Ggra2579.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2579.t1
Unique NameGgra2579.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length476
Homology
[Close]
BLAST of Ggra2579.t1 vs. uniprot
Match: R7QG50 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG50_CHOCR)

HSP 1 Score: 119 bits (299), Expect = 6.870e-26
Identity = 76/189 (40.21%), Postives = 104/189 (55.03%), Query Frame = 0 
Query:  232 LQKASELLVKALKSAEDKDQAGLAYAELSLTYGQVMLGFVIRRATGGGVLGNGAEAXXXXXXXXXXXXXXXQ-ITWTQLEIARVTFEKLVEGGNERLRARLAETHRTLGELLVALDQASQAGAEFGKASDMCEGRDRAECLHKLYLAMRREDKAVAGEALRKCIAALEGVGGAQDEDVLGELRDELRLF 419
            LQ+A+ L V  L S  D+ Q    +AEL   YG+ +LGFV +     GVLG  A+                + + WTQLE ARV FE+LV+GG +R  +RL + H  LG+LL+  D    A  E+  AS +  GR +AE L+K YLAMRR+    A EAL++ + A E      DE+ + ELR+EL  F
Sbjct:  209 LQEATRLFVLLLTSVPDEAQESAGFAELLTGYGKSLLGFVRKAGQRQGVLGAKAKGDAAPAEEDLEDEDDNEELAWTQLEAARVAFERLVKGGADRFNSRLGDVHGCLGDLLLEGDAWEAASREYDIASTLLSGRRKAEVLYKQYLAMRRDAAVKAVEALKESVRAFEDA--ESDEETIKELREELSGF 395
The following BLAST results are available for this feature:
BLAST of Ggra2579.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QG506.870e-2640.21Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 281..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 453..475
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:823210..824637 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2579.t1Ggra2579.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 823210..824637 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2579.t1 ID=Ggra2579.t1|Name=Ggra2579.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=476bp
MNGAPANIEAVPAANETHDAVAPSANNHSDQPKAAEKDQMRTSNGIEDCA
KDAKDAHDVPNTNSKHSEQPKKAEDDPVHASNGKREEANDVQEAHDAPNV
SNNPSDQPKKAEDVQIQNDAEDAHGLPGTNTNHSDEPKKAEHEPKQTSTG
GENTNDEKEANNANETSNAQGADADKQKESSSSQAAVVNKGKLSKQQKEV
SQMIADTVSDEVAKQYTQATEIIRSAPDEGALQKASELLVKALKSAEDKD
QAGLAYAELSLTYGQVMLGFVIRRATGGGVLGNGAEAAEEAEEDVVDEEE
EEQITWTQLEIARVTFEKLVEGGNERLRARLAETHRTLGELLVALDQASQ
AGAEFGKASDMCEGRDRAECLHKLYLAMRREDKAVAGEALRKCIAALEGV
GGAQDEDVLGELRDELRLFAGEGAERGGFGSSGGVAGGAAGGTAVKVVKV
VPKRKREGGARTGTEDVAAKRERLG*
back to top