Ggra2465.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2465.t1
Unique NameGgra2465.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length200
Homology
BLAST of Ggra2465.t1 vs. uniprot
Match: A0A2V3IYH9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYH9_9FLOR)

HSP 1 Score: 247 bits (630), Expect = 1.390e-80
Identity = 114/186 (61.29%), Postives = 143/186 (76.88%), Query Frame = 0
Query:    1 MAPVIHPILEGLFNLVVAWALLLLGFTSEDNPPRTRPPSAALFFAGTAFLTNIVYLPYLIFRQKPTSEARSPTTALESFGESIYLPVFCTALTLISAAWALWARSEYGDIQTRIASFKNILFSDILAYSFGVDLIVFSLFQSWLVRDDANRRKWKHDSIKAVAVNATAIPFFGLAYYLFQRARHTS 186
            +AP +HP+LEG+F+++VAWALLLLGF SEDNPPR     A  F   TAFLTNI YLPYLI R KPT     P+TAL+  GESIYLP+F  ++   SA WA++AR E+GD+ TR +SFK+I  S+ILAYSFGVD++ FSLFQSWLVRDDANRR W+ +S+K  A+ +T +PF GLA+YL QRARH +
Sbjct:    5 LAPTLHPMLEGIFHVIVAWALLLLGFVSEDNPPRKSSLPAQPFLIATAFLTNIFYLPYLILRAKPTDNLLPPSTALQELGESIYLPIFSLSVLGASAVWAVFARPEFGDLMTRFSSFKHIFSSNILAYSFGVDVLTFSLFQSWLVRDDANRRTWRSESMKRTAIQSTLVPFLGLAFYLIQRARHAT 190          
BLAST of Ggra2465.t1 vs. uniprot
Match: A0A7C3VK05 (Uncharacterized protein n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A7C3VK05_9CYAN)

HSP 1 Score: 157 bits (396), Expect = 2.110e-44
Identity = 85/181 (46.96%), Postives = 108/181 (59.67%), Query Frame = 0
Query:    1 MAPVIHPILEGLFNLVVAWALLLLGFTSEDNPPRTRPPSAALFFAGTAFLTNIVYLPYLIFRQKPTSEARSPTTALESFGESIYLPVFCTALTLISAAWALWARSEYGDIQTRIASFKNILFSDILAYSFGVDLIVFSLFQSWLVRDDANRRKWKHDSIKAVAVNATAIPFFGLAYYLFQR 181
            +APVI+P LEGLFN+VVAW LL  GF  +    R    S   F  GTAFLTN+ YL +L  RQ      + P T  E F ES +LP+F TA+ L S AW LWAR E+GD+  R  S   ++ SD LAYSF +D++VF LFQ WLV+DD  RR + +  +  V      +P FGL  Y  +R
Sbjct:   66 VAPVINPGLEGLFNIVVAWGLLFWGFLIDGRQQRF---SIVPFLIGTAFLTNVFYLLWLAVRQDNPDVPQLPLTRAEKFTESKFLPIFLTAVVLASLAWGLWARPEFGDLTARWESLLTLISSDRLAYSFWIDMMVFWLFQGWLVKDDMVRRNYDNLGLLWVV---RILPLFGLVIYFLKR 240          
BLAST of Ggra2465.t1 vs. uniprot
Match: hypothetical protein n=2 Tax=unclassified Anabaena TaxID=2619674 RepID=UPI000AAA0412 (hypothetical protein n=2 Tax=unclassified Anabaena TaxID=2619674 RepID=UPI000AAA0412)

HSP 1 Score: 155 bits (392), Expect = 1.110e-43
Identity = 80/180 (44.44%), Postives = 109/180 (60.56%), Query Frame = 0
Query:    2 APVIHPILEGLFNLVVAWALLLLGFTSEDNPPRTRPPSAALFFAGTAFLTNIVYLPYLIFRQKPTSEARSPTTALESFGESIYLPVFCTALTLISAAWALWARSEYGDIQTRIASFKNILFSDILAYSFGVDLIVFSLFQSWLVRDDANRRKWKHDSIKAVAVNATAIPFFGLAYYLFQR 181
            APV HP LEGLFN+VV W LL  GF  +    R    S   F  GTAFLTN+ +LP+L  RQ  + +  +  T +E  GES  LP     + ++S  WA +AR EYGD+ TR  +   +LFSD LAYSF +D++VF  FQSWLV+DD  RR+W ++ +  +      +PF+GL  Y ++R
Sbjct:   81 APVNHPALEGLFNIVVTWGLLFWGFVIDGRNQRF---SIVTFLIGTAFLTNLFFLPWLGLRQPNSEKPTNSLTFIEKIGESRTLPTILAVVFVVSLVWAGFARPEYGDLTTRWQALLELLFSDRLAYSFLIDMLVFWFFQSWLVKDDMKRRQWHNEKVLWLV---RFVPFWGLIIYFWKR 254          
BLAST of Ggra2465.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Phormidium tenue TaxID=126344 RepID=UPI001A7E263D (hypothetical protein n=1 Tax=Phormidium tenue TaxID=126344 RepID=UPI001A7E263D)

HSP 1 Score: 154 bits (388), Expect = 4.540e-43
Identity = 86/181 (47.51%), Postives = 112/181 (61.88%), Query Frame = 0
Query:    1 MAPVIHPILEGLFNLVVAWALLLLGFTSEDNPPRTRPPSAALFFAGTAFLTNIVYLPYLIFRQKPTSEARSPTTALESFGESIYLPVFCTALTLISAAWALWARSEYGDIQTRIASFKNILFSDILAYSFGVDLIVFSLFQSWLVRDDANRRKWKHDSIKAVAVNATAIPFFGLAYYLFQR 181
            +APV+HP+LEGLFN+ + W LL  GF  +    + R P    F  GTA LTN+ YLP+L  RQ P  +     + LE   ES  LP+    + L S AWA WAR E+GD+  R  + + +L SD LAYSF VDL+VF LFQ+WLV DD  RR+W HD+ KA+ + A  +PF GL  YL +R
Sbjct:   79 VAPVLHPMLEGLFNITIVWGLLFWGFLIDGR--QQRLPFIP-FLIGTALLTNVFYLPWLALRQ-PNPDPPEAVSPLEKLAESRALPLILATVALASIAWAAWARPEFGDLPHRWQALRQLLESDRLAYSFLVDLLVFWLFQAWLVTDDMVRRQW-HDA-KALWI-ARLVPFVGLVIYLLRR 252          
BLAST of Ggra2465.t1 vs. uniprot
Match: A0A1L9QX22 (Uncharacterized protein n=4 Tax=Roseofilum TaxID=1233426 RepID=A0A1L9QX22_9CYAN)

HSP 1 Score: 153 bits (386), Expect = 6.900e-43
Identity = 85/180 (47.22%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    2 APVIHPILEGLFNLVVAWALLLLGFTSEDNPPRTRPPSAALFFAGTAFLTNIVYLPYLIFRQKPTSEARSPTTALESFGESIYLPVFCTALTLISAAWALWARSEYGDIQTRIASFKNILFSDILAYSFGVDLIVFSLFQSWLVRDDANRRKWKHDSIKAVAVNATAIPFFGLAYYLFQR 181
            APV+HP LEGLFN+VVAWALLL GF  +    R        F  G AFLTN+ YLP+L  R         P + LE   ES    +F + + LIS +WA++AR E+GDI  R      I+ SD LAYSF +DL+ FSLFQSWLV DD  RR+W + ++  V      IPFFGL  Y   R
Sbjct:   60 APVLHPALEGLFNIVVAWALLLWGFLVDGRGQRWP---MFPFLVGIAFLTNVFYLPWLGIRHSNPELGDRPLSRLEQVTESRGWGIFLSVIVLISISWAMFARPEFGDIGQRSQELIQIVGSDRLAYSFAIDLLFFSLFQSWLVNDDMARRQWHNSTLLWVT---RLIPFFGLVVYFLLR 233          
BLAST of Ggra2465.t1 vs. uniprot
Match: A0A7C3PFX5 (Uncharacterized protein n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3PFX5_9CYAN)

HSP 1 Score: 152 bits (385), Expect = 1.150e-42
Identity = 83/181 (45.86%), Postives = 109/181 (60.22%), Query Frame = 0
Query:    1 MAPVIHPILEGLFNLVVAWALLLLGFTSEDNPPRTRPPSAALFFAGTAFLTNIVYLPYLIFRQKPTSEARSPTTALESFGESIYLPVFCTALTLISAAWALWARSEYGDIQTRIASFKNILFSDILAYSFGVDLIVFSLFQSWLVRDDANRRKWKHDSIKAVAVNATAIPFFGLAYYLFQR 181
            +APV++P LEGLF+LV+AW LL  GF  +    R        F  GTAFLTN+ YLP+L  R+        P T LE  GES +LP+    L  ++  WA+ AR E+G++  R  +   +L SD L YSF VDL VF LFQ WLV DD  RRKW++  +  +A     +PFFGLA+YLF+R
Sbjct:   76 IAPVLNPALEGLFHLVIAWGLLFWGFMVDGRNQRLP---ILPFLLGTAFLTNVFYLPWLGVRRSNPEPPTPPLTRLEQLGESRFLPIAIIGLAGVALLWAMLARPEWGNLSDRWEALLTLLRSDRLTYSFVVDLGVFWLFQGWLVSDDMARRKWQNRQMLWLA---RLLPFFGLAFYLFKR 250          
BLAST of Ggra2465.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI000375DD98 (hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI000375DD98)

HSP 1 Score: 151 bits (382), Expect = 4.460e-42
Identity = 85/193 (44.04%), Postives = 109/193 (56.48%), Query Frame = 0
Query:    2 APVIHPILEGLFNLVVAWALLLLGFTSEDNPPRTRPPSAALFFAGTAFLTNIVYLPYLIFRQKPTSEARSPTTALESFGESIYLPVFCTALTLISAAWALWARSEYGDIQTRIASFKNILFSDILAYSFGVDLIVFSLFQSWLVRDDANRRKWKHDSIKAVAVNATAIPFFGLAYYLFQRARHTSYSKQEQTS 194
            AP ++P LEGLFNLVV W LL  GF S+    + R P  A F  GTAFLTN+ YLP+L  RQ      +   T LE   ES   P+  T     S AWA WAR E+GD++ R  +   +L +D LA+SF +D+IVF +FQSWLV DD  RR W+ D+     V    +P  GL  YLF+R    +   +  TS
Sbjct:   81 APALNPALEGLFNLVVTWGLLFWGFLSDGR--QQRFPIIA-FMIGTAFLTNVFYLPWLALRQPNPHTPKGSLTFLEKIAESRVFPLVLTGAVAASVAWATWARPEFGDLRARWEALLELLSTDRLAHSFFIDIIVFWIFQSWLVADDMARRNWR-DATALWTVRL--VPLIGLVVYLFRRPSLPAQPSEVNTS 267          
BLAST of Ggra2465.t1 vs. uniprot
Match: A0A0M4TYB1 (Uncharacterized protein n=1 Tax=Nostoc piscinale CENA21 TaxID=224013 RepID=A0A0M4TYB1_9NOSO)

HSP 1 Score: 150 bits (379), Expect = 1.040e-41
Identity = 81/180 (45.00%), Postives = 108/180 (60.00%), Query Frame = 0
Query:    2 APVIHPILEGLFNLVVAWALLLLGFTSEDNPPRTRPPSAALFFAGTAFLTNIVYLPYLIFRQKPTSEARSPTTALESFGESIYLPVFCTALTLISAAWALWARSEYGDIQTRIASFKNILFSDILAYSFGVDLIVFSLFQSWLVRDDANRRKWKHDSIKAVAVNATAIPFFGLAYYLFQR 181
            APV +P LEGLFN+V++W LL  GF  +    R        F  GTA LTN+ +LP+L  RQ      ++  T +E  GES  LP+    + ++S +WA+  R EYGDI TR      +LFSD LAYSF VD++VF LFQSWLV+DD  RR+W ++ I  +      IPF+GL  YL+ R
Sbjct:   77 APVSNPTLEGLFNIVMSWGLLFWGFIIDGRNQRFP---IITFLLGTALLTNVFFLPWLGLRQANPQAPKNALTFVEKVGESRVLPLVLAGVFVVSLSWAVLGRPEYGDITTRWQGLLELLFSDRLAYSFVVDMLVFWLFQSWLVKDDMARRQWNNEKILWLV---RLIPFWGLIIYLWLR 250          
BLAST of Ggra2465.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Anabaena azotica TaxID=197653 RepID=UPI001688E375 (hypothetical protein n=1 Tax=Anabaena azotica TaxID=197653 RepID=UPI001688E375)

HSP 1 Score: 148 bits (373), Expect = 9.950e-41
Identity = 77/180 (42.78%), Postives = 107/180 (59.44%), Query Frame = 0
Query:    2 APVIHPILEGLFNLVVAWALLLLGFTSEDNPPRTRPPSAALFFAGTAFLTNIVYLPYLIFRQKPTSEARSPTTALESFGESIYLPVFCTALTLISAAWALWARSEYGDIQTRIASFKNILFSDILAYSFGVDLIVFSLFQSWLVRDDANRRKWKHDSIKAVAVNATAIPFFGLAYYLFQR 181
            A V +P LEGLFN+VV W +L  GF  +    R    S   F  GTAFLTN+ +LP+L  RQ       +P +  E  GES   P     + ++S  W ++AR EYGD+ TR  +  N+LF+D LAYSF +D++VF LFQSWLV+DD  RR+W ++ +  +      +PF+GL  Y +QR
Sbjct:   81 AAVNNPALEGLFNIVVTWGILFWGFVVDGRNQRF---SIITFLIGTAFLTNLFFLPWLGLRQPNPQAPTTPLSFAEKIGESRIFPSVLAVVFVVSLVWGVFARPEYGDLITRWEALLNLLFTDRLAYSFLIDMLVFWLFQSWLVKDDMARRQWHNEKVLWLV---RLLPFWGLIIYFWQR 254          
BLAST of Ggra2465.t1 vs. uniprot
Match: A0A1Z4IF36 (Uncharacterized protein n=2 Tax=unclassified Nostoc TaxID=2593658 RepID=A0A1Z4IF36_9NOSO)

HSP 1 Score: 147 bits (371), Expect = 1.480e-40
Identity = 77/180 (42.78%), Postives = 106/180 (58.89%), Query Frame = 0
Query:    2 APVIHPILEGLFNLVVAWALLLLGFTSEDNPPRTRPPSAALFFAGTAFLTNIVYLPYLIFRQKPTSEARSPTTALESFGESIYLPVFCTALTLISAAWALWARSEYGDIQTRIASFKNILFSDILAYSFGVDLIVFSLFQSWLVRDDANRRKWKHDSIKAVAVNATAIPFFGLAYYLFQR 181
            AP+ +P LEGLFN+VV W LL  GF  +    R    S   F  GTAFLTN+ +LP+L  RQ     +    T +E  GES   P     + ++   WA +AR EYGD+ TR  +   +LF+D LAYSF +D++VF +FQSWLV+DD  RR+W +D +  +      +PF+GL  Y +QR
Sbjct:   73 APINNPALEGLFNIVVTWGLLFWGFVIDGRNQRF---SIIPFLIGTAFLTNLFFLPWLGLRQPNPQVSTKDLTVVEKVGESRIFPSILALVFVVCFIWAGFARPEYGDLNTRWEALLKLLFTDRLAYSFLIDMLVFWVFQSWLVKDDMARRQWHNDQVLWIV---RFVPFWGLIIYFWQR 246          
The following BLAST results are available for this feature:
BLAST of Ggra2465.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYH91.390e-8061.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7C3VK052.110e-4446.96Uncharacterized protein n=2 Tax=Oscillatoriales Ta... [more]
hypothetical protein n=2 Tax=unclassified Anabaena TaxID=2619674 RepID=UPI000AAA04121.110e-4344.44hypothetical protein n=2 Tax=unclassified Anabaena... [more]
hypothetical protein n=1 Tax=Phormidium tenue TaxID=126344 RepID=UPI001A7E263D4.540e-4347.51hypothetical protein n=1 Tax=Phormidium tenue TaxI... [more]
A0A1L9QX226.900e-4347.22Uncharacterized protein n=4 Tax=Roseofilum TaxID=1... [more]
A0A7C3PFX51.150e-4245.86Uncharacterized protein n=1 Tax=Oscillatoriales cy... [more]
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI000375DD984.460e-4244.04hypothetical protein n=1 Tax=Oscillatoria sp. PCC ... [more]
A0A0M4TYB11.040e-4145.00Uncharacterized protein n=1 Tax=Nostoc piscinale C... [more]
hypothetical protein n=1 Tax=Anabaena azotica TaxID=197653 RepID=UPI001688E3759.950e-4142.78hypothetical protein n=1 Tax=Anabaena azotica TaxI... [more]
A0A1Z4IF361.480e-4042.78Uncharacterized protein n=2 Tax=unclassified Nosto... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36367TRANSMEMBRANE PROTEINcoord: 2..181
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 141..160
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 180..199
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 101..119
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 161..179
NoneNo IPR availableTMHMMTMhelixcoord: 124..146
NoneNo IPR availableTMHMMTMhelixcoord: 161..179
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 81..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:399077..399676 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2465.t1Ggra2465.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 399077..399676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2465.t1 ID=Ggra2465.t1|Name=Ggra2465.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=200bp
MAPVIHPILEGLFNLVVAWALLLLGFTSEDNPPRTRPPSAALFFAGTAFL
TNIVYLPYLIFRQKPTSEARSPTTALESFGESIYLPVFCTALTLISAAWA
LWARSEYGDIQTRIASFKNILFSDILAYSFGVDLIVFSLFQSWLVRDDAN
RRKWKHDSIKAVAVNATAIPFFGLAYYLFQRARHTSYSKQEQTSASKTK*
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