Ggra2561.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2561.t1
Unique NameGgra2561.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length235
Homology
BLAST of Ggra2561.t1 vs. uniprot
Match: A0A2V3IKQ0 (Magnesium transporter n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKQ0_9FLOR)

HSP 1 Score: 404 bits (1038), Expect = 7.080e-140
Identity = 206/230 (89.57%), Postives = 220/230 (95.65%), Query Frame = 0
Query:    2 EAPAAVPLAAVELSSKKAPKGTFIQKADAAQELGLMVRDLRVVDPSFRSQAPAILPRQSAIIIHLAHIRIIVLSDRALAFDPTNPAVEYFLPKLQRRLDAPTHPMPFEFRAVEAVLVEIVSTFNATIGTLIPSLDLVLDTLSTTQDFGGGTVQNCMDRLLPLENALNEFSVKVSQTRAALNEVLVSDEDMSLMYLSSFKETGVRRRVDQHDEVEMMLENYMKQIDTVYSE 231
            EAPA+VPLAAVEL SKK PKGTFIQKADAAQE+GLMVRDLR VDPSFRSQA AILPRQS IIIHLAH+R+IVL+DR LAFDPTNPAVEYFLPKLQRRLDAP+HPMPFEFRA+EAVLVE+VSTFNA IGTLIPSLDLVLDTLSTTQDFGG TVQNCMDRLLPLENALNEF  KV+QTRAALNEVLVSDEDMSLMY+S+FKETG+RRR+DQHDEVEMMLENYMKQIDTV+SE
Sbjct:   17 EAPASVPLAAVELCSKKPPKGTFIQKADAAQEIGLMVRDLRAVDPSFRSQAAAILPRQSGIIIHLAHVRVIVLADRVLAFDPTNPAVEYFLPKLQRRLDAPSHPMPFEFRAIEAVLVEVVSTFNARIGTLIPSLDLVLDTLSTTQDFGGDTVQNCMDRLLPLENALNEFGAKVAQTRAALNEVLVSDEDMSLMYISTFKETGIRRRIDQHDEVEMMLENYMKQIDTVHSE 246          
BLAST of Ggra2561.t1 vs. uniprot
Match: A0A7S2ZZK0 (Magnesium transporter n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZZK0_9RHOD)

HSP 1 Score: 231 bits (588), Expect = 3.080e-71
Identity = 121/232 (52.16%), Postives = 165/232 (71.12%), Query Frame = 0
Query:    2 EAPAAVPLAAVELSSKKAPKGTFIQKADAAQELGLMVRDLRVVDPSFRSQAPAILPRQSAIIIHLAHIRIIVLSDRALAFDPTNPAVEYFLPKLQRRLDAPTHPMPFEFRAVEAVLVEIVSTFNATIGTLIPSLDLVLDTLS--TTQDFGGGTVQNCMDRLLPLENALNEFSVKVSQTRAALNEVLVSDEDMSLMYLSSFKETGVRRRVDQHDEVEMMLENYMKQIDTVYSE 231
            + PA+VP+ A+E+ +    +   +QK+D A EL L  RDLRVVDPSFRS+    L R SAI++HL HIR +V ++R L FDP +P V+ FLP+L+ RL   THP+P+E RA+EA+L+ +  T N ++ TL PS++ VLDTLS  TT DFG   V   +DRLLPLEN++NEF  +V Q R+A+ EVL +DEDMS MYL+    TG RRR DQH++VEMM E Y+KQ+D++ +E
Sbjct:   47 QTPASVPIIALEIKTDGTIRERHLQKSDVAAELHLNYRDLRVVDPSFRSETAMFLARSSAIVVHLEHIRALVQANRILLFDPNHPRVQAFLPQLRDRLRQETHPLPYELRALEAILINVCGTLNRSLLTLSPSVESVLDTLSSSTTADFGSVQVAQSLDRLLPLENSMNEFGSQVEQIRSAMIEVLENDEDMSEMYLTDKMVTGHRRRADQHEDVEMMFETYLKQVDSILNE 278          
BLAST of Ggra2561.t1 vs. uniprot
Match: A0A1X6P9F5 (Magnesium transporter n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9F5_PORUM)

HSP 1 Score: 223 bits (567), Expect = 5.250e-68
Identity = 117/227 (51.54%), Postives = 153/227 (67.40%), Query Frame = 0
Query:    2 EAPAAVPLAAVELSSKKAPKGTFIQKADAAQELGLMVRDLRVVDPSFRSQAPAILPRQSAIIIHLAHIRIIVLSDRALAFDPTNPAVEYFLPKLQRRLDAPTHPMPFEFRAVEAVLVEIVSTFNATIGTLIPSLDLVLDTLSTTQDFGGGTVQNCMDRLLPLENALNEFSVKVSQTRAALNEVLVSDEDMSLMYLSSFKETGVRRRVDQHDEVEMMLENYMKQIDTV 228
            E PA +PLAA+E+    A     +QKAD A EL L +RDLRVVDP+FR+++P +L R +A++IHL H+RI+V + R L FDP +PAV    P+L+ RL    HP+PFE RA+EAVLV++     A +G L P +   LD +S   +FGG  V   +D+LLPLE  LNE +  V   R ALNEVL+SDEDMS MYLS    TG  R VD+HDE+EMM+E Y+KQ+D V
Sbjct:   55 EPPATIPLAALEILPNGAVSARHVQKADVAAELSLNLRDLRVVDPTFRNESPVVLARPTAMVIHLLHVRILVTASRVLLFDPHHPAVAALTPRLRARLIDAAHPLPFEMRALEAVLVDVCCGIRAEVGRLKPKVQAALDVMSKDGEFGGRGVTEGLDQLLPLEMGLNELTGSVGMVRTALNEVLMSDEDMSDMYLSWKSATGEERGVDEHDEIEMMVEGYLKQVDAV 281          
BLAST of Ggra2561.t1 vs. uniprot
Match: A0A5J4YRP2 (Magnesium transporter n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRP2_PORPP)

HSP 1 Score: 217 bits (552), Expect = 1.740e-65
Identity = 117/225 (52.00%), Postives = 161/225 (71.56%), Query Frame = 0
Query:   11 AVELSSKKAPKGTF--IQKADAAQELGLMVRDLRVVDPSFRSQAPAILPRQSAIIIHLAHIRIIVLSDRALAFDPTNPAVEYFLPKLQRRLDAPTHPMPFEFRAVEAVLVEIVSTFNATIGTLIPSLDLVLDTLSTT--QDFGGGTVQNCMDRLLPLENALNEFSVKVSQTRAALNEVLVSDEDMSLMYLSSFKETGVRRRVDQHDEVEMMLENYMKQIDTVYSE 231
            AV++ +    +GT   + KAD A   GL +RD+R VDPSFR ++PA+L R  AII++L HIR I+ +DR L F+P +P+V+ F+P+LQ RL A +  +PFE RA+E VL+ + ++      TL P++D VLD LS+T    FG  +VQ  +DRLLPLENALNEF  KV+  R A+++VL SDEDMS MYL+S  ++G RRR D+H+EVEMMLENYMK ID+V++E
Sbjct:   83 AVKVRTNAGERGTLRNLTKADLAATTGLNLRDIRNVDPSFRQESPAVLVRSKAIIVNLEHIRAILQADRLLLFEPMHPSVQAFIPELQARLQAESSLLPFELRALEVVLINVCASLQRHASTLSPAVDSVLDNLSSTGVSSFGSDSVQTSLDRLLPLENALNEFLNKVTMIRTAIDDVLSSDEDMSAMYLTSVIQSGHRRRRDEHEEVEMMLENYMKVIDSVHNE 307          
BLAST of Ggra2561.t1 vs. uniprot
Match: A0A7S1ERJ7 (Magnesium transporter (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERJ7_9RHOD)

HSP 1 Score: 209 bits (532), Expect = 2.420e-63
Identity = 108/206 (52.43%), Postives = 148/206 (71.84%), Query Frame = 0
Query:   25 IQKADAAQELGLMVRDLRVVDPSFRSQAPAILPRQSAIIIHLAHIRIIVLSDRALAFDPTNPAVEYFLPKLQRRLDAPTHPMPFEFRAVEAVLVEIVSTFNATIGTLIPSLDLVLDTLST--TQDFGGGTVQNCMDRLLPLENALNEFSVKVSQTRAALNEVLVSDEDMSLMYLSSFKETGVRRRVDQHDEVEMMLENYMKQIDTV 228
            + K + A   GL +RD+R VD SFR +APAIL R +A+I+ L H+R ++ +DR L FDP +PAV  F+P+L  RL + + P+PFEFRA+EAVL+ + ++ +  + TL P+++ VLDTL++  + DFG  +VQ  +DRLLPLEN+LNEF  KV+Q        L SDEDMS MYL+S  ETG RRR DQH+E+EMM ENY+KQID+V
Sbjct:  123 VTKTELAANTGLNLRDIRAVDASFRQEAPAILVRSNAVILKLEHVRALIQADRMLLFDPVHPAVRAFVPELAARLGSGSSPLPFEFRALEAVLINVTASIHRHMSTLAPAVESVLDTLTSAGSADFGSESVQTSLDRLLPLENSLNEFLSKVTQXXXXXXXXLSSDEDMSEMYLTSVLETGHRRRQDQHEEIEMMFENYLKQIDSV 328          
BLAST of Ggra2561.t1 vs. uniprot
Match: M2Y017 (Magnesium transporter n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y017_GALSU)

HSP 1 Score: 215 bits (547), Expect = 1.400e-62
Identity = 114/249 (45.78%), Postives = 167/249 (67.07%), Query Frame = 0
Query:    2 EAPAAVPLAAVELSSKKAPKGTFIQKADAAQELGLMVRDLRVVDPSFRSQAPAILPRQSAII-------------------IHLAHIRIIVLSDRALAFDPTNPAVEYFLPKLQRRLDAPTHPMPFEFRAVEAVLVEIVSTFNATIGTLIPSLDLVLDTLSTTQDFGGGTVQNCMDRLLPLENALNEFSVKVSQTRAALNEVLVSDEDMSLMYLSSFKETGVRRRVDQHDEVEMMLENYMKQIDTVYSE 231
            EA AAVPL  +E+          +QK + A  L L  RDLRVVDPSFR+++P  L R++ ++                   +H  HIR ++ +   L FDP +P+V+ F+P L+ R+   +HP+PFEFR++EA+L+++ ++ +  + TL+P+++ VLDTLS+  D G  TV++C+DRLLPL+N+LNEF VK+ +   ALN+VL SDEDMS MYL++  ETG RRRVDQH+EVEMM E Y+KQID++ +E
Sbjct:    5 EAIAAVPLVCIEVDIHGNMTSKQVQKTELASFLKLNFRDLRVVDPSFRNESPVFLARKNVVVGIPRFFCPVLLIGFGYLKVVHFEHIRAVIQATSILLFDPPHPSVQNFIPSLRTRIRDRSHPLPFEFRSLEAILIDVCTSLSRQLRTLVPAVENVLDTLSSN-DTGADTVRSCLDRLLPLQNSLNEFEVKIREAHTALNDVLRSDEDMSEMYLTTKLETGHRRRVDQHEEVEMMFETYLKQIDSMLNE 252          
BLAST of Ggra2561.t1 vs. uniprot
Match: M1VGU3 (Magnesium transporter n=2 Tax=cellular organisms TaxID=131567 RepID=M1VGU3_CYAM1)

HSP 1 Score: 189 bits (480), Expect = 5.080e-54
Identity = 111/234 (47.44%), Postives = 147/234 (62.82%), Query Frame = 0
Query:   25 IQKADAAQELGLMVRDLRVVDPSFRSQAPAILPRQSAIIIHLAHIRIIVLSDRALAFDPTNPAVEYFLPKLQRRL--DAPTHPMPFEFRAVEAVLVEIVSTFNATIGTLIPSLDLVLDTLSTTQDFGGGTVQNC-------------------------MDRLLPLENALNEFSVKVSQTRAALNEVLVSDEDMSLMYLSSFKETGVRRRVDQHDEVEMMLENYMKQIDTVYSE 231
            + KA  A  L L +RDLRVVDP+FR++AP +L RQSAI+IHL HIR +V +DR   FDP  PAVE FLP+L  RL   +P   +PFE RA+E++LV++ ++    +  L+P ++ +L  LS+  D  G T                             +DRLL  +N LNE   + +Q R ALNEVL+SDEDMS MYLS+  E+G RRRVDQH+EVEMM ENY+KQID++ SE
Sbjct:  148 LAKALLAARLRLPLRDLRVVDPAFRNEAPVVLARQSAIVIHLEHIRAVVEADRVTLFDPEQPAVEAFLPQLHARLALSSPRPALPFELRALESILVDVCNSLMREMRYLVPGIESLLRALSS-DDVAGATASAAAAADASTTPNSTAGDASSIPPDVIMLDRLLGAKNKLNELQNRATQLRNALNEVLLSDEDMSEMYLSTKAESGHRRRVDQHEEVEMMFENYLKQIDSLVSE 380          
BLAST of Ggra2561.t1 vs. uniprot
Match: A0A7J7IG99 (Magnesium transporter n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IG99_9RHOD)

HSP 1 Score: 184 bits (466), Expect = 6.020e-52
Identity = 109/233 (46.78%), Postives = 144/233 (61.80%), Query Frame = 0
Query:   25 IQKADAAQELGLMVRDLRVVDPSFRSQAPAILPRQSAIIIHLAHIRIIVLSDRALAFDPTNPAVEYFLPKLQRRLDAPT-HP-MPFEFRAVEAVLVEIVSTFNATIGTLIPSLDLVLDTLSTTQDFGGGTVQNC------------------------MDRLLPLENALNEFSVKVSQTRAALNEVLVSDEDMSLMYLSSFKETGVRRRVDQHDEVEMMLENYMKQIDTVYSE 231
            + KA  A  L L +RDLRVVDP+FR++AP IL RQ AI+IHL HIR +V +DR   FDP  PAVE FLP+L  RL      P +PFE RA+E++LV++ +     +  L+P+++ +L  LS+    G  T                            +DRLL  +N LNE   + +Q R+ALNEVL+SDEDMS MYLS   E+G RRRVDQH+EVEMM ENY+KQ+D++ SE
Sbjct:  149 LSKAALAARLRLPLRDLRVVDPAFRNEAPVILARQGAIVIHLEHIRAVVEADRVTLFDPEQPAVEAFLPQLHARLATSNMRPVLPFELRALESILVDVCNGLMREMRYLVPAIESMLHALSSDTTAGTATXXXXXXXXXXXXNTGAEASHSIPPDAIMLDRLLGAKNKLNELQNRATQLRSALNEVLLSDEDMSEMYLSIKAESGHRRRVDQHEEVEMMFENYLKQVDSMVSE 381          
BLAST of Ggra2561.t1 vs. uniprot
Match: A0A168LTR0 (Magnesium transporter n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168LTR0_ABSGL)

HSP 1 Score: 128 bits (322), Expect = 9.810e-32
Identity = 76/212 (35.85%), Postives = 125/212 (58.96%), Query Frame = 0
Query:   25 IQKADAAQELGLMVRDLRVVDPSFRSQAPAILPRQSAIIIHLAHIRIIVLSDRALAFDPTNPAVEY----FLPKLQRRLDAPTHPMPFEFRAVEAVLVEIVSTFNATIGTLIPSLDLVLDTLSTTQDFGGGTVQNCMDRLLPLENALNEFSVKVSQTRAALNEVLVSDEDMSLMYLSSFKETGVRRRVDQHDEVEMMLENYMKQIDTVYSET 232
            I+K++  Q+  LM RDLR +D    +Q P+IL R  AI+I++AH+R ++ SD  + FD       Y    F+  LQ RL +    +PFEF+A+EA+L+ + S+  + +  L   ++ +L  L    D      Q+ +  LL L   L++F   VS  R AL+E+L  D+D++ MYL++ K++G  R+   H+EVE++LE Y+KQ + + +ET
Sbjct:   64 IRKSEFCQQHSLMPRDLRAIDTRSVNQKPSILVRSEAILINMAHLRALLKSDMVVLFDTFGSTDSYNQSVFVQDLQERLASSNDQLPFEFKALEAILISVTSSMQSELEALEGPVNRLLSDLEGLVDIEESVNQDRLKDLLQLSKKLSKFEHDVSSVRDALDELLEYDDDLAAMYLTA-KKSGHPRKPSDHEEVELLLEAYLKQTEEIANET 274          
BLAST of Ggra2561.t1 vs. uniprot
Match: A0A1X2IK90 (Magnesium transporter n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IK90_9FUNG)

HSP 1 Score: 127 bits (318), Expect = 3.740e-31
Identity = 75/212 (35.38%), Postives = 124/212 (58.49%), Query Frame = 0
Query:   25 IQKADAAQELGLMVRDLRVVDPSFRSQAPAILPRQSAIIIHLAHIRIIVLSDRALAFDPTNPAVEY----FLPKLQRRLDAPTHPMPFEFRAVEAVLVEIVSTFNATIGTLIPSLDLVLDTLSTTQDFGGGTVQNCMDRLLPLENALNEFSVKVSQTRAALNEVLVSDEDMSLMYLSSFKETGVRRRVDQHDEVEMMLENYMKQIDTVYSET 232
            I+K++  Q+  L+ RDLR +D    +Q P+IL R  AI+I++AH+R ++ SD  + FD       Y    F+  LQ RL +    +PFEF+A+EA+L+ + S+  + +  L   ++ +LD L    D      Q  +  LL L   L++F   VS  R A++E+L  D+D++ MYL++ K++G  R    H+EVE++LE Y+KQ + + +ET
Sbjct:   64 IRKSEFCQQHSLLPRDLRTIDTRSVNQKPSILVRSEAILINMAHMRALLKSDLVVLFDTFGSTNSYNQSVFVYDLQERLRSKNDQLPFEFKALEAILISVTSSMQSELEALEGPVNRLLDDLEGLVDIEESVNQERLKDLLHLSKKLSKFEHDVSSVRDAIDELLEFDDDLAAMYLTA-KKSGFSRDASDHEEVELLLEAYLKQTEEIANET 274          
The following BLAST results are available for this feature:
BLAST of Ggra2561.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IKQ07.080e-14089.57Magnesium transporter n=1 Tax=Gracilariopsis chord... [more]
A0A7S2ZZK03.080e-7152.16Magnesium transporter n=2 Tax=Rhodosorus marinus T... [more]
A0A1X6P9F55.250e-6851.54Magnesium transporter n=1 Tax=Porphyra umbilicalis... [more]
A0A5J4YRP21.740e-6552.00Magnesium transporter n=1 Tax=Porphyridium purpure... [more]
A0A7S1ERJ72.420e-6352.43Magnesium transporter (Fragment) n=1 Tax=Timspurck... [more]
M2Y0171.400e-6245.78Magnesium transporter n=2 Tax=Galdieria sulphurari... [more]
M1VGU35.080e-5447.44Magnesium transporter n=2 Tax=cellular organisms T... [more]
A0A7J7IG996.020e-5246.78Magnesium transporter n=1 Tax=Cyanidiococcus yangm... [more]
A0A168LTR09.810e-3235.85Magnesium transporter n=1 Tax=Absidia glauca TaxID... [more]
A0A1X2IK903.740e-3135.38Magnesium transporter n=1 Tax=Absidia repens TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.128.330coord: 10..83
e-value: 7.7E-15
score: 56.1
NoneNo IPR availableGENE3D1.20.58.340Magnesium transport protein CorA, transmembrane regioncoord: 84..233
e-value: 1.8E-29
score: 104.5
IPR039204Magnesium transporter MRS2-likePANTHERPTHR13890RNA SPLICING PROTEIN MRS2, MITOCHONDRIALcoord: 25..230
IPR039204Magnesium transporter MRS2-likeCDDcd12823Mrs2_Mfm1p-likecoord: 25..231
e-value: 1.99359E-55
score: 178.207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:773904..774763 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2561.t1Ggra2561.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 773904..774763 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2561.t1 ID=Ggra2561.t1|Name=Ggra2561.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=235bp
MEAPAAVPLAAVELSSKKAPKGTFIQKADAAQELGLMVRDLRVVDPSFRS
QAPAILPRQSAIIIHLAHIRIIVLSDRALAFDPTNPAVEYFLPKLQRRLD
APTHPMPFEFRAVEAVLVEIVSTFNATIGTLIPSLDLVLDTLSTTQDFGG
GTVQNCMDRLLPLENALNEFSVKVSQTRAALNEVLVSDEDMSLMYLSSFK
ETGVRRRVDQHDEVEMMLENYMKQIDTVYSETYF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039204MRS2-like