Ggra2609.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2609.t1
Unique NameGgra2609.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length600
Homology
BLAST of Ggra2609.t1 vs. uniprot
Match: A0A2V3J323 (DEAD-box ATP-dependent RNA helicase 18 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J323_9FLOR)

HSP 1 Score: 858 bits (2217), Expect = 5.780e-309
Identity = 437/597 (73.20%), Postives = 507/597 (84.92%), Query Frame = 0
Query:    1 MATAGPWTALRPPLAEPLVNAIHDAFRYKSMTPVQATAIPPLLTCKDVCVQAETGSGKTLSFLIPIAQEMLKKSPKPSKRIFSLVILPTRELASQVHAVACTLFHNIPGDVSPVPLVGGTDCSSAGPDVKYRDHRLIIATPGRLAAALESNQLHCNTLEMLILDEADRLLDMGFSVTLTTILTRLPRQRRTGIYSATQTDEIISLARAGLRNPVRVVVKVDSVEGKRVVPASLSSYFDMVPQAERLARVMDIIAREKGKFIVYFLTCACVEYYRRLPLNRMLSCALKNSSPGGQTEAEAQSTERKFIALHGKMNQNRRNRSLTQFVESENGVLFCTDVAARGIDIPDVDWVVQFDAPQEPDAYVHRVGRTARLGRDGKSTIFLAGSEESYVDFLKIRKCPMVKFDLFESSDTVEDLRKVVREATLGDRAILEASELAFLSYIRAYKEHRCRYLFKLDELDINSVADSFGLFRLPRFYEFKKLRSKIKPRGEGVNIREIKFKDKQKETARQKKISEARQRSNERIEKIARKGKKRKRKTKAHDTTQGKVKGNGKGKTSQVEYHIRDDEEDFSFEAMQLRKLKRGKITQETFDQLTCQD 597
            MATAGPW ALRP LA+PLV A+H+ F++ SMTPVQATAIPP+L+CKDVCVQAETGSGKTLSFLIPIAQ++L    KPSKRI+++VILPTRELA+QVH+VAC LF NIPGDV PVPLVGG +  SA PD KY+DHRLII+TPGRLAAALESN L  N+LE+LILDEADRLLDMGFSVTLT+ILTRLPRQRRTGIYSATQT+E+ISLARAGLRNPVRV++KV SV+GKR +PASL+SY+D++P  ++LAR++++++RE GK+I+YFLTCACV+YYRRLPL++MLS A  + S   Q   E +  ER FIALHGKM QNRR RSL QF  S+ GVL CTDVAARGIDIPDVDWVVQFDAPQ+PDAY+HRVGRTARLGRDGKS IFL  SEESYVDFL++RKCPMV+ +   S+  ++D+   V++ATL DRA+LEASELAFLSYIRAYKEHRCR+LFKLDELDIN VADSFGL RLPRFYEFKKLRSK KPRGEGV+IR IKFKDKQ+E ARQKKI EA Q  NERIEKI RKGKKRK   K         K  GK K SQ+E  + ++EEDFSFEAMQLRKLKRGKI+QE FD++T Q+
Sbjct:    1 MATAGPWAALRPSLAQPLVEALHNVFQHSSMTPVQATAIPPILSCKDVCVQAETGSGKTLSFLIPIAQKLLATKSKPSKRIYAIVILPTRELAAQVHSVACKLFGNIPGDVIPVPLVGGVESKSAAPDAKYKDHRLIISTPGRLAAALESNSLSHNSLEVLILDEADRLLDMGFSVTLTSILTRLPRQRRTGIYSATQTEEVISLARAGLRNPVRVIIKVASVQGKRAIPASLASYYDILPPGQKLARLIELLSRESGKYIIYFLTCACVDYYRRLPLHKMLSSAANHVSDSVQDAVEDKQNERPFIALHGKMTQNRRERSLAQFTTSKQGVLLCTDVAARGIDIPDVDWVVQFDAPQDPDAYIHRVGRTARLGRDGKSVIFLGESEESYVDFLELRKCPMVRLEHERSNALIKDVASGVKDATLADRAVLEASELAFLSYIRAYKEHRCRFLFKLDELDINGVADSFGLLRLPRFYEFKKLRSKFKPRGEGVDIRGIKFKDKQREAARQKKILEATQNCNERIEKIRRKGKKRKXXAKTEVDKPDNTKQKGKRK-SQLETGVDEEEEDFSFEAMQLRKLKRGKISQEVFDKVTGQE 596          
BLAST of Ggra2609.t1 vs. uniprot
Match: R7Q2Y6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2Y6_CHOCR)

HSP 1 Score: 412 bits (1060), Expect = 1.580e-135
Identity = 241/455 (52.97%), Postives = 298/455 (65.49%), Query Frame = 0
Query:    1 MATAGPWTALR-PPLAEPLVNAIHDAFRYKSMTPVQATAIPPLLTCKDVCVQAETGSGKTLSFLIPIAQEML-KKSPKPSKRIFSLVILPTRELASQVHAVACTLFHNIPGDVSPVPLVGGTDCSSAGPDVKYR-DHRLIIATPGRLAAALESNQLHCNTLEMLILDEADRLLDMGFSVTLTTILTRLPRQRRTGIYSATQTDEIISLARAGLRNPVRVVVKVDSVEGKRVVPASLSSYFDMVPQAERLARVMDIIARE-KGKFIVYFLTCACVEYYRRLPLNRMLSCALKNSSPGGQTEAEAQSTERKFIALHGKMNQNRRNRSLTQFVESENGVLFCTDVAARGIDIPDVDWVVQFDAPQEPDAYVHRVGRTARLGRDGKSTIFLAGSEESYVDFLKIRKCPMVKFDLFESSDTVEDLRKVVREATLGDRAILEASELAFLSYIRAYKEHRCR 451
            MATAG WTAL+   L + +  A+ +   +  MTPVQA AIPPLL+ KDVCV+AETGSGKTLS+L+PIAQ +L +K  KPS  + +LVI PTRELA+QVHAVA  LF  +PGD+ PVPL+GG   +SA PD  +R D R++IATPGRLAAAL    L+   LE+L+LDEADRLLDMGFSVTLT ILTRLPRQRRTGIYSATQT E+ +LARAGLRNPVRV +K          PASL   + +V   E+LA +  ++A   + KFIVY +TCA +                                     ALHGKM+Q +R R++ +F  S+NGVL CTDVAARGIDIPDVDWV+QFD PQ+PDAY+HRVGRTARLGR+G + +FLA SE++Y DFL +R+CP+ KF     S +            L  R +     +A  S  RA KE R R
Sbjct:   55 MATAGKWTALQGASLDKTIEQALTNTLSFPRMTPVQAAAIPPLLSSKDVCVEAETGSGKTLSYLVPIAQTVLFEKRAKPSSAVRALVIAPTRELATQVHAVAKHLFDALPGDLVPVPLIGG-GTASAAPDDSFRGDFRVLIATPGRLAAALNQGFLNVAKLEVLVLDEADRLLDMGFSVTLTDILTRLPRQRRTGIYSATQTAEVEALARAGLRNPVRVAIK--------RTPASLQCRYHIVSPREKLAHMAYLLASHPQQKFIVYLMTCAPI------------------------------------CALHGKMSQAKRERAMLKFASSKNGVLLCTDVAARGIDIPDVDWVLQFDPPQDPDAYIHRVGRTARLGREGNALLFLAPSEDTYADFLFVRRCPVSKFSELGISPS-----------PLNTRDLTTRQNVARHSMRRARKEKRGR 453          
BLAST of Ggra2609.t1 vs. uniprot
Match: A0A5J4Z1Y8 (ATP-dependent RNA helicase DDX55 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1Y8_PORPP)

HSP 1 Score: 405 bits (1040), Expect = 9.020e-130
Identity = 251/609 (41.22%), Postives = 366/609 (60.10%), Query Frame = 0
Query:    1 MATAGPWTAL-------------RPPLAEPLVNAIHDAFRYKSMTPVQATAIPPLLTCKDVCVQAETGSGKTLSFLIPIAQEML------------KKSPKPSKRIFSLVILPTRELASQVHAVACTLFHNIPG--DVSPVPLVGGTDCSSAGPDVKYRDH---RLIIATPGRLAAALESNQLHCNTLEMLILDEADRLLDMGFSVTLTTILTRLPRQRRTGIYSATQTDEIISLARAGLRNPVRVVV--------KVDSVEGKRV----VPASLSSYFDMVPQAERLARVMDIIAREKGKFIVYFLTCACVEYYRRLPLNRMLS-CALKNSSPGGQTEAEAQ---STERKFIALHGKMNQNRRNRSLTQFVESENGVLFCTDVAARGIDIPDVDWVVQFDAPQEPDAYVHRVGRTARLGRDGKSTIFLAGSEESYVDFLKIRKCP-----------MVKFDLFES-SDTVEDLRKVVREATLGDRAILEASELAFLSYIRAYKEHRCRYLFKLDELDINSVADSFGLFRLPRFYEFKKLRSKIK-PRGEGVNIREIKFKDKQKETARQKKISEARQRSNERIEKIARKGKKRKRKTKAHDTTQGKVKG 550
            MATAG W  +             R  L E L+  + +A  Y +MTPVQA+ +P +L  +DV V+AETGSGKTL+FL+P  Q +L            K +P    R+  LVI PTRELA QVH VA  +   IP    VSP+ L GG   +++   ++ +      L++ATPGRL AAL   +L    LE+LILDEADRLLD GFSVTL++I ++LP+QRRT ++SAT    +  + +AG+R+PV+V V        K  +  G  V     PA+L S +  +    +L  ++++++ + GK IVY LTCA V++   LPL   L+ C           +A+A      +R+   LHGKM Q++R  ++  F   ++GVL CTDVAARG+DIP+VDWVVQ D PQ  + +VHR+GRTARLGR GK+ +FL  SE++YV FL I++CP           +V   L ++ ++  + +R+ +R++ L DRA++E SE AFLSY+RAYK+H C  + +LD LDI +VA SF LFR+PR  EFK L+SKI+  R   V +++++FKDK +E  RQ+ ++E  +    R E  A+K   R++K +A +  + + +G
Sbjct:    1 MATAGRWEEVTVEGQHDVQTGSRRRKLDEELIQGL-EAMGYSNMTPVQASTLPQMLAMRDVAVEAETGSGKTLAFLVPAFQMLLDEEHTIRRKRRAKDNPATDARVRVLVIEPTRELAMQVHDVARKVLAAIPRLEHVSPLLLTGGRGAAASVDVLRAQSGATCELVVATPGRLDAALSGAELDTKQLELLILDEADRLLDAGFSVTLSSIFSQLPKQRRTALFSATLQGRMREIFKAGMRDPVQVSVHKQKKENLKSRTANGNEVKEWNTPATLQSMYICIDAQSKLMYLLELLSSQDGKVIVYALTCAYVQFLANLPLESCLNVCGEYLRQHKRSCDADAPRGLGGKRRLYFLHGKMAQSKRESTMQLFRADDSGVLLCTDVAARGLDIPNVDWVVQLDPPQRAEQFVHRIGRTARLGRTGKALLFLLPSEDTYVHFLAIQQCPVKNAIEMPDGPLVGAALKDNEAECADRMRRKIRKSMLEDRALMELSERAFLSYLRAYKQHECCEILRLDALDIGAVARSFFLFRMPRIAEFKTLKSKIQFERDASVQLKDVRFKDKNREAKRQRMLAEKLENPGHRFENTAQKKMNRRKKLEAREAAKKRKEG 608          
BLAST of Ggra2609.t1 vs. uniprot
Match: A0A1Y1II54 (DEAD-box ATP-dependent RNA helicase family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1II54_KLENI)

HSP 1 Score: 391 bits (1005), Expect = 5.710e-125
Identity = 248/609 (40.72%), Postives = 369/609 (60.59%), Query Frame = 0
Query:    3 TAGPWTALRPPLAEPLVNAIHDAFRYKSMTPVQATAIPPLLTCKDVCVQAETGSGKTLSFLIPIAQEMLKKSPKPSKR--IFSLVILPTRELASQVHAVACTLFHNIPGDVSPVPLVGGTDCSSAGPDVKYRDHRLIIATPGRLAAALE-SNQLHCNTLEMLILDEADRLLDMGFSVTLTTILTRLPRQRRTGIYSATQTDEIISLARAGLRNPVRVVVKV----DSVEGKRVVPASLSSYFDMVPQAERLARVMDIIARE-KG-KFIVYFLTCACVEYYR----RLPLNRMLSCALKNSSPGGQTEAEAQSTERKFIALHGKMNQNRRNRSLTQFVESENGVLFCTDVAARGIDIPDVDWVVQFDAPQEPDAYVHRVGRTARLGRDGKSTIFLAGSEESYVDFLKIRKCPMVKFDLFESSDTVEDLRKVVREATLGDRAILEASELAFLSYIRAYKEHRCRYLFKLDELDINSVADSFGLFRLPRFYEFKKLRSKIKPRGEG-----VNIREIKFKDKQKETARQKKISEARQRSNERIEKIA-RKGKKRKRKTKAHDTTQGKVKGNGKGKTSQVEYHIRDDEEDFSFEAMQLRKLKRGKITQETFDQ 592
            T+  ++ L+P L+E  +  ++    ++  TPVQA+AIP  L+ KDV V+A TGSGKTL+F++PI  EML+K     KR  + +++I PTRELA Q+++VA      + G  + + LVGGTD  +    +K     ++I TPGRL   +E ++ L    LE+L+LDEADRLLDMGF   +T IL RLP+QRRTG++SATQT+ +  LARAGLRNPVRV VKV        G+   PASLS  + +    E++ +++D +  + +G K IVYFLTCACV+Y+     RLP  + L                        +ALHG+M Q+ R ++L  F     G+LFCTDVAARG+DIP VDW+VQFD PQ+P +++HRVGRTAR+GR+G++ ++L   E++Y +FL++RK P+V+      +  +  L + +R A   DR ILE    A +S++R YKEH+C+Y+F+  +L +  +A +FGL +LPR  E +  R K K   +G     V+   ++FKD Q+E  RQ  +++       R+E+ A RKG + +RK K     + K++   K K +  +  +  D ED   E   L+KLK+GKI++  + Q
Sbjct:   10 TSTRFSDLKPALSEETLQVLNSQ-GFERTTPVQASAIPLFLSNKDVAVEAVTGSGKTLAFVLPIV-EMLRKLEGSLKRHQVGAVIISPTRELAQQIYSVAVPFVETVKGLRASL-LVGGTDVGADVRRLKEEGANVLIGTPGRLDDIMERASFLELKRLEVLVLDEADRLLDMGFQRQVTAILQRLPKQRRTGLFSATQTEAVEELARAGLRNPVRVEVKVTGSRQGAHGELKTPASLSIKYLVCEVEEKVPQLVDFLQTQARGHKCIVYFLTCACVDYWGTVLPRLPGLKKLP----------------------IVALHGRMKQSVREKALADFSAMPAGILFCTDVAARGLDIPGVDWIVQFDPPQDPSSFIHRVGRTARMGREGRAIVYLLPEEDTYAEFLRLRKVPLVELP---KTAGLPSLTESLRTAATADRDILEKGTRAMVSFVRGYKEHQCKYIFRYKDLPLGRLAMAFGLLQLPRMPELQNGRGKYKFSTDGFVPAAVDSDSVRFKDAQREKQRQATLAK-------RVEERALRKGSEHERKEKQAGAVRDKMEKRTKKKRNAEQ--LAGDLEDLDKEYKLLKKLKKGKISEREYAQ 581          
BLAST of Ggra2609.t1 vs. uniprot
Match: A0A059BI41 (Uncharacterized protein n=3 Tax=Myrtoideae TaxID=1699513 RepID=A0A059BI41_EUCGR)

HSP 1 Score: 382 bits (980), Expect = 7.650e-122
Identity = 243/610 (39.84%), Postives = 350/610 (57.38%), Query Frame = 0
Query:    3 TAGPWTALRPPLAEPLVNAIHDAFRYKSMTPVQATAIPPLLTCKDVCVQAETGSGKTLSFLIPIAQEMLKKSPKPSKR--IFSLVILPTRELASQVHAVACTLFHNIPGDVSPVPLVGGTDCSSAGPDVKYRDHRLIIATPGRLAAALES-NQLHCNTLEMLILDEADRLLDMGFSVTLTTILTRLPRQRRTGIYSATQTDEIISLARAGLRNPVRVVVKV------DSVEGKRVVPASLSS-----YFDMVPQAERLARVMDIIAREKGKFIVYFLTCACVEYYRRLPLNRMLSC--ALKNSSPGGQTEAEAQSTERKFIALHGKMNQNRRNRSLTQFVESENGVLFCTDVAARGIDIPDVDWVVQFDAPQEPDAYVHRVGRTARLGRDGKSTIFLAGSEESYVDFLKIRKCPMVKFDLFESSDTVEDLRKVVREATLGDRAILEASELAFLSYIRAYKEHRCRYLFKLDELDINSVADSFGLFRLPRFYEFK--KLRSKIKPRGEGVNIREIKFKDKQKETARQKKISEARQRSNERIEKIARKGKKRKRKTKAHDTTQGKVKGNGKGKTSQVEYHIRDDEEDFSFEAMQLRKLKRGKITQETFDQLT 594
            TA  ++ L PPL+EP++ A+  A  ++  TPVQA  IP L + KDV V A TGSGKTL+F++P+ + + + S  P KR  +  ++I PTREL+SQ++ VA      +   +  + LVGG +  +    ++     L+I TPGRL   ++  + L    LE+LILDEADRLLDMGF   +T+I++RLP+ RRTG++SATQT+ +  LA+AGLRNPVRV V+       DS   +   P+   S     Y +     +    V  +I  +  K IVYF+TCACV+Y+       +L C  ALK  S                + LHGKM Q  R ++L  F    +GVL CTDVAARG+DIP VD +VQ+D PQ+P+ +VHRVGRTARLGR G + +FL   EESYV+FL+IR+ P+ +    E +D V D+  ++R A   DR ++E    AF+SYIRAYKEH C Y+F+  EL++  +A   GL +LP   E K   L ++     E +N+ EIK+KDK +E  RQK +         R +K A +   +  K   +      V      K  +    I +DE++ + E   L+KLK+G I ++ + +LT
Sbjct:   19 TATRFSDLEPPLSEPVLEALSQA-GFEFCTPVQAATIPLLCSFKDVAVDAATGSGKTLAFVVPLVEILRRSSSAPPKRHQVLGIIISPTRELSSQIYHVAQPFISTL-SSIRSLLLVGGAEVKADMKKIEEEGANLLIGTPGRLYDIMDRMDTLDFKNLEILILDEADRLLDMGFQKQITSIVSRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRAETKQQDDSASSRDAAPSKTPSGLFLEYLECEADQKPSQLVDFLIKNKSNKIIVYFMTCACVDYW-----GAVLPCLSALKGLS---------------LVPLHGKMKQIVREKALASFTSLSSGVLLCTDVAARGLDIPGVDCIVQYDPPQDPNVFVHRVGRTARLGRQGTAIVFLLPKEESYVEFLRIRRVPLQQR---ECNDNVLDVVPLMRSAARKDRDVMEKGVRAFVSYIRAYKEHHCSYIFRWKELEVGKLAMGCGLLQLPGMPEVKHHSLSTEGFTPVEDINLEEIKYKDKSREKQRQKNL---------RAKKEAPQKDPKTHKPNKNANAASSVMRKKTAKQRRAAQTI-EDEDEMAQEYRLLKKLKKGTIDEDEYAKLT 593          
BLAST of Ggra2609.t1 vs. uniprot
Match: A0A7S3TNB1 (Hypothetical protein (Fragment) n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TNB1_EMIHU)

HSP 1 Score: 382 bits (981), Expect = 1.000e-121
Identity = 237/575 (41.22%), Postives = 331/575 (57.57%), Query Frame = 0
Query:    4 AGPWTALRPPLAEPLVNAIHDAFRYKSMTPVQATAIPPLLTCKDVCVQAETGSGKTLSFLIPIAQEMLKK-SPKPSKRIFSLVILPTRELASQVHAVACTLFHNIPGD------------VSPVPLVGGTDCSSAGPDVKYRDHRLIIATPGRLAAALESNQ--LHCNTLEMLILDEADRLLDMGFSVTLTTILTRLPRQRRTGIYSATQTDEIISLARAGLRNPVRVVVKVDSVEGKR-----------------------------------VVPASLSSYFDMVPQAERLARVMDIIA---REKGKFIVYFLTCACVEYYR----RLPLNRMLSCALKNSSPGGQTEAEAQSTERKFIALHGKMNQNRRNRSLTQFVESENG-VLFCTDVAARGIDIPDVDWVVQFDAPQEPDAYVHRVGRTARLGRDGKSTIFLAGSEESYVDFLKIRKCPMVKFDLFESSDTVEDLRKVVREATLGDRAILEASELAFLSYIRAYKEHRCRYLFKLDELDINSVADSFGLFRLPRFYEFKKLRSKIKPRGEG----------VNIREIKFKDKQKETARQ 510
            A P+ +L P L+   + A+     ++  TPVQA AIP LL  +DV VQA TGSGKTL+FL+P+ + + ++ +P   K++ +LVI PTRELA+QVHAVA                      + PV +VGGTD + +   +      ++I TPGRL   L   +  L    LE+L+LDEADRLLDMGF   L  IL+RLP+QRRTG++SATQTDE++ LARAGLRNPV+V VKV++                                        + P+SL SY  +V +AERL +++  +    RE  K +VYFLTCACV +Y     +LP       AL+ +S               F ALHGKM+  +R R+   F + + G VL CTDVAARG+D+PDVDWVVQFDAPQ+P+AYVHRVGRTAR+GR G + + L   EE+YV FL +RK P+   +  E   +   + + +    + DRA++E    A++S+++AY+EH CRY+F  D+LD+ ++A + GL RLPR  E  K R     RG+G          V++  +++KDKQ+E  RQ
Sbjct:   45 APPFASLEPALSASTLEAVAS-LGFERATPVQAAAIPRLLRHQDVAVQACTGSGKTLAFLLPLYELLARRETPLTPKQVGALVIEPTRELAAQVHAVALRFAERRAASXXXXXXXXXXXILPPVLVVGGTDLAESIASLGAAGAHVLIGTPGRLEDVLGRTERSLSLRELELLVLDEADRLLDMGFEAKLNAILSRLPKQRRTGLFSATQTDELLQLARAGLRNPVKVTVKVEAAAVPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFTLTPSSLRSYVLVVGEAERLPQLVAFLQGRLREGDKVMVYFLTCACVAFYSATLPQLP-------ALRGAS---------------FAALHGKMSPKQRRRAFDTFAQQQQGAVLLCTDVAARGLDLPDVDWVVQFDAPQDPNAYVHRVGRTARMGRSGAALLLLRPEEEAYVHFLAVRKAPV---EPREPEPSAPPVAEALTRLAVADRAVMERGAAAYVSFLKAYQEHVCRYVFVFDKLDLGALASAMGLLRLPRVRELGKKRK----RGKGSWVEFTPAAQVDLEAVRYKDKQRERLRQ 589          
BLAST of Ggra2609.t1 vs. uniprot
Match: DEAD-box ATP-dependent RNA helicase 18-like n=3 Tax=Ipomoea TaxID=4119 RepID=UPI000901C11E (DEAD-box ATP-dependent RNA helicase 18-like n=3 Tax=Ipomoea TaxID=4119 RepID=UPI000901C11E)

HSP 1 Score: 380 bits (976), Expect = 2.000e-121
Identity = 235/607 (38.71%), Postives = 358/607 (58.98%), Query Frame = 0
Query:    3 TAGPWTALRPPLAEPLVNAIHDAFRYKSMTPVQATAIPPLLTCKDVCVQAETGSGKTLSFLIPIAQEMLKKSPKPSKRIFSLVILPTRELASQVHAVACTLFHNIPGDVSPVPLVGGTDCSSAGPDVKYRDHRLIIATPGRLAAALES-NQLHCNTLEMLILDEADRLLDMGFSVTLTTILTRLPRQRRTGIYSATQTDEIISLARAGLRNPVRVVVKV------DSVEGKRVV----PASLSSYFDMVPQAERLARVMDIIAREK-GKFIVYFLTCACVEYYRRLPLNRMLSCALKNSSPGGQTEAEAQSTERKFIALHGKMNQNRRNRSLTQFVESENGVLFCTDVAARGIDIPDVDWVVQFDAPQEPDAYVHRVGRTARLGRDGKSTIFLAGSEESYVDFLKIRKCPMVKFDLF-ESSDTVEDLRKVVREATLGDRAILEASELAFLSYIRAYKEHRCRYLFKLDELDINSVADSFGLFRLPRFYEFK--KLRSKIKPRGEGVNIREIKFKDKQKETARQKKISEARQRSNERIEKIARKGKKRKRKTKAHDTTQGKVKGNGKGKTSQVEYHIRDDEEDFSFEAMQLRKLKRGKITQETFDQLT 594
            TA  ++ L+PPL++P++ A+ +   +   TPVQA  IP L + KDV V A TGSGKTL+F++P+ + + + SP    ++  +VI PTREL+SQ+  VA      +P ++ PV L+GG +  +    ++     L+I TPGRL   +E  + L     E+LILDEADRLLDMGF   + +I++RLP+ RRTG++SATQT+ +  L++AGLRNPVRV V+       DS    ++     PA L   + +    ++ +++ D++ R K  K I+YF+TCACV+Y+  + L R+ S  LK  S                I LHGKM Q  R ++L+ F    +G+L CTDVAARG+DIP VD ++Q+D PQ+PD +VHRVGRTARLGR G ++IFL+  EE+YVDFL+IR+ P+   + F E+ D V ++R   ++    DR ++E    AF+SYIRAYKEH C Y+F+  EL+I  +   +GL +LP   E K   L ++     + +N+ EIK+KDK +E  R+K +   +    + + K  R            D++  K +   +    +      +D+++ + E   L+KLK+G I +  F +LT
Sbjct:    9 TATRFSDLKPPLSQPVLEALTNG-GFDFCTPVQAATIPLLCSHKDVAVDAATGSGKTLAFVVPLVEIIRRSSPPKPHQVMGVVISPTRELSSQIFQVAQPFISTLP-NIKPVLLLGGAEVKTDMKKIEEEGANLLIGTPGRLFDIMERMDMLDFRNFEVLILDEADRLLDMGFQRQIHSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKSLNDSTSTGQLASSRTPAGLQDEYLVCEADKKSSQLADLLIRNKCNKVIIYFMTCACVDYWG-VVLPRISS--LKKLS---------------LIPLHGKMKQAVREKALSTFTSLSSGILLCTDVAARGLDIPGVDCIIQYDPPQDPDVFVHRVGRTARLGRQGHASIFLSPKEEAYVDFLRIRRIPLEARECFNEAPDIVSEIRLAAKK----DRDVMEKGIRAFVSYIRAYKEHHCSYIFRWKELEIGKLGMGYGLLQLPSVPEVKHHSLSTESFIPVKDINLEEIKYKDKSREKQRKKNLEAKKAVKQQEMRKPKR------------DSSLSKAEMKKQTAKKRRATQTLEDDDEMAKEYRLLKKLKKGAIDETEFAKLT 579          
BLAST of Ggra2609.t1 vs. uniprot
Match: A0A507EGE2 (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507EGE2_9FUNG)

HSP 1 Score: 382 bits (980), Expect = 3.330e-121
Identity = 226/549 (41.17%), Postives = 330/549 (60.11%), Query Frame = 0
Query:    1 MATAGPWTALRPPLAEPLVNAIHDAFRYKSMTPVQATAIPPLLTCKDVCVQAETGSGKTLSFLIPIAQEMLKKSPKP----SKRIFSLVILPTRELASQVHAVACTLFHNI------------------PGDVSPVP---LVGGTDCSSAGPDVKYRDHRLIIATPGRLAAALESNQLHCNT-LEMLILDEADRLLDMGFSVTLTTILTRLPRQRRTGIYSATQTDEIISLARAGLRNPVRVVVKVDSV--EGKRVVPASLSSYFDMVPQAERLARVMDIIAREKGK-FIVYFLTCACVEYYRRLPLNRMLSCALKNSSPGGQTEAEAQSTERKFIALHGKMNQNRRNRSLTQFVES-ENGVLFCTDVAARGIDIPDVDWVVQFDAPQEPDAYVHRVGRTARLGRDGKSTIFLAGSEESYVDFLKIRKCPMVKFDLFESSDTVE-----DLRKVVREATLGDRAILEASELAFLSYIRAYKEHRCRYLFKLDELDINSVADSFGLFRLPRFYEFKKLRSKIKPRGEGVNIREIKFKDKQKETARQKKIS 514
            +A AG W AL PPL+ P+++A+     +  MTPVQA+ +P  +  KDV V+A TGSGKTLSF+IPI + +L++          +I +++I PTRELA Q++ VA T    I                   G +  +     +GG +        +    +L+I TPGRL   L+   +     LE+L+LDEADRLLDMGF  TLT+I+ RLP+QRRTG++SAT +D +  L R GLRNPVRV VKV+S+  + ++  P+SL   + +    ++L ++M  + REK K FIVYF TCACV+Y+ ++  N      LK  S               F +LHGKM+  RR     +F  +  + +L CTDVAARG+DIPDVD+V+QFD PQ+P ++ HR GRTARLGR+GK+ +FL   E++YV+FL+IRK PMV+  L   ++  +     D+ + VR+A   DR + E S  AF+S++R+Y EH+  Y+F+  ++D+ +VA +FGL +LP+  E K L+   +P    + I  IK+KDK +E  RQ KI+
Sbjct:    4 IANAGRWDALNPPLSAPILDALRT-LSFTQMTPVQASTVPLFMKNKDVVVEAVTGSGKTLSFVIPILEMLLRRHRDGRGLLKNQIGAVIISPTRELARQIYDVATTFLDAINTAATAELEQSENQDDDFQGTIPALQHMLFIGGNNVQEDVQRFQREGAQLVIGTPGRLDDLLKRGAVFSTKELEVLVLDEADRLLDMGFEHTLTSIIQRLPKQRRTGLFSATMSDALNQLVRVGLRNPVRVQVKVESLTKQEEQCTPSSLEIGYVICTPEQKLVQLMRFLKREKDKKFIVYFATCACVDYFFKVLSNLR---DLKEFS---------------FHSLHGKMDPKRREAVYKKFTSAPSSSILVCTDVAARGLDIPDVDYVIQFDPPQDPKSFAHRCGRTARLGREGKAVVFLTAQEDTYVEFLRIRKVPMVEHPLISDAEDGQKWAENDILEAVRKANTKDRDLYERSTKAFVSWVRSYSEHQANYIFRFKDVDVAAVARAFGLLKLPKMPELKPLKIDFQP--TDIKIDSIKYKDKAREKQRQAKIA 531          
BLAST of Ggra2609.t1 vs. uniprot
Match: DEAD-box ATP-dependent RNA helicase 18 isoform X1 n=3 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF936F7 (DEAD-box ATP-dependent RNA helicase 18 isoform X1 n=3 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF936F7)

HSP 1 Score: 379 bits (974), Expect = 4.490e-121
Identity = 238/608 (39.14%), Postives = 360/608 (59.21%), Query Frame = 0
Query:   10 LRPPLAEPLVNAIHDAFRYKSMTPVQATAIPPLLTCKDVCVQAETGSGKTLSFLIPIAQEMLKKSPKPSK--RIFSLVILPTRELASQVHAVACTLFHNIPGDVSPVPLVGGTDCSSAGPDVKYRDHRLIIATPGRLAAALES-NQLHCNTLEMLILDEADRLLDMGFSVTLTTILTRLPRQRRTGIYSATQTDEIISLARAGLRNPVRVVVKVDS----------VEGKRVVPASLSSYFDMVPQAERLARVMDIIAREKGK-FIVYFLTCACVEYYRRLPLNRMLSCALKNSSPGGQTEAEAQSTERKFIALHGKMNQNRRNRSLTQFVESENGVLFCTDVAARGIDIPDVDWVVQFDAPQEPDAYVHRVGRTARLGRDGKSTIFLAGSEESYVDFLKIRKCPMVKFDLFESSDTVEDLRKVVREATLGDRAILEASELAFLSYIRAYKEHRCRYLFKLDELDINSVADSFGLFRLPRFYEFKK--LRSKIKPRGEGVNIREIKFKDKQKETARQKKISEARQRSNERIEKIARKGKKRKRKTKAHDT--TQGKVKGNGKGKTSQVEYHIRDDEEDFSFEAMQLRKLKRGKITQETFDQLTCQDKL 599
            L+PPL+EP++ A+  +  ++  TPVQA  IP L + KDV V A TGSGKTL+FL+P+  E+L+++  P K  ++  +VI PTREL+SQ++ VA  L   +  +V  + LVGG +  S    ++     L+I TPGRL   +E  + L    LE+LILDEADRLLDMGF   ++ I++RLP+ RRTG++SATQT+ +  L++AGLRNPVRV V+ ++                 P+ L   +    + ++ ++++D++ +   K  I+YF+TCACV+Y+  + L R+    LK  S                I LHGKM Q  R ++L  F+   +G+L CTDVAARG+DIP VD ++Q+D PQ+P+ +VHRVGRTARLG+ G S +FL+  EE+YV+FL+IR+ P+ +    + +D V D+   +R A   DR ++E    AF+SYIRAYKEH C Y+F+  EL+I  +A  +GL +LP   E K   L ++     E +N+ +IK+ DK +E  R+K + +AR+ + ++  K            K H T   +  V      K  +    I DD+E  + +   L+KLKRG I +  F +LT  ++L
Sbjct:   17 LKPPLSEPVLEALTQS-GFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFLVPVV-EILRRATSPPKPHQVMGMVISPTRELSSQIYHVARPLISTL-SNVKAMLLVGGVEVKSDMKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILILDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAESQPGSASSQTPASSKTPSGLQLEYLECEEDKKPSQLVDLLIKNNSKKIIIYFMTCACVDYWG-VVLPRL--AVLKGLS---------------LIPLHGKMKQTAREKALASFISLSSGILLCTDVAARGLDIPGVDCIIQYDPPQDPNVFVHRVGRTARLGKQGSSIVFLSPKEEAYVEFLRIRRVPLQEK---KCTDNVSDVVPQIRSAAKKDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEIGKLAMGYGLLQLPSMSEVKNHSLSTEGFTPVEDINLEDIKYMDKSREKQRKKNL-QARKEAQQQDPKSQ----------KPHKTPKAESSVMRKKTAKQRRASQAIEDDDE-LARDYRLLKKLKRGNIDESEFAKLTGTEEL 588          
BLAST of Ggra2609.t1 vs. uniprot
Match: A0A1U8P5P0 (DEAD-box ATP-dependent RNA helicase 18-like n=22 Tax=Gossypium TaxID=3633 RepID=A0A1U8P5P0_GOSHI)

HSP 1 Score: 379 bits (974), Expect = 5.050e-121
Identity = 223/522 (42.72%), Postives = 321/522 (61.49%), Query Frame = 0
Query:   10 LRPPLAEPLVNAIHDAFRYKSMTPVQATAIPPLLTCKDVCVQAETGSGKTLSFLIPIAQEMLKKSPKPSKR--IFSLVILPTRELASQVHAVACTLFHNIPGDVSPVPLVGGTDCSSAGPDVKYRDHRLIIATPGRLAAALES-NQLHCNTLEMLILDEADRLLDMGFSVTLTTILTRLPRQRRTGIYSATQTDEIISLARAGLRNPVRVVVKVD------SVEGKRVV----PASLSSYFDMVPQAERLARVMDIIAREKGK-FIVYFLTCACVEYYRRLPLNRMLSC--ALKNSSPGGQTEAEAQSTERKFIALHGKMNQNRRNRSLTQFVESENGVLFCTDVAARGIDIPDVDWVVQFDAPQEPDAYVHRVGRTARLGRDGKSTIFLAGSEESYVDFLKIRKCPMVKFDLFESSDTVEDLRKVVREATLGDRAILEASELAFLSYIRAYKEHRCRYLFKLDELDINSVADSFGLFRLPRFYEFK--KLRSKIKPRGEGVNIREIKFKDKQKETARQKKI 513
            L+PPL+EP++ A+  A  +K  TPVQA  IP L + KDV V A TGSGKTL+FLIPI + + + S  P KR  +  ++I PTREL+SQ++ VA      +P +V  + LVGG +  +    ++     L+I TPGRL   ++  + L    LE+LILDEADRLLDMGF   +  I++RLP+ RRTG++SATQT+ +  L++AGLRNPVRV V+ +      SV  +++     P+ L   +      ++ ++++D++ + K K  IVYF+TCACV+Y+       +L C  ALK  S                IALHGKM Q  R ++L  F    +G+L CTDVAARG+DIP VD +VQ+D PQ+P+ +VHRVGRTARLGR G + +FL   EE+Y++FL+IR+ P+ +       D V D+   +R A L DR ++E    AF+S+IRAYKEH C Y+F+  EL+I  +   +GL +LP   E K   L ++     E +N+ +IKFKDK +E  R+K +
Sbjct:   20 LKPPLSEPVLEALSQA-GFKFCTPVQAATIPLLCSFKDVAVDAATGSGKTLAFLIPIVEILRRSSSSPPKRHQVMGIIISPTRELSSQIYNVAQPFISTLP-NVKSMLLVGGVEVKADVKKIEDEGANLLIGTPGRLYDIMDRMDVLDFRNLEILILDEADRLLDMGFQKQINYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAETKSLSNSVSSEQLASSKTPSGLHLEYLECEADKKASQLVDLLVKTKSKKVIVYFMTCACVDYW-----GVVLPCLNALKGFS---------------LIALHGKMKQTAREKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFVHRVGRTARLGRQGSAIVFLLPKEEAYIEFLRIRRVPLQERKCI---DDVADVVPQIRSAALKDRDVMEKGLRAFVSFIRAYKEHHCSYIFRWKELEIGKLGTGYGLLQLPSMPEVKHHSLSTEGFTPVENINMDDIKFKDKSREKQRKKNL 516          
The following BLAST results are available for this feature:
BLAST of Ggra2609.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3235.780e-30973.20DEAD-box ATP-dependent RNA helicase 18 n=1 Tax=Gra... [more]
R7Q2Y61.580e-13552.97Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z1Y89.020e-13041.22ATP-dependent RNA helicase DDX55 n=1 Tax=Porphyrid... [more]
A0A1Y1II545.710e-12540.72DEAD-box ATP-dependent RNA helicase family protein... [more]
A0A059BI417.650e-12239.84Uncharacterized protein n=3 Tax=Myrtoideae TaxID=1... [more]
A0A7S3TNB11.000e-12141.22Hypothetical protein (Fragment) n=3 Tax=Emiliania ... [more]
DEAD-box ATP-dependent RNA helicase 18-like n=3 Tax=Ipomoea TaxID=4119 RepID=UPI000901C11E2.000e-12138.71DEAD-box ATP-dependent RNA helicase 18-like n=3 Ta... [more]
A0A507EGE23.330e-12141.17Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
DEAD-box ATP-dependent RNA helicase 18 isoform X1 n=3 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF936F74.490e-12139.14DEAD-box ATP-dependent RNA helicase 18 isoform X1 ... [more]
A0A1U8P5P05.050e-12142.72DEAD-box ATP-dependent RNA helicase 18-like n=22 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 27..229
e-value: 6.5E-45
score: 165.2
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 39..216
score: 23.341667
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 280..374
e-value: 5.3E-27
score: 105.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 298..374
e-value: 2.4E-23
score: 82.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 245..417
score: 17.729061
IPR025313Domain of unknown function DUF4217SMARTSM01178DUF4217_3coord: 415..478
e-value: 2.2E-13
score: 60.5
IPR025313Domain of unknown function DUF4217PFAMPF13959DUF4217coord: 421..475
e-value: 8.8E-14
score: 51.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 3..219
e-value: 6.8E-60
score: 204.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 238..486
e-value: 4.2E-46
score: 159.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..218
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 157..387
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 32..201
e-value: 1.0E-35
score: 123.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 514..561
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 528..542
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 19..597
NoneNo IPR availablePANTHERPTHR24031:SF2ATP-DEPENDENT RNA HELICASE DDX55coord: 19..597
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 236..383
e-value: 1.44813E-40
score: 141.876
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 162..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:944083..945882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2609.t1Ggra2609.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 944083..945882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2609.t1 ID=Ggra2609.t1|Name=Ggra2609.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=600bp
MATAGPWTALRPPLAEPLVNAIHDAFRYKSMTPVQATAIPPLLTCKDVCV
QAETGSGKTLSFLIPIAQEMLKKSPKPSKRIFSLVILPTRELASQVHAVA
CTLFHNIPGDVSPVPLVGGTDCSSAGPDVKYRDHRLIIATPGRLAAALES
NQLHCNTLEMLILDEADRLLDMGFSVTLTTILTRLPRQRRTGIYSATQTD
EIISLARAGLRNPVRVVVKVDSVEGKRVVPASLSSYFDMVPQAERLARVM
DIIAREKGKFIVYFLTCACVEYYRRLPLNRMLSCALKNSSPGGQTEAEAQ
STERKFIALHGKMNQNRRNRSLTQFVESENGVLFCTDVAARGIDIPDVDW
VVQFDAPQEPDAYVHRVGRTARLGRDGKSTIFLAGSEESYVDFLKIRKCP
MVKFDLFESSDTVEDLRKVVREATLGDRAILEASELAFLSYIRAYKEHRC
RYLFKLDELDINSVADSFGLFRLPRFYEFKKLRSKIKPRGEGVNIREIKF
KDKQKETARQKKISEARQRSNERIEKIARKGKKRKRKTKAHDTTQGKVKG
NGKGKTSQVEYHIRDDEEDFSFEAMQLRKLKRGKITQETFDQLTCQDKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR025313DUF4217
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS