Ggra2579.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2579.t1
Unique NameGgra2579.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length476
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:823210..824637 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2579Ggra2579Gracilaria gracilis GNS1m malegenetig00000005_pilon 823210..824637 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2579.t1.stop1Ggra2579.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000005_pilon 823210..823212 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2579.t1.CDS1Ggra2579.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000005_pilon 823210..824637 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2579.t1.exon1Ggra2579.t1.exon1Gracilaria gracilis GNS1m maleexontig00000005_pilon 823210..824637 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2579.t1.start1Ggra2579.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000005_pilon 824635..824637 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2579.t1Ggra2579.t1Gracilaria gracilis GNS1m malepolypeptidetig00000005_pilon 823210..824637 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2579.t1 ID=Ggra2579.t1|Name=Ggra2579.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=476bp
MNGAPANIEAVPAANETHDAVAPSANNHSDQPKAAEKDQMRTSNGIEDCA
KDAKDAHDVPNTNSKHSEQPKKAEDDPVHASNGKREEANDVQEAHDAPNV
SNNPSDQPKKAEDVQIQNDAEDAHGLPGTNTNHSDEPKKAEHEPKQTSTG
GENTNDEKEANNANETSNAQGADADKQKESSSSQAAVVNKGKLSKQQKEV
SQMIADTVSDEVAKQYTQATEIIRSAPDEGALQKASELLVKALKSAEDKD
QAGLAYAELSLTYGQVMLGFVIRRATGGGVLGNGAEAAEEAEEDVVDEEE
EEQITWTQLEIARVTFEKLVEGGNERLRARLAETHRTLGELLVALDQASQ
AGAEFGKASDMCEGRDRAECLHKLYLAMRREDKAVAGEALRKCIAALEGV
GGAQDEDVLGELRDELRLFAGEGAERGGFGSSGGVAGGAAGGTAVKVVKV
VPKRKREGGARTGTEDVAAKRERLG*
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spliced messenger RNA

>Ggra2579.t1 ID=Ggra2579.t1|Name=Ggra2579.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1428bp|location=Sequence derived from alignment at tig00000005_pilon:823210..824637- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAACGGTGCACCAGCAAACATTGAAGCCGTTCCGGCTGCGAACGAAAC
GCATGACGCTGTCGCGCCGAGTGCGAACAATCACAGTGACCAGCCCAAGG
CCGCCGAGAAGGACCAGATGCGCACTTCGAACGGCATTGAAGATTGTGCC
AAAGATGCAAAAGACGCCCATGACGTTCCCAACACGAACAGCAAGCACAG
CGAACAACCCAAGAAAGCCGAAGACGACCCCGTGCATGCTTCAAATGGCA
AAAGGGAGGAAGCTAACGATGTACAAGAAGCACATGACGCTCCGAATGTC
AGCAACAACCCCAGTGATCAACCCAAGAAAGCTGAAGACGTTCAGATTCA
AAATGATGCAGAAGACGCACATGGCCTGCCGGGCACAAACACCAACCACA
GTGATGAGCCCAAGAAAGCCGAGCACGAGCCAAAGCAGACGTCTACCGGC
GGCGAGAATACTAACGATGAAAAAGAGGCAAATAATGCAAATGAAACGTC
GAACGCCCAAGGCGCTGACGCAGACAAGCAGAAAGAAAGCAGCTCATCTC
AAGCGGCTGTAGTAAACAAGGGCAAGTTGTCCAAACAGCAGAAGGAAGTC
AGCCAGATGATCGCCGACACTGTGAGCGACGAAGTGGCCAAACAGTACAC
GCAGGCGACAGAGATTATACGCAGCGCGCCCGACGAGGGCGCGTTGCAGA
AGGCTTCGGAACTGTTGGTGAAGGCACTCAAGAGTGCAGAAGACAAGGAT
CAGGCCGGTTTGGCGTACGCAGAGTTGAGCCTGACATACGGGCAGGTGAT
GTTGGGCTTCGTCATTCGTCGTGCCACCGGTGGTGGCGTGCTCGGTAATG
GGGCGGAGGCTGCAGAGGAGGCAGAAGAAGACGTCGTAGATGAGGAGGAG
GAGGAGCAGATCACATGGACGCAGCTTGAGATTGCACGCGTGACGTTCGA
GAAACTGGTGGAGGGGGGCAATGAGCGGCTGAGAGCGCGGCTCGCAGAGA
CACACCGCACGTTAGGTGAACTGCTGGTGGCATTGGATCAGGCGAGCCAG
GCCGGGGCAGAATTCGGCAAGGCCAGTGACATGTGCGAGGGGCGTGATCG
TGCTGAGTGCCTGCACAAGCTGTACTTGGCCATGCGGCGAGAGGACAAAG
CTGTGGCCGGCGAGGCGCTACGCAAGTGCATTGCAGCACTGGAGGGCGTG
GGCGGGGCGCAGGACGAGGACGTGCTGGGCGAGCTGAGGGACGAGCTGCG
ACTGTTTGCGGGAGAGGGTGCGGAGAGAGGCGGATTTGGAAGCAGCGGTG
GGGTGGCAGGCGGGGCGGCAGGCGGGACGGCGGTGAAGGTGGTGAAGGTA
GTGCCGAAGCGGAAGCGCGAGGGAGGGGCTAGGACGGGGACGGAGGACGT
GGCGGCGAAGCGGGAGCGGCTGGGGTGA
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protein sequence of Ggra2579.t1

>Ggra2579.t1 ID=Ggra2579.t1|Name=Ggra2579.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=476bp
MNGAPANIEAVPAANETHDAVAPSANNHSDQPKAAEKDQMRTSNGIEDCA
KDAKDAHDVPNTNSKHSEQPKKAEDDPVHASNGKREEANDVQEAHDAPNV
SNNPSDQPKKAEDVQIQNDAEDAHGLPGTNTNHSDEPKKAEHEPKQTSTG
GENTNDEKEANNANETSNAQGADADKQKESSSSQAAVVNKGKLSKQQKEV
SQMIADTVSDEVAKQYTQATEIIRSAPDEGALQKASELLVKALKSAEDKD
QAGLAYAELSLTYGQVMLGFVIRRATGGGVLGNGAEAAEEAEEDVVDEEE
EEQITWTQLEIARVTFEKLVEGGNERLRARLAETHRTLGELLVALDQASQ
AGAEFGKASDMCEGRDRAECLHKLYLAMRREDKAVAGEALRKCIAALEGV
GGAQDEDVLGELRDELRLFAGEGAERGGFGSSGGVAGGAAGGTAVKVVKV
VPKRKREGGARTGTEDVAAKRERLG*
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mRNA from alignment at tig00000005_pilon:823210..824637-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2579.t1 ID=Ggra2579.t1|Name=Ggra2579.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1428bp|location=Sequence derived from alignment at tig00000005_pilon:823210..824637- (Gracilaria gracilis GNS1m male)
ATGAACGGTGCACCAGCAAACATTGAAGCCGTTCCGGCTGCGAACGAAAC
GCATGACGCTGTCGCGCCGAGTGCGAACAATCACAGTGACCAGCCCAAGG
CCGCCGAGAAGGACCAGATGCGCACTTCGAACGGCATTGAAGATTGTGCC
AAAGATGCAAAAGACGCCCATGACGTTCCCAACACGAACAGCAAGCACAG
CGAACAACCCAAGAAAGCCGAAGACGACCCCGTGCATGCTTCAAATGGCA
AAAGGGAGGAAGCTAACGATGTACAAGAAGCACATGACGCTCCGAATGTC
AGCAACAACCCCAGTGATCAACCCAAGAAAGCTGAAGACGTTCAGATTCA
AAATGATGCAGAAGACGCACATGGCCTGCCGGGCACAAACACCAACCACA
GTGATGAGCCCAAGAAAGCCGAGCACGAGCCAAAGCAGACGTCTACCGGC
GGCGAGAATACTAACGATGAAAAAGAGGCAAATAATGCAAATGAAACGTC
GAACGCCCAAGGCGCTGACGCAGACAAGCAGAAAGAAAGCAGCTCATCTC
AAGCGGCTGTAGTAAACAAGGGCAAGTTGTCCAAACAGCAGAAGGAAGTC
AGCCAGATGATCGCCGACACTGTGAGCGACGAAGTGGCCAAACAGTACAC
GCAGGCGACAGAGATTATACGCAGCGCGCCCGACGAGGGCGCGTTGCAGA
AGGCTTCGGAACTGTTGGTGAAGGCACTCAAGAGTGCAGAAGACAAGGAT
CAGGCCGGTTTGGCGTACGCAGAGTTGAGCCTGACATACGGGCAGGTGAT
GTTGGGCTTCGTCATTCGTCGTGCCACCGGTGGTGGCGTGCTCGGTAATG
GGGCGGAGGCTGCAGAGGAGGCAGAAGAAGACGTCGTAGATGAGGAGGAG
GAGGAGCAGATCACATGGACGCAGCTTGAGATTGCACGCGTGACGTTCGA
GAAACTGGTGGAGGGGGGCAATGAGCGGCTGAGAGCGCGGCTCGCAGAGA
CACACCGCACGTTAGGTGAACTGCTGGTGGCATTGGATCAGGCGAGCCAG
GCCGGGGCAGAATTCGGCAAGGCCAGTGACATGTGCGAGGGGCGTGATCG
TGCTGAGTGCCTGCACAAGCTGTACTTGGCCATGCGGCGAGAGGACAAAG
CTGTGGCCGGCGAGGCGCTACGCAAGTGCATTGCAGCACTGGAGGGCGTG
GGCGGGGCGCAGGACGAGGACGTGCTGGGCGAGCTGAGGGACGAGCTGCG
ACTGTTTGCGGGAGAGGGTGCGGAGAGAGGCGGATTTGGAAGCAGCGGTG
GGGTGGCAGGCGGGGCGGCAGGCGGGACGGCGGTGAAGGTGGTGAAGGTA
GTGCCGAAGCGGAAGCGCGAGGGAGGGGCTAGGACGGGGACGGAGGACGT
GGCGGCGAAGCGGGAGCGGCTGGGGTGA
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Coding sequence (CDS) from alignment at tig00000005_pilon:823210..824637-

>Ggra2579.t1 ID=Ggra2579.t1|Name=Ggra2579.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1428bp|location=Sequence derived from alignment at tig00000005_pilon:823210..824637- (Gracilaria gracilis GNS1m male)
ATGAACGGTGCACCAGCAAACATTGAAGCCGTTCCGGCTGCGAACGAAAC
GCATGACGCTGTCGCGCCGAGTGCGAACAATCACAGTGACCAGCCCAAGG
CCGCCGAGAAGGACCAGATGCGCACTTCGAACGGCATTGAAGATTGTGCC
AAAGATGCAAAAGACGCCCATGACGTTCCCAACACGAACAGCAAGCACAG
CGAACAACCCAAGAAAGCCGAAGACGACCCCGTGCATGCTTCAAATGGCA
AAAGGGAGGAAGCTAACGATGTACAAGAAGCACATGACGCTCCGAATGTC
AGCAACAACCCCAGTGATCAACCCAAGAAAGCTGAAGACGTTCAGATTCA
AAATGATGCAGAAGACGCACATGGCCTGCCGGGCACAAACACCAACCACA
GTGATGAGCCCAAGAAAGCCGAGCACGAGCCAAAGCAGACGTCTACCGGC
GGCGAGAATACTAACGATGAAAAAGAGGCAAATAATGCAAATGAAACGTC
GAACGCCCAAGGCGCTGACGCAGACAAGCAGAAAGAAAGCAGCTCATCTC
AAGCGGCTGTAGTAAACAAGGGCAAGTTGTCCAAACAGCAGAAGGAAGTC
AGCCAGATGATCGCCGACACTGTGAGCGACGAAGTGGCCAAACAGTACAC
GCAGGCGACAGAGATTATACGCAGCGCGCCCGACGAGGGCGCGTTGCAGA
AGGCTTCGGAACTGTTGGTGAAGGCACTCAAGAGTGCAGAAGACAAGGAT
CAGGCCGGTTTGGCGTACGCAGAGTTGAGCCTGACATACGGGCAGGTGAT
GTTGGGCTTCGTCATTCGTCGTGCCACCGGTGGTGGCGTGCTCGGTAATG
GGGCGGAGGCTGCAGAGGAGGCAGAAGAAGACGTCGTAGATGAGGAGGAG
GAGGAGCAGATCACATGGACGCAGCTTGAGATTGCACGCGTGACGTTCGA
GAAACTGGTGGAGGGGGGCAATGAGCGGCTGAGAGCGCGGCTCGCAGAGA
CACACCGCACGTTAGGTGAACTGCTGGTGGCATTGGATCAGGCGAGCCAG
GCCGGGGCAGAATTCGGCAAGGCCAGTGACATGTGCGAGGGGCGTGATCG
TGCTGAGTGCCTGCACAAGCTGTACTTGGCCATGCGGCGAGAGGACAAAG
CTGTGGCCGGCGAGGCGCTACGCAAGTGCATTGCAGCACTGGAGGGCGTG
GGCGGGGCGCAGGACGAGGACGTGCTGGGCGAGCTGAGGGACGAGCTGCG
ACTGTTTGCGGGAGAGGGTGCGGAGAGAGGCGGATTTGGAAGCAGCGGTG
GGGTGGCAGGCGGGGCGGCAGGCGGGACGGCGGTGAAGGTGGTGAAGGTA
GTGCCGAAGCGGAAGCGCGAGGGAGGGGCTAGGACGGGGACGGAGGACGT
GGCGGCGAAGCGGGAGCGGCTGGGGTGA
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