Ggra2562.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2562.t1
Unique NameGgra2562.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length416
Homology
BLAST of Ggra2562.t1 vs. uniprot
Match: A0A2V3IBS7 (Uncharacterized protein n=6 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBS7_9FLOR)

HSP 1 Score: 349 bits (896), Expect = 3.070e-114
Identity = 177/395 (44.81%), Postives = 253/395 (64.05%), Query Frame = 0
Query:   24 KKGRRQSANTCVVNQNHQLRGAKSDKGEPQYVLLRGTIPDVVRWARQRMD------EESADIASNSDEKEGRQAATLNPRTFAQTITLNHRVEILLNGFASWKGETRLWENVCSFAAKLPEGGKASSIFDAMSRYPASILVFYGLKALFGRYIVVAGRKIPRLALRQNAYSFFSPYGNEETFAKKWFDSSTLSRMQETVTHMCAISEYIMRCVYMTKSASTDECDSETKLFSLLEKRIREGQDHLNRRVLRFEPWDGLNELAVQHIAPCLESSMNIAHESVIEGARLSVRIYCQKEGRGKERERIKLWMLKRPLPEIMDCLIRKLEVAVCDVLGSRVDIDDFRLQIVRHLRRIVAIYEEVGDTWFRNDEDYHFPRDPPKRVKFLTLSTPYTFCFS 412
            K GR++  +   V +N     A   + +P+ ++L  +IPDVVRW R+RMD      EE+  +  N + K     +  N R+FAQ I   + V IL+NG   WKGET +WENVC+ +AKLP  G+  +IFDAMSRYP+S +V+ GLK L+GR +VV  R++ R +L +NA + +SP  ++ T AKKWF+ +TL+RMQE V HMCAISEYI+RC Y  K AS    D  +   S +E RI++ QD  NR VLRF+ WD + EL+   +A CLE S+ +AH +VI+G + + R Y +KEG G+ R +I+LWMLKRPLP++MD LI +LE  + D+LG  +D D FR+  +RHLR + +I+ EVG  W  ++ D+  P + PK  + L  + PY +  S
Sbjct:   33 KSGRKRIISNVKVREN-----AARKELQPRKIVLSESIPDVVRWVRERMDAEVEETEEAHGLLRNQNTK-----SFYNARSFAQKIVKQYDVRILMNGSKYWKGETSMWENVCALSAKLPGEGRGRNIFDAMSRYPSSRIVYSGLKLLYGRNMVVGDRRVHRFSLPENAIALYSPGRSDGTIAKKWFEDNTLARMQELVIHMCAISEYILRCAYQAKEASACAGDEASCFLSFVESRIKDDQDCKNRNVLRFDSWDPMAELSSDCLASCLEKSLGVAHGAVIDGTKKACRKYGRKEGNGRSRVKIQLWMLKRPLPDVMDALINRLETVLRDILGDTIDFDMFRVYAMRHLRSVDSIFTEVGSVWCSHELDFRPPLERPKNTEALVSTRPYIYGLS 417          
BLAST of Ggra2562.t1 vs. uniprot
Match: A0A2V3IJ48 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ48_9FLOR)

HSP 1 Score: 229 bits (585), Expect = 2.710e-69
Identity = 114/233 (48.93%), Postives = 160/233 (68.67%), Query Frame = 0
Query:   55 VLLRGTIPDVVRWARQRMDEESADIASNSDEKEGRQAATLNPRTFAQTITLNHRVEILLNGFASWKGETRLWENVCSFAAKLPEGGKASSIFDAMSRYPASILVFYGLKALFGRYIVVAGRKIPRLALRQNAYSFFSPYGNEETFAKKWFDSSTLSRMQETVTHMCAISEYIMRCVYMTKSASTDECDSETKLFSLLEKRIREGQDHLNRRVLRFEPWDGLNELAVQHIAPCL 287
            V+++GTIPDV  WAR+++D E   +       EG+++ +   R+ A+ +     V I +N    WK E+RLWEN+ +FA KLP  GK ++I DAMSRYP+SILV+ G+K  FGR +V+AGRK PR +L +NA + FSP G+EE+ +KKWF+S+TLSRMQ+ V HMCA+SEY++RC YM+K         E +  +LLE R+R  +D  NR +LRF+PWD L+EL+ Q I PCL
Sbjct:   63 VVIQGTIPDVFCWAREKIDAEPESL-------EGKESLS-GARSLARHVLGKQNVVIAMNEIDYWKAESRLWENIYAFAVKLPGDGKENNILDAMSRYPSSILVYRGVKYFFGRKMVIAGRKTPRFSLTKNALAIFSPSGSEESLSKKWFESNTLSRMQKMVVHMCAVSEYVLRCAYMSKRYRKFGEHQEYEFHALLECRLRTERDFKNREMLRFDPWDSLSELSPQDIFPCL 287          
BLAST of Ggra2562.t1 vs. uniprot
Match: A0A2V3IEW8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEW8_9FLOR)

HSP 1 Score: 219 bits (557), Expect = 1.280e-65
Identity = 105/232 (45.26%), Postives = 149/232 (64.22%), Query Frame = 0
Query:  181 ALRQNAYSFFSPYGNEETFAKKWFDSSTLSRMQETVTHMCAISEYIMRCVYMTKSASTDECDSETKLFSLLEKRIREGQDHLNRRVLRFEPWDGLNELAVQHIAPCLESSMNIAHESVIEGARLSVRIYCQKEGRGKERERIKLWMLKRPLPEIMDCLIRKLEVAVCDVLGSRVDIDDFRLQIVRHLRRIVAIYEEVGDTWFRNDEDYHFPRDPPKRVKFLTLSTPYTFCFS 412
            +L +   S   P  ++ T AKKWF+ +TL+RMQE V HMCAISEYI+RC Y  K AS    D  +   S +E RI+  QD  NR+VLRF+ WD + EL+   +A CLE S+ +AH +VI+G + + R Y +KEG G+ R +I+LWMLKRPLP++MD LI +LE  + D+LG  +D D FR+  +RHLR + +I+ EVG  W  ++ D+  P + PK  + L  + PY +  S
Sbjct:   15 SLARECNSSLQPGRSDGTIAKKWFEDNTLARMQELVIHMCAISEYILRCAYQAKEASACAGDEASCFLSFVESRIKVDQDCKNRKVLRFDSWDPMAELSSDCLASCLEKSLGVAHGAVIDGTKKACRKYGRKEGNGRSRVKIQLWMLKRPLPDVMDALINRLETVLRDILGDTIDFDMFRVYAMRHLRSVDSIFTEVGSVWCSHELDFRPPLERPKNTEALVSTRPYIYGLS 246          
The following BLAST results are available for this feature:
BLAST of Ggra2562.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IBS73.070e-11444.81Uncharacterized protein n=6 Tax=Gracilariopsis cho... [more]
A0A2V3IJ482.710e-6948.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEW81.280e-6545.26Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:775523..776770 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2562.t1Ggra2562.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 775523..776770 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2562.t1 ID=Ggra2562.t1|Name=Ggra2562.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=416bp
MKPPKKPRKEPANLGASRSSLRIKKGRRQSANTCVVNQNHQLRGAKSDKG
EPQYVLLRGTIPDVVRWARQRMDEESADIASNSDEKEGRQAATLNPRTFA
QTITLNHRVEILLNGFASWKGETRLWENVCSFAAKLPEGGKASSIFDAMS
RYPASILVFYGLKALFGRYIVVAGRKIPRLALRQNAYSFFSPYGNEETFA
KKWFDSSTLSRMQETVTHMCAISEYIMRCVYMTKSASTDECDSETKLFSL
LEKRIREGQDHLNRRVLRFEPWDGLNELAVQHIAPCLESSMNIAHESVIE
GARLSVRIYCQKEGRGKERERIKLWMLKRPLPEIMDCLIRKLEVAVCDVL
GSRVDIDDFRLQIVRHLRRIVAIYEEVGDTWFRNDEDYHFPRDPPKRVKF
LTLSTPYTFCFSRSV*
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