYTPSKISIRAGDGFHNMKEIKAVELVK-PAGWVYISLS---------------------GNDARE---------------------------------------------TFVNTFMLQIAVLSNHLNGRDTHMRQIKVYGPRPNPVPRQPFQFTSPEFLTYSTVR 192          
BLAST of Ggra2628.t1 vs. uniprot
Match: A0A5J4XYS4 (Anaphase-promoting complex subunit 10 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XYS4_9CHLO)

HSP 1 Score: 135 bits (340), Expect = 1.370e-35
Identity = 79/240 (32.92%), Postives = 115/240 (47.92%), Query Frame = 0
Query:   55 IDEGLRDLTNQAVWTVSTAKPGNGVEQLLDGDPNTYWQSDGLQPHSITAHFSSKVKISEIHLYLNYDADESYTPAFISIMAGSNFQDLQKVKESRKIRMPKGWIVIPMGDQTDVDDECSDDESDVEREDMGQPERERIRQRXXXXXXXRTKRLIDRQAKLDEKQRKAEQDINGEFEVMKDRSVTKAHMIQIFIISNHLNGRDSHIRMVRVLGPKS----QLSSRTSRFTSPEFRMYETIR 290
            +D+  RD+   AVW+V++AKPGNGVEQL D   +TYWQSDG QPH I   F  KV++  + +YL+Y  DESYTP  +S+ AG++  DL+ +K + ++  P GW+ IP+                                                                   +V +     KA+ +Q+ +ISNH NGRD+HIR V+V GP+     +L +    F SPEF M+  +R
Sbjct:   13 VDKSCRDIGKLAVWSVTSAKPGNGVEQLCDDRDDTYWQSDGSQPHLINIQFQKKVRLQSLAIYLDYKLDESYTPNKVSVSAGTSCDDLRPIK-TVEMEEPTGWVNIPL-------------------------------------------------------------------QVPEVSEPLKAYFVQLAVISNHQNGRDTHIRQVKVYGPRQDTVQRLMAHDVGFVSPEFLMFTVVR 184          
BLAST of Ggra2628.t1 vs. uniprot
Match: A0A8J6CFZ5 (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFZ5_DIALT)

HSP 1 Score: 135 bits (341), Expect = 1.370e-35
Identity = 78/234 (33.33%), Postives = 118/234 (50.43%), Query Frame = 0
Query:   59 LRDLTNQAVWTVSTAKPGNGVEQLLDGDPNTYWQSDGLQPHSITAHFSSKVKISEIHLYLNYDADESYTPAFISIMAGSNFQDLQKVKESRKIRMPKGWIVIPMGDQTDVDDECSDDESDVEREDMGQPERERIRQRXXXXXXXRTKRLIDRQAKLDEKQRKAEQDINGEFEVMKDRSVTKAHMIQIFIISNHLNGRDSHIRMVRVLGPKSQLSSRTS--RFTSPEFRMYETIR 290
            LR++ +QAVW++STAKPGNGV+QL D   +TYWQSDG QPH +   F  K++I EI +Y +Y  DESYTP+ I+I AG+ F DLQ++K   ++  P GW  I +    + DD   +DE  +E                                                          + + IQ+ +++NH NGRD+HIR +RV  P++  S+  +    ++ +FR++  IR
Sbjct:   20 LREIGDQAVWSLSTAKPGNGVDQLRDSSTDTYWQSDGPQPHLVNIQFHKKMRIQEIAIYTDYKLDESYTPSKIAIRAGTMFHDLQQIKVE-ELSEPSGWTTISLMQPPEYDDGTPEDERALEP--------------------------------------------------------LRTYFIQLAVLANHQNGRDTHIRQIRVFSPRTGTSNDMALPEMSTLDFRIHSCIR 196          
BLAST of Ggra2628.t1 vs. uniprot
Match: W7U0V1 (Anaphase-promoting complex, subunit 10/DOC domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0V1_9STRA)

HSP 1 Score: 135 bits (340), Expect = 3.870e-35
Identity = 86/249 (34.54%), Postives = 120/249 (48.19%), Query Frame = 0
Query:   59 LRDLTNQAVWTVSTAKPGNGVEQLLDGDPNTYWQSDGLQPHSITAHFSSKVKISEIHLYLNYDADESYTPAFISIMAGSNFQDLQKVKESRKIRMPKGWIVIPMGDQTDVDDECSDDESDVEREDMGQPERERIRQRXXXXXXXRTKRLIDRQAKLDEKQRKAEQDINGEFEVMKDRSVTKAHMIQIFIISNHLNGRDSHIRMVRVLGPKSQLSSRTSR-----------------FTSPEFRMYETIR 290
            LRD+ ++AVW++STAKPGNGVEQ+ D D +TYWQSDG QPH I   F  K+ I E+ LYL+Y  DESYTP  ISI AG+ F DL ++ ++  ++ P+GW+ +P+ +                                            DR + +D        D  G         V +A  +QI II+ H NGRD+H+R V+V GP+   +S  S                  FTS E   + T+R
Sbjct:   23 LRDIGHEAVWSLSTAKPGNGVEQIRDDDMDTYWQSDGAQPHLINVQFHKKMTILEVSLYLDYSLDESYTPKKISIKAGTTFHDLVEI-QTVNLKEPQGWVKVPVRNP-----------------------------------------YADRPSGVDTVGDATAGDPVG--------GVLRAFFLQISIIAMHQNGRDTHVRQVKVYGPRYSQASFCSHSRVEGIASLDTYGTMPEFTSAELAQFSTVR 221          
The following BLAST results are available for this feature:
BLAST of Ggra2628.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3Q27.220e-10660.00Anaphase-promoting complex subunit 10 n=1 Tax=Grac... [more]
A0A7S1XCD01.030e-4137.66Anaphase-promoting complex subunit 10 n=1 Tax=Comp... [more]
A0A6U4IV977.460e-4135.45Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
L1IKK62.000e-3636.28Anaphase-promoting complex subunit 10 n=1 Tax=Guil... [more]
A0A2P6VGN02.270e-3633.33Anaphase-promoting complex subunit 10 n=1 Tax=Micr... [more]
A0A0U9HIY25.050e-3631.97Anaphase-promoting complex subunit 10 n=1 Tax=Kleb... [more]
A0A0K9QZZ08.700e-3633.74Anaphase-promoting complex subunit 10 n=4 Tax=Chen... [more]
A0A5J4XYS41.370e-3532.92Anaphase-promoting complex subunit 10 n=1 Tax=Treb... [more]
A0A8J6CFZ51.370e-3533.33Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
W7U0V13.870e-3534.54Anaphase-promoting complex, subunit 10/DOC domain ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004939APC10/DOC domainSMARTSM01337APC10_2coord: 59..289
e-value: 1.8E-71
score: 253.4
IPR004939APC10/DOC domainPFAMPF03256ANAPC10coord: 45..287
e-value: 1.5E-50
score: 171.4
IPR004939APC10/DOC domainPROSITEPS51284DOCcoord: 38..290
score: 26.994797
NoneNo IPR availableGENE3D2.60.120.260coord: 40..276
e-value: 2.9E-56
score: 191.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..53
NoneNo IPR availablePANTHERPTHR12936:SF0ANAPHASE-PROMOTING COMPLEX SUBUNIT 10coord: 43..290
IPR016901Anaphase-promoting complex subunit APC10/Doc1PANTHERPTHR12936ANAPHASE-PROMOTING COMPLEX 10coord: 43..290
IPR016901Anaphase-promoting complex subunit APC10/Doc1CDDcd08366APC10coord: 60..266
e-value: 3.56942E-62
score: 191.232
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 57..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:986511..987383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2628.t1Ggra2628.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 986511..987383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2628.t1 ID=Ggra2628.t1|Name=Ggra2628.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=291bp
MYHSVPHAQDEWFADSQQTIRALESLELHLRNLHTPVNASHPKHTSNQGY
EDGDIDEGLRDLTNQAVWTVSTAKPGNGVEQLLDGDPNTYWQSDGLQPHS
ITAHFSSKVKISEIHLYLNYDADESYTPAFISIMAGSNFQDLQKVKESRK
IRMPKGWIVIPMGDQTDVDDECSDDESDVEREDMGQPERERIRQRRAERH
RRRTKRLIDRQAKLDEKQRKAEQDINGEFEVMKDRSVTKAHMIQIFIISN
HLNGRDSHIRMVRVLGPKSQLSSRTSRFTSPEFRMYETIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004939APC_su10/DOC_dom
IPR016901APC10/Doc1
IPR008979Galactose-bd-like_sf