Ggra2573.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra2573.t1
Unique Name	Ggra2573.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	394

Homology

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BLAST of Ggra2573.t1 vs. uniprot
Match: A0A2V3IKR1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKR1_9FLOR)

HSP 1 Score: 298 bits (763), Expect = 3.030e-94
Identity = 189/437 (43.25%), Postives = 239/437 (54.69%), Query Frame = 0

Query:   19 SFACVFAKPDALHALQHVRRAQVRQSSPVLAPLQPRHVANIVSKLHSIVTELVTEFDDRMSLEPTAELDDQVDVSSSEELPEISLEPENDHAPASSAPTASIAPSL---LPLSTTVTSSRGRRSYSPIIPPSDTVVA------------SAEMDDFEEHISLEETIAEHHH-----EQPSVAPTNFFPS------------------------------------------TEKPIRTLTFGFKGYTDSIVLLLPDSGETAQDMESFVHQLREEGFTRTKFIAIQPKDIWISNKGSKQPAWFDASDPTLGAPRQSQILRATENVMKVARGRRPTIIGFGQGGAIALTAYMRYGVDGVVSSCGGLPLVGTYPKEMTDDSKDSMALVIGGDHVAGGVERMLDARREVVFLRTNQPKENGRFKENVIGYVVGVLNRAIAT 393
            +FACVFA   A             +   V        + +I+  L S+  E + E+     L+P+ E DD V      E PE + E + +    + +P AS+APS    +P S      +   SY  + P ++                SA +D  EE      +  E +      + P V+P    P                                            E P+RT  +G KGYTDSIVL+L DS ETA+DMESFV QLRE GF R+KFIA+Q  ++WI  +  K+ AW+D S    GA R++Q+LRATE VMK+ARGRRPTIIGFGQGG +ALTAYMRYGVDGVVSSCGGL L+ +YP+EMT DS+ SMALV+GGDHV  G ERM    R+VVFLRTNQPKENGRFK+ VIGYV+GVLNRAIAT
Sbjct:   12 TFACVFATLKAQDVSVQSEGLSALEPKTVTVRFNSTDLESIIKTLDSLFEEALIEYGKDWPLKPSVESDDAV------ETPESTPESDIESPMVTFSPIASVAPSQTTSMPSSRKSGRKKSLGSYYSVAPSAEVEAVEGVEETAEEESGSARIDALEESEENASSSPEPYPVAKIPQSPDVSPKPSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVPLRTSVYGHKGYTDSIVLMLADSEETAEDMESFVDQLREAGFVRSKFIAVQADELWIHGEDKKKIAWYDGSKDAHGAIREAQMLRATERVMKLARGRRPTIIGFGQGGTVALTAYMRYGVDGVVSSCGGLGLLSSYPREMTKDSEGSMALVVGGDHVRSGAERMQSLGRDVVFLRTNQPKENGRFKDEVIGYVIGVLNRAIAT 442

The following BLAST results are available for this feature:

BLAST of Ggra2573.t1 vs. uniprot

BLAST of Ggra2573.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IKR1	3.030e-94	43.25	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820	alpha/beta hydrolase	coord: 187..346 e-value: 1.6E-13 score: 52.7
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 205..333
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..121
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..393
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..8
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 21..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 9..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..25
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..22 score: 5.0
None	No IPR available	TMHMM	TMhelix		coord: 5..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000005_pilon	contig	tig00000005_pilon:806430..807818 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra2573.t1	Ggra2573.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000005_pilon 806430..807818 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra2573.t1 ID=Ggra2573.t1|Name=Ggra2573.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=394bp
MARVAALRCAALALVLLLSFACVFAKPDALHALQHVRRAQVRQSSPVLAP
LQPRHVANIVSKLHSIVTELVTEFDDRMSLEPTAELDDQVDVSSSEELPE
ISLEPENDHAPASSAPTASIAPSLLPLSTTVTSSRGRRSYSPIIPPSDTV
VASAEMDDFEEHISLEETIAEHHHEQPSVAPTNFFPSTEKPIRTLTFGFK
GYTDSIVLLLPDSGETAQDMESFVHQLREEGFTRTKFIAIQPKDIWISNK
GSKQPAWFDASDPTLGAPRQSQILRATENVMKVARGRRPTIIGFGQGGAI
ALTAYMRYGVDGVVSSCGGLPLVGTYPKEMTDDSKDSMALVIGGDHVAGG
VERMLDARREVVFLRTNQPKENGRFKENVIGYVVGVLNRAIAT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029058	AB_hydrolase