|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra2486.t1.start1 | Ggra2486.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000005_pilon 469065..469067 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra2486.t1.stop1 | Ggra2486.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000005_pilon 471663..471665 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra2486.t1 ID=Ggra2486.t1|Name=Ggra2486.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=867bp MALPPEVATLMKALDSLQTASTPTTLASLSRTVARAADDLELVCEETVDP SVSEQLNSYIERARQAVKTARKNARAAALKADRTALIEPPTIEQSESQST AGTLAAEINDALRATAAVVSEEIQRSNVAGDVVEDSTRRLRMTTDQHGVY AEGIVSGASTLKSIRRTDLMANFVLVLCFALFFVAAAYVANRRLQSSNVA TFIVRPTYKIASMPFRITSWVFKGTINILGSQSARSQYPSSTDPQDVKIM THKALREPRISEDRDFSVGVGDHSLREKDTHNEEPREGKRDTPYVSPTQH FKDAIEKDIHKHSGNPPSLPRRNVIDQKIVEDSEPSAGIVDDENAVSAAS TDLQKSDSNEQSEILLQPSPSHHCQALDDEMSATLPEHAVQETLSTESTS PRLSEDPNDTEGTDREPFVAAGGDIATDTPQSGGQKLASKKEIEALLYPL LSGEANPKPVEHMESTSKKIRDDEADKERSDAGSYGAEDDQERAQPELES PSVVQEYESLLLIPLPSQEKASLSDSVTDGNGTNEPVQSSKPQAAVKKDI EPSPPDNISDDTSETAKQNEPQAAKKGGKSSPSDNVTDGTSASETAGQTE QQPVMEKDNEFPPLENLTGETDASETVEQNEPPHAKEKDSSFSPSENLIG GTGPHETEEQNELNAAKKKDIEPLQSDSVTGSKGTSETVEQSEPHGLKDK EGEPPQLHGVIGGKGTSETLEQKEQLNTKDIDDITATKETPGVSTDAKRP KASEQHELWNSSGEKENEAPTEVQFSSLSEASESKETAIDMTATGEVGRI SSERPGEEEHSEQLPFPASVDIESSKAGYVEGVSEERVECYLSSICLIPG IDDLLQISAISAWINV* back to topspliced messenger RNA >Ggra2486.t1 ID=Ggra2486.t1|Name=Ggra2486.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2601bp|location=Sequence derived from alignment at tig00000005_pilon:469065..471665+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCGCTTCCGCCAGAAGTAGCAACACTCATGAAGGCTCTGGACAGTCT ACAAACTGCCTCAACACCAACTACTCTTGCTTCTTTATCACGAACCGTTG CACGTGCGGCCGATGATCTCGAATTGGTATGCGAGGAGACTGTGGATCCG TCCGTGTCCGAACAGCTCAATTCTTATATCGAACGAGCACGTCAGGCAGT CAAGACTGCGCGAAAAAACGCTCGTGCTGCAGCTTTGAAAGCCGATCGCA CCGCCCTGATTGAACCCCCAACCATTGAACAAAGTGAGTCGCAAAGCACT GCGGGAACACTGGCTGCTGAGATCAATGACGCCTTGCGTGCGACTGCTGC TGTAGTGAGCGAAGAGATTCAACGCTCGAATGTCGCGGGTGATGTTGTGG AAGATTCGACAAGAAGATTAAGGATGACGACCGATCAACATGGCGTTTAC GCCGAAGGCATTGTCTCAGGTGCATCCACGCTCAAATCAATACGAAGAAC TGATCTTATGGCCAACTTTGTCCTGGTTCTTTGCTTTGCGCTTTTCTTTG TCGCAGCGGCATATGTGGCCAATCGACGTTTACAGAGTAGTAATGTTGCC ACTTTTATCGTCAGGCCTACATACAAGATCGCATCGATGCCATTTAGGAT AACGAGCTGGGTTTTTAAAGGCACCATTAACATTCTTGGCTCTCAATCTG CACGGTCACAATACCCGTCCTCCACTGATCCACAGGATGTCAAAATTATG ACACACAAGGCACTACGGGAGCCTCGAATATCAGAAGATAGAGACTTCTC TGTTGGAGTAGGAGATCACAGTTTAAGAGAAAAGGACACGCACAATGAAG AACCGCGTGAAGGGAAGCGGGATACACCTTATGTATCACCGACTCAACAT TTCAAGGACGCGATTGAGAAAGACATTCATAAACATTCCGGAAACCCTCC ATCCCTCCCGAGAAGGAATGTTATTGATCAAAAGATCGTGGAAGATTCAG AACCGTCTGCGGGTATAGTTGATGATGAAAATGCGGTGTCTGCTGCCTCG ACTGATCTTCAGAAGTCCGACAGCAACGAGCAATCTGAAATTTTGCTGCA ACCCTCACCCTCACATCATTGTCAAGCACTCGATGATGAAATGAGTGCGA CTCTCCCTGAACATGCGGTTCAAGAAACGCTCAGCACGGAATCAACAAGT CCACGGCTAAGTGAAGATCCAAATGATACTGAAGGAACAGATCGGGAGCC TTTCGTCGCCGCCGGTGGAGACATTGCTACAGACACACCCCAGAGTGGAG GGCAAAAGCTCGCTTCCAAAAAGGAAATTGAAGCTCTGTTGTACCCTTTG CTATCCGGAGAAGCCAATCCCAAGCCTGTGGAACACATGGAATCAACGTC AAAGAAAATCAGAGACGATGAAGCTGATAAAGAACGAAGTGATGCCGGGT CATATGGCGCTGAAGATGACCAAGAACGTGCTCAACCAGAACTGGAGAGT CCCAGCGTCGTACAGGAGTATGAATCTCTGTTATTAATCCCACTCCCATC TCAAGAGAAAGCCTCTCTCTCTGATAGCGTGACGGACGGGAATGGTACAA ATGAACCAGTACAGTCAAGCAAGCCACAAGCTGCGGTGAAAAAGGACATT GAACCATCACCACCAGATAACATCAGCGACGATACCAGTGAAACAGCGAA GCAAAACGAACCACAAGCTGCGAAGAAGGGTGGTAAATCATCGCCTTCAG ATAATGTCACCGATGGGACGAGTGCCAGTGAAACTGCAGGCCAAACTGAG CAACAGCCTGTTATGGAGAAGGATAATGAATTCCCGCCATTAGAAAACCT CACCGGTGAGACAGATGCCAGCGAAACAGTAGAGCAAAACGAACCACCGC ATGCGAAGGAGAAGGATAGTAGTTTCTCTCCATCAGAAAACCTCATCGGT GGGACGGGCCCCCATGAAACAGAAGAGCAGAATGAGCTAAATGCTGCGAA GAAGAAGGATATTGAACCGTTGCAATCGGATAGCGTCACCGGCAGCAAAG GTACCAGTGAGACAGTAGAGCAGAGCGAACCACATGGTCTGAAGGACAAA GAAGGTGAACCACCTCAGTTGCATGGGGTCATCGGCGGGAAGGGTACCAG TGAAACATTAGAACAAAAGGAACAACTGAATACGAAAGACATTGATGACA TAACAGCCACAAAAGAGACCCCTGGTGTTTCTACTGATGCTAAAAGGCCT AAAGCAAGTGAGCAGCACGAATTGTGGAATTCAAGCGGGGAGAAGGAGAA TGAAGCTCCGACGGAGGTCCAATTCTCATCACTCAGTGAAGCATCAGAAT CAAAGGAGACAGCAATCGATATGACGGCCACGGGGGAAGTAGGACGAATC AGCAGTGAAAGGCCAGGTGAAGAAGAGCACAGTGAGCAACTTCCATTTCC AGCTTCTGTTGACATCGAAAGTAGTAAAGCTGGATACGTCGAAGGTGTGT CGGAGGAACGAGTTGAATGTTATCTAAGCAGTATTTGCTTGATTCCAGGA ATAGATGATCTACTCCAAATATCCGCCATCTCAGCCTGGATAAATGTTTA G back to topprotein sequence of Ggra2486.t1 >Ggra2486.t1 ID=Ggra2486.t1|Name=Ggra2486.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=867bp
MALPPEVATLMKALDSLQTASTPTTLASLSRTVARAADDLELVCEETVDP SVSEQLNSYIERARQAVKTARKNARAAALKADRTALIEPPTIEQSESQST AGTLAAEINDALRATAAVVSEEIQRSNVAGDVVEDSTRRLRMTTDQHGVY AEGIVSGASTLKSIRRTDLMANFVLVLCFALFFVAAAYVANRRLQSSNVA TFIVRPTYKIASMPFRITSWVFKGTINILGSQSARSQYPSSTDPQDVKIM THKALREPRISEDRDFSVGVGDHSLREKDTHNEEPREGKRDTPYVSPTQH FKDAIEKDIHKHSGNPPSLPRRNVIDQKIVEDSEPSAGIVDDENAVSAAS TDLQKSDSNEQSEILLQPSPSHHCQALDDEMSATLPEHAVQETLSTESTS PRLSEDPNDTEGTDREPFVAAGGDIATDTPQSGGQKLASKKEIEALLYPL LSGEANPKPVEHMESTSKKIRDDEADKERSDAGSYGAEDDQERAQPELES PSVVQEYESLLLIPLPSQEKASLSDSVTDGNGTNEPVQSSKPQAAVKKDI EPSPPDNISDDTSETAKQNEPQAAKKGGKSSPSDNVTDGTSASETAGQTE QQPVMEKDNEFPPLENLTGETDASETVEQNEPPHAKEKDSSFSPSENLIG GTGPHETEEQNELNAAKKKDIEPLQSDSVTGSKGTSETVEQSEPHGLKDK EGEPPQLHGVIGGKGTSETLEQKEQLNTKDIDDITATKETPGVSTDAKRP KASEQHELWNSSGEKENEAPTEVQFSSLSEASESKETAIDMTATGEVGRI SSERPGEEEHSEQLPFPASVDIESSKAGYVEGVSEERVECYLSSICLIPG IDDLLQISAISAWINV* back to topmRNA from alignment at tig00000005_pilon:469065..471665+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra2486.t1 ID=Ggra2486.t1|Name=Ggra2486.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2601bp|location=Sequence derived from alignment at tig00000005_pilon:469065..471665+ (Gracilaria gracilis GNS1m male) ATGGCGCTTCCGCCAGAAGTAGCAACACTCATGAAGGCTCTGGACAGTCT
ACAAACTGCCTCAACACCAACTACTCTTGCTTCTTTATCACGAACCGTTG
CACGTGCGGCCGATGATCTCGAATTGGTATGCGAGGAGACTGTGGATCCG
TCCGTGTCCGAACAGCTCAATTCTTATATCGAACGAGCACGTCAGGCAGT
CAAGACTGCGCGAAAAAACGCTCGTGCTGCAGCTTTGAAAGCCGATCGCA
CCGCCCTGATTGAACCCCCAACCATTGAACAAAGTGAGTCGCAAAGCACT
GCGGGAACACTGGCTGCTGAGATCAATGACGCCTTGCGTGCGACTGCTGC
TGTAGTGAGCGAAGAGATTCAACGCTCGAATGTCGCGGGTGATGTTGTGG
AAGATTCGACAAGAAGATTAAGGATGACGACCGATCAACATGGCGTTTAC
GCCGAAGGCATTGTCTCAGGTGCATCCACGCTCAAATCAATACGAAGAAC
TGATCTTATGGCCAACTTTGTCCTGGTTCTTTGCTTTGCGCTTTTCTTTG
TCGCAGCGGCATATGTGGCCAATCGACGTTTACAGAGTAGTAATGTTGCC
ACTTTTATCGTCAGGCCTACATACAAGATCGCATCGATGCCATTTAGGAT
AACGAGCTGGGTTTTTAAAGGCACCATTAACATTCTTGGCTCTCAATCTG
CACGGTCACAATACCCGTCCTCCACTGATCCACAGGATGTCAAAATTATG
ACACACAAGGCACTACGGGAGCCTCGAATATCAGAAGATAGAGACTTCTC
TGTTGGAGTAGGAGATCACAGTTTAAGAGAAAAGGACACGCACAATGAAG
AACCGCGTGAAGGGAAGCGGGATACACCTTATGTATCACCGACTCAACAT
TTCAAGGACGCGATTGAGAAAGACATTCATAAACATTCCGGAAACCCTCC
ATCCCTCCCGAGAAGGAATGTTATTGATCAAAAGATCGTGGAAGATTCAG
AACCGTCTGCGGGTATAGTTGATGATGAAAATGCGGTGTCTGCTGCCTCG
ACTGATCTTCAGAAGTCCGACAGCAACGAGCAATCTGAAATTTTGCTGCA
ACCCTCACCCTCACATCATTGTCAAGCACTCGATGATGAAATGAGTGCGA
CTCTCCCTGAACATGCGGTTCAAGAAACGCTCAGCACGGAATCAACAAGT
CCACGGCTAAGTGAAGATCCAAATGATACTGAAGGAACAGATCGGGAGCC
TTTCGTCGCCGCCGGTGGAGACATTGCTACAGACACACCCCAGAGTGGAG
GGCAAAAGCTCGCTTCCAAAAAGGAAATTGAAGCTCTGTTGTACCCTTTG
CTATCCGGAGAAGCCAATCCCAAGCCTGTGGAACACATGGAATCAACGTC
AAAGAAAATCAGAGACGATGAAGCTGATAAAGAACGAAGTGATGCCGGGT
CATATGGCGCTGAAGATGACCAAGAACGTGCTCAACCAGAACTGGAGAGT
CCCAGCGTCGTACAGGAGTATGAATCTCTGTTATTAATCCCACTCCCATC
TCAAGAGAAAGCCTCTCTCTCTGATAGCGTGACGGACGGGAATGGTACAA
ATGAACCAGTACAGTCAAGCAAGCCACAAGCTGCGGTGAAAAAGGACATT
GAACCATCACCACCAGATAACATCAGCGACGATACCAGTGAAACAGCGAA
GCAAAACGAACCACAAGCTGCGAAGAAGGGTGGTAAATCATCGCCTTCAG
ATAATGTCACCGATGGGACGAGTGCCAGTGAAACTGCAGGCCAAACTGAG
CAACAGCCTGTTATGGAGAAGGATAATGAATTCCCGCCATTAGAAAACCT
CACCGGTGAGACAGATGCCAGCGAAACAGTAGAGCAAAACGAACCACCGC
ATGCGAAGGAGAAGGATAGTAGTTTCTCTCCATCAGAAAACCTCATCGGT
GGGACGGGCCCCCATGAAACAGAAGAGCAGAATGAGCTAAATGCTGCGAA
GAAGAAGGATATTGAACCGTTGCAATCGGATAGCGTCACCGGCAGCAAAG
GTACCAGTGAGACAGTAGAGCAGAGCGAACCACATGGTCTGAAGGACAAA
GAAGGTGAACCACCTCAGTTGCATGGGGTCATCGGCGGGAAGGGTACCAG
TGAAACATTAGAACAAAAGGAACAACTGAATACGAAAGACATTGATGACA
TAACAGCCACAAAAGAGACCCCTGGTGTTTCTACTGATGCTAAAAGGCCT
AAAGCAAGTGAGCAGCACGAATTGTGGAATTCAAGCGGGGAGAAGGAGAA
TGAAGCTCCGACGGAGGTCCAATTCTCATCACTCAGTGAAGCATCAGAAT
CAAAGGAGACAGCAATCGATATGACGGCCACGGGGGAAGTAGGACGAATC
AGCAGTGAAAGGCCAGGTGAAGAAGAGCACAGTGAGCAACTTCCATTTCC
AGCTTCTGTTGACATCGAAAGTAGTAAAGCTGGATACGTCGAAGGTGTGT
CGGAGGAACGAGTTGAATGTTATCTAAGCAGTATTTGCTTGATTCCAGGA
ATAGATGATCTACTCCAAATATCCGCCATCTCAGCCTGGATAAATGTTTA
G back to topCoding sequence (CDS) from alignment at tig00000005_pilon:469065..471665+ >Ggra2486.t1 ID=Ggra2486.t1|Name=Ggra2486.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2601bp|location=Sequence derived from alignment at tig00000005_pilon:469065..471665+ (Gracilaria gracilis GNS1m male) ATGGCGCTTCCGCCAGAAGTAGCAACACTCATGAAGGCTCTGGACAGTCT ACAAACTGCCTCAACACCAACTACTCTTGCTTCTTTATCACGAACCGTTG CACGTGCGGCCGATGATCTCGAATTGGTATGCGAGGAGACTGTGGATCCG TCCGTGTCCGAACAGCTCAATTCTTATATCGAACGAGCACGTCAGGCAGT CAAGACTGCGCGAAAAAACGCTCGTGCTGCAGCTTTGAAAGCCGATCGCA CCGCCCTGATTGAACCCCCAACCATTGAACAAAGTGAGTCGCAAAGCACT GCGGGAACACTGGCTGCTGAGATCAATGACGCCTTGCGTGCGACTGCTGC TGTAGTGAGCGAAGAGATTCAACGCTCGAATGTCGCGGGTGATGTTGTGG AAGATTCGACAAGAAGATTAAGGATGACGACCGATCAACATGGCGTTTAC GCCGAAGGCATTGTCTCAGGTGCATCCACGCTCAAATCAATACGAAGAAC TGATCTTATGGCCAACTTTGTCCTGGTTCTTTGCTTTGCGCTTTTCTTTG TCGCAGCGGCATATGTGGCCAATCGACGTTTACAGAGTAGTAATGTTGCC ACTTTTATCGTCAGGCCTACATACAAGATCGCATCGATGCCATTTAGGAT AACGAGCTGGGTTTTTAAAGGCACCATTAACATTCTTGGCTCTCAATCTG CACGGTCACAATACCCGTCCTCCACTGATCCACAGGATGTCAAAATTATG ACACACAAGGCACTACGGGAGCCTCGAATATCAGAAGATAGAGACTTCTC TGTTGGAGTAGGAGATCACAGTTTAAGAGAAAAGGACACGCACAATGAAG AACCGCGTGAAGGGAAGCGGGATACACCTTATGTATCACCGACTCAACAT TTCAAGGACGCGATTGAGAAAGACATTCATAAACATTCCGGAAACCCTCC ATCCCTCCCGAGAAGGAATGTTATTGATCAAAAGATCGTGGAAGATTCAG AACCGTCTGCGGGTATAGTTGATGATGAAAATGCGGTGTCTGCTGCCTCG ACTGATCTTCAGAAGTCCGACAGCAACGAGCAATCTGAAATTTTGCTGCA ACCCTCACCCTCACATCATTGTCAAGCACTCGATGATGAAATGAGTGCGA CTCTCCCTGAACATGCGGTTCAAGAAACGCTCAGCACGGAATCAACAAGT CCACGGCTAAGTGAAGATCCAAATGATACTGAAGGAACAGATCGGGAGCC TTTCGTCGCCGCCGGTGGAGACATTGCTACAGACACACCCCAGAGTGGAG GGCAAAAGCTCGCTTCCAAAAAGGAAATTGAAGCTCTGTTGTACCCTTTG CTATCCGGAGAAGCCAATCCCAAGCCTGTGGAACACATGGAATCAACGTC AAAGAAAATCAGAGACGATGAAGCTGATAAAGAACGAAGTGATGCCGGGT CATATGGCGCTGAAGATGACCAAGAACGTGCTCAACCAGAACTGGAGAGT CCCAGCGTCGTACAGGAGTATGAATCTCTGTTATTAATCCCACTCCCATC TCAAGAGAAAGCCTCTCTCTCTGATAGCGTGACGGACGGGAATGGTACAA ATGAACCAGTACAGTCAAGCAAGCCACAAGCTGCGGTGAAAAAGGACATT GAACCATCACCACCAGATAACATCAGCGACGATACCAGTGAAACAGCGAA GCAAAACGAACCACAAGCTGCGAAGAAGGGTGGTAAATCATCGCCTTCAG ATAATGTCACCGATGGGACGAGTGCCAGTGAAACTGCAGGCCAAACTGAG CAACAGCCTGTTATGGAGAAGGATAATGAATTCCCGCCATTAGAAAACCT CACCGGTGAGACAGATGCCAGCGAAACAGTAGAGCAAAACGAACCACCGC ATGCGAAGGAGAAGGATAGTAGTTTCTCTCCATCAGAAAACCTCATCGGT GGGACGGGCCCCCATGAAACAGAAGAGCAGAATGAGCTAAATGCTGCGAA GAAGAAGGATATTGAACCGTTGCAATCGGATAGCGTCACCGGCAGCAAAG GTACCAGTGAGACAGTAGAGCAGAGCGAACCACATGGTCTGAAGGACAAA GAAGGTGAACCACCTCAGTTGCATGGGGTCATCGGCGGGAAGGGTACCAG TGAAACATTAGAACAAAAGGAACAACTGAATACGAAAGACATTGATGACA TAACAGCCACAAAAGAGACCCCTGGTGTTTCTACTGATGCTAAAAGGCCT AAAGCAAGTGAGCAGCACGAATTGTGGAATTCAAGCGGGGAGAAGGAGAA TGAAGCTCCGACGGAGGTCCAATTCTCATCACTCAGTGAAGCATCAGAAT CAAAGGAGACAGCAATCGATATGACGGCCACGGGGGAAGTAGGACGAATC AGCAGTGAAAGGCCAGGTGAAGAAGAGCACAGTGAGCAACTTCCATTTCC AGCTTCTGTTGACATCGAAAGTAGTAAAGCTGGATACGTCGAAGGTGTGT CGGAGGAACGAGTTGAATGTTATCTAAGCAGTATTTGCTTGATTCCAGGA ATAGATGATCTACTCCAAATATCCGCCATCTCAGCCTGGATAAATGTTTA G back to top
|