Ggra2486.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2486.t1
Unique NameGgra2486.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length867
Homology
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BLAST of Ggra2486.t1 vs. uniprot
Match: A0A2V3IYC6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYC6_9FLOR)

HSP 1 Score: 283 bits (723), Expect = 4.970e-78
Identity = 183/348 (52.59%), Postives = 227/348 (65.23%), Query Frame = 0 
Query:    1 MALPPEVATLMKALDSLQTASTPTTLASLSRTVARAADDLELVCEETVDPSVSEQLNSYIERARQAVKTARKNARAAALKADRTALIEPPTIEQSESQS-TAGTLAAEINDALRATAAVVSEEIQRSNVAGDVVEDSTRRLRMTTDQHGVYAEGIVSGASTLKSIRRTDLMANFVLVLCFALFFVAAAYVANRRLQSSNVATFIVRPTYKIASMPFRITSWVFKGTINILGSQ---SARSQ-------YPSSTDPQDVKIMTHKALREPRISEDRDFSVGVGDHSLREKDTH-NEEPREGK-----RDTPYVSP-TQHFKDAIEKD-IHKHSGNPPSLPRRNVIDQKI 329
            MALP E   LM AL++L  A++P  LASLSR V+RAADDLELVCEET D ++ +QL+SYI RAR+AVK+AR  AR AAL ADR ALI+PP   +  SQ  TAG LAAEINDALR TAA+V EEIQRSNVAGDVVE+STRRL++T +QH  Y E + SG STLKSIRRT+L ANFV+VLCFALFFVAAAYVANRRLQ+SN+  FIVRPT  IAS PFRIT+W+F+   +   S+   S+RS        + +ST P   K    +A   P  S   D    VG+    +  T    EP++        D P + P T    D +  + + +     P L  R++ D +I
Sbjct:    1 MALPREATALMNALNNLNAAASPAQLASLSRRVSRAADDLELVCEETSDTALFKQLSSYILRAREAVKSARIKARQAALNADRNALIQPPPQSELHSQQGTAGRLAAEINDALRRTAAIVGEEIQRSNVAGDVVEESTRRLKLTRNQHVTYGETVTSGQSTLKSIRRTELFANFVVVLCFALFFVAAAYVANRRLQNSNINAFIVRPTVNIASTPFRITAWLFRTAFSTPDSRYDTSSRSDMHTFDHAHRTSTPPVKEKKTVVEA--PPATSHQADIHAHVGERETSQPATQPGSEPQQSSTPPTAEDKPLIQPDTDLVVDVLNSEQVPRQPLKQPPLQERSLKDSEI 346
The following BLAST results are available for this feature:
BLAST of Ggra2486.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYC64.970e-7852.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 53..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 764..789
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..820
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 627..641
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 556..605
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..369
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 461..496
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 660..674
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 675..691
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 519..541
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 749..763
NoneNo IPR availablePANTHERPTHR12825:SF0VESICLE TRANSPORT PROTEIN SEC20coord: 24..575
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 191..866
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 169..190
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..168
NoneNo IPR availableTMHMMTMhelixcoord: 169..191
IPR005606Sec20PFAMPF03908Sec20coord: 106..194
e-value: 9.0E-9
score: 35.1
IPR005606Sec20PANTHERPTHR12825BNIP1-RELATEDcoord: 24..575

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:469065..471665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2486.t1Ggra2486.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 469065..471665 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2486.t1 ID=Ggra2486.t1|Name=Ggra2486.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=867bp
MALPPEVATLMKALDSLQTASTPTTLASLSRTVARAADDLELVCEETVDP
SVSEQLNSYIERARQAVKTARKNARAAALKADRTALIEPPTIEQSESQST
AGTLAAEINDALRATAAVVSEEIQRSNVAGDVVEDSTRRLRMTTDQHGVY
AEGIVSGASTLKSIRRTDLMANFVLVLCFALFFVAAAYVANRRLQSSNVA
TFIVRPTYKIASMPFRITSWVFKGTINILGSQSARSQYPSSTDPQDVKIM
THKALREPRISEDRDFSVGVGDHSLREKDTHNEEPREGKRDTPYVSPTQH
FKDAIEKDIHKHSGNPPSLPRRNVIDQKIVEDSEPSAGIVDDENAVSAAS
TDLQKSDSNEQSEILLQPSPSHHCQALDDEMSATLPEHAVQETLSTESTS
PRLSEDPNDTEGTDREPFVAAGGDIATDTPQSGGQKLASKKEIEALLYPL
LSGEANPKPVEHMESTSKKIRDDEADKERSDAGSYGAEDDQERAQPELES
PSVVQEYESLLLIPLPSQEKASLSDSVTDGNGTNEPVQSSKPQAAVKKDI
EPSPPDNISDDTSETAKQNEPQAAKKGGKSSPSDNVTDGTSASETAGQTE
QQPVMEKDNEFPPLENLTGETDASETVEQNEPPHAKEKDSSFSPSENLIG
GTGPHETEEQNELNAAKKKDIEPLQSDSVTGSKGTSETVEQSEPHGLKDK
EGEPPQLHGVIGGKGTSETLEQKEQLNTKDIDDITATKETPGVSTDAKRP
KASEQHELWNSSGEKENEAPTEVQFSSLSEASESKETAIDMTATGEVGRI
SSERPGEEEHSEQLPFPASVDIESSKAGYVEGVSEERVECYLSSICLIPG
IDDLLQISAISAWINV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005606Sec20