Ggra2464.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2464.t1
Unique NameGgra2464.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length412
Homology
BLAST of Ggra2464.t1 vs. uniprot
Match: A0A2V3IY92 (PSII_BNR domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY92_9FLOR)

HSP 1 Score: 688 bits (1776), Expect = 7.990e-248
Identity = 338/412 (82.04%), Postives = 373/412 (90.53%), Query Frame = 0
Query:    1 MSPHLFFIASAPLRVTTFTPR-SHATARRRDAART-QMSFSVDQPDSSFKLHRRSFLSAAALAALQLPAAASKAERVLTPPAWTQVELDSGETIYDIDFSPVDPSHGFLVGSRGTVAETFDRGVTWQPRTFARLDADEELNYRFEVVTFRGQEGWVIGKPSLLLHTSDSGKSWERVPLSPKLPGEPVAITALGPQKAEMTTNAGAVYVTENSGRNWKAQVRETIDATLNRTISSGVTGASYFTGSIIQVLRDAYGAYLAISSRGNFFLTWKPGQDFWIPHARDSSRRIQSMGFVNNDVNDGVWMATRGGGLSFTEKNPELESTELLKFNKVDIRSGGYGILDVAFRPDTSEVWAAIGGGTLYRSEDGGRSWKRDDKTGKVGANIYRIKFFGKDTAFALGSNGVVLRYNPEAT 410
            M P  FF++S PLRVT+F+ R   A+A+RR A RT + S S  + D++ KL RR+FLS  ALAALQL A  + AERVLTPPAW QV+LDS ETIYD+DFSPVDP+HGFLVGSRGTVAETFD+G TW+PR+FARLDADEELNYRFEVVTFRG+EGWVIGKPSLLLHT+DSGKSWERVPLSPKLPGEPVAITALGPQKAEMTTNAGAVYVTEN GRNWKAQVRETIDATLNRTISSGVTGASYFTGSIIQVLRDAYGAYLAISSRGNFFLTWKPGQ+FWIPHARDSSRRIQSMGFV+NDVN+GVWMATRGGGL+FT+K P+LEST+LLKFNKVDIRSGGYGILDVAFRP TSE WAA+GGGTLY S+DGGR+W+RDDKTGKVG NIYRIKFF KD  FALG+NGVVLR++   +
Sbjct:   13 MLPQFFFVSSVPLRVTSFSARLPSASAKRRHAHRTARASMSAHKSDAAIKLPRRTFLSTTALAALQLSATPANAERVLTPPAWRQVDLDSSETIYDMDFSPVDPAHGFLVGSRGTVAETFDQGQTWEPRSFARLDADEELNYRFEVVTFRGKEGWVIGKPSLLLHTTDSGKSWERVPLSPKLPGEPVAITALGPQKAEMTTNAGAVYVTENGGRNWKAQVRETIDATLNRTISSGVTGASYFTGSIIQVLRDAYGAYLAISSRGNFFLTWKPGQEFWIPHARDSSRRIQSMGFVSNDVNEGVWMATRGGGLAFTDKQPDLESTDLLKFNKVDIRSGGYGILDVAFRPGTSEAWAAVGGGTLYYSQDGGRTWRRDDKTGKVGTNIYRIKFFDKDNGFALGANGVVLRFDASGS 424          
BLAST of Ggra2464.t1 vs. uniprot
Match: A0A1X6P5U5 (PSII_BNR domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5U5_PORUM)

HSP 1 Score: 474 bits (1219), Expect = 8.850e-163
Identity = 225/341 (65.98%), Postives = 268/341 (78.59%), Query Frame = 0
Query:   68 AASKAERVLTPPAWTQVELDSGETIYDIDFSPVDPSHGFLVGSRGTVAETFDRGVTWQPRTFARLDADEELNYRFEVVTFRGQEGWVIGKPSLLLHTSDSGKSWERVPLSPKLPGEPVAITALGPQKAEMTTNAGAVYVTENSGRNWKAQVRETIDATLNRTISSGVTGASYFTGSIIQVLRDAYGAYLAISSRGNFFLTWKPGQDFWIPHARDSSRRIQSMGFVNNDVNDGVWMATRGGGLSFTEKNPELESTELLKFNKVDIRSGGYGILDVAFRPDTSEVWAAIGGGTLYRSEDGGRSWKRDDKTGKVGANIYRIKFFGKDTAFALGSNGVVLRYNPE 408
            AAS A  V+T P+W QV L +  T++D+ FSP DP HG+LVGSRGTV ET D G +W+ R F  LDAD+E+NYRFEVVTFRG E                    ERVPLSPKLPG+PV ITAL  + AEMTT AGAVY+TEN GRNWKA V+ETIDATLNRTISSGV+GASY+TG+II VLRDA G+YLA+SSRGNFFLTW PGQDFW+PH RDSSRRIQ+MGFV +DVN G+WM+TRGGGL  T   P+L ++E L FNK D++SGGYGILDV++RP T+EVWAA+GGG LY S+DGG+S+K D   GKVG N+Y+IKFF KD AFALG++GV+LRYNP+
Sbjct:  106 AASAAPSVMTKPSWEQVPLTADSTLFDMSFSPTDPKHGWLVGSRGTVLETNDGGDSWKARAFQNLDADDEINYRFEVVTFRGDEXXXXXXXXXXXXXXXXXXXXERVPLSPKLPGDPVLITALDKEAAEMTTTAGAVYLTENGGRNWKALVKETIDATLNRTISSGVSGASYYTGTIISVLRDAQGSYLAVSSRGNFFLTWSPGQDFWVPHGRDSSRRIQAMGFVRDDVNQGLWMSTRGGGLQTTASGPDLTASETLPFNKADVKSGGYGILDVSYRPGTNEVWAALGGGALYVSKDGGKSFKPDKSVGKVGTNLYKIKFFSKDVAFALGASGVLLRYNPQ 446          
BLAST of Ggra2464.t1 vs. uniprot
Match: R7Q714 (Photosystem II stability/assembly factor HCF136 (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q714_CHOCR)

HSP 1 Score: 445 bits (1144), Expect = 1.890e-154
Identity = 212/245 (86.53%), Postives = 233/245 (95.10%), Query Frame = 0
Query:  167 SGKSWERVPLSPKLPGEPVAITALGPQKAEMTTNAGAVYVTENSGRNWKAQVRETIDATLNRTISSGVTGASYFTGSIIQVLRDAYGAYLAISSRGNFFLTWKPGQDFWIPHARDSSRRIQSMGFVNNDVNDGVWMATRGGGLSFTEKNPELESTELLKFNKVDIRSGGYGILDVAFRPDTSEVWAAIGGGTLYRSEDGGRSWKRDDKTGKVGANIYRIKFFGKDTAFALGSNGVVLRYNPEATA 411
            SGK+WERVPLSPKLPGEPV+ITALGPQ+AEMTTNAGAVY+TEN+GRNWKAQVRETIDATLNRTISSGV+GASYFTGSII VLRDAYGAYLAISSRGNFFLTWKPGQDFWIPHARDSSRRIQ+MGFVNN+VNDGVWMATRGGGL+FT+ NP+LESTELLKFNKVDIR+GGYGILDVAFRP + EVWAAIGGG+LYRS D G+SWKRD++  KVGANIY+IKFF KDTAFALGSNG+VL+Y+   TA
Sbjct:    2 SGKTWERVPLSPKLPGEPVSITALGPQRAEMTTNAGAVYMTENAGRNWKAQVRETIDATLNRTISSGVSGASYFTGSIISVLRDAYGAYLAISSRGNFFLTWKPGQDFWIPHARDSSRRIQAMGFVNNNVNDGVWMATRGGGLAFTDANPDLESTELLKFNKVDIRAGGYGILDVAFRPGSKEVWAAIGGGSLYRSSDAGKSWKRDNQVDKVGANIYKIKFFDKDTAFALGSNGLVLKYDARNTA 246          
BLAST of Ggra2464.t1 vs. uniprot
Match: A0A6T6B065 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6B065_9RHOD)

HSP 1 Score: 447 bits (1150), Expect = 5.480e-153
Identity = 217/361 (60.11%), Postives = 261/361 (72.30%), Query Frame = 0
Query:   51 RRSFLSAA-ALAALQLPA-AASKAERVLTPPAWTQVELDSGETIYDIDFSPVDPSHGFLVGSRGTVAETFDRGVTWQPRTFARLDADEELNYRFEVVTFRGQEGWVIGKPSLLLHTSDSGKSWERVPLSPKLPGEPVAITALGPQKAEMTTNAGAVYVTENSGRNWKAQVRETIDATLNRTISSGVTGASYFTGSIIQVLRDAYGAYLAISSRGNFFLTWKPGQDFWIPHARDSSRRIQSMGFVNNDVNDGVWMATRGGGLSFTEKNPELESTELLKFNKVDIRSGGYGILDVAFRPDTSEVWAAIGGGTLYRSEDGGRSWKRDDKTGKVGANIYRIKFFGKDTAFALGSNGVVLRYNPEA 409
            RR FL    A+    +PA AA+ A ++L  P W QV LD+  T++D+ FS  DP HG+LVG++G V ET D GVTW+PR F  LDA+EE NYRFE ++F G+E                     RV LSPKLPGEPV +TALGP +AEMTT AGAVY T N G NWKA V+ETIDATLNRT+SSGV+GASYFTGSII V+RD+ G Y+A+SSRGNFFLTW PGQDFWIPH RDSSRRIQ+MGFV NDV +G+WM+TRGGGL  T  +P+L+STE  +F KVDI+S GYGILDV FRP T + WA +GGG L+ S DGG+SW RD   GK GAN+Y+IKFF  D  F LG+ GV+LRY   +
Sbjct:   43 RREFLDGVTAMGLATVPAGAANAAPQILERPNWVQVPLDTDSTVFDLSFSEKDPKHGWLVGTKGLVMETTDGGVTWEPRAFQNLDAEEEFNYRFETISFFGEEXXXXXXXXXXXXXXXXXXXXTRVSLSPKLPGEPVLVTALGPDEAEMTTTAGAVYRTTNGGLNWKALVKETIDATLNRTVSSGVSGASYFTGSIISVIRDSIGVYIAVSSRGNFFLTWAPGQDFWIPHGRDSSRRIQAMGFVANDVKNGIWMSTRGGGLQLTRPDPDLQSTESFEFGKVDIKSAGYGILDVGFRPGTPDAWATLGGGNLFYSPDGGKSWARDKTVGKPGANLYKIKFFSSDIGFILGAGGVLLRYTGSS 403          
BLAST of Ggra2464.t1 vs. uniprot
Match: A0A7S3EIV7 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EIV7_9RHOD)

HSP 1 Score: 427 bits (1099), Expect = 2.590e-145
Identity = 214/371 (57.68%), Postives = 267/371 (71.97%), Query Frame = 0
Query:   44 DSSFKLHRRSFLSAAAL-------AALQLPAAASKAERVLTPPA-WTQVELDSGETIYDIDFSPVDPSHGFLVGSRGTVAETFDRGVTWQPRTFARLDADEELNYRFEVVTFRGQEGWVIGKPSLLLHTSDSGKSWERVPLSPKLPGEPVAITALGPQKAEMTTNAGAVYVTENSGRNWKAQVRETIDATLNRTISSGVTGASYFTGSIIQVLRDAYGAYLAISSRGNFFLTWKPGQDFWIPHARDSSRRIQSMGFVNNDVNDGVWMATRGGGLSFTEKNPELESTELLKFNKVDIRSGGYGILDVAFRPDTSEVWAAIGGGTLYRSEDGGRSWKRDDKTGKVGANIYRIKFFGKDTAFALGSNGVVLRYN 406
            D+S  L RR  L +AA        A   LP +A  A+    P   W++V L    T++D+ F P +PSHG+L+G++G+V ET D G TW PR+F  LD +EE+NYRF+ ++F G                      ERV LSPKLPG+P +ITALG + AEMTT AGAVYVT NSG NWKAQV+ETIDATLNRT+SSGVTGASYFTGSII VLRD+ GAY+A+SSRGNF+LTWKPGQ+FW+PH RDSS+RIQ MGFVN+DVN G+WM+ RGG L F+E NP++   EL  F KV+++SGGYGILDVAFRP T EVWA++GGG L+ S DGG++W  D + GKVGA +Y+I F  KD  FALG+NGV+LRY+
Sbjct:   28 DASVALSRRELLKSAAAGIAAAVAAGSALPDSAIAADVSSIPKGKWSRVNLPFEGTLFDLSFIPQEPSHGWLIGTKGSVFETIDYGQTWMPRSFQNLDPEEEINYRFQEISFNGSXXXXXXXXXXXXXXXXXXXXXERVSLSPKLPGDPCSITALGRESAEMTTTAGAVYVTTNSGLNWKAQVKETIDATLNRTVSSGVTGASYFTGSIISVLRDSLGAYIAVSSRGNFYLTWKPGQEFWVPHGRDSSKRIQGMGFVNDDVNKGIWMSLRGGDLVFSEPNPDILKGEL-DFKKVNLKSGGYGILDVAFRPGTDEVWASVGGGQLFVSYDGGKTWSFDKQLGKVGALLYKIIFVSKDVGFALGANGVLLRYS 397          
BLAST of Ggra2464.t1 vs. uniprot
Match: A0A5J4Z176 (Photosystem II stability/assembly factor n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z176_PORPP)

HSP 1 Score: 418 bits (1074), Expect = 2.740e-141
Identity = 209/360 (58.06%), Postives = 264/360 (73.33%), Query Frame = 0
Query:   51 RRSFLSAAALAALQLPAAASKAER-----VLTPPAWTQVELDSGETIYDIDFSPVDPSHGFLVGSRGTVAETFDRGVTWQPRTFARLDADEELNYRFEVVTFRGQEGWVIGKPSLLLHTSDSGKSWERVPLSPKLPGEPVAITALGPQKAEMTTNAGAVYVTENSGRNWKAQVRETIDATLNRTISSGVTGASYFTGSIIQVLRDAYGAYLAISSRGNFFLTWKPGQDFWIPHARDSSRRIQSMGFVNNDVNDGVWMATRGGGLSFTEKNPELESTELLKFNKVDIRSGGYGILDVAFRPDTSEVWAAIGGGTLYRSEDGGRSWKRDDKTGKVGANIYRIKFFGKDTAFALGSNGVVLRY 405
            RR+ L++A  A+L   AA SK+E      V     W +V+L S  T++D+DF     + G+LVGSRG++AE+ D G TWQ R+F  LD +EE+NYRF+ V+F G E                    ERVPLSPKLPG+PV ITAL P  AE+ T AGAVY T N GRNWKAQV+ETIDATLNRT+SSGV+GASYFTGSI+ VLRD  G+YLAISSRGNF+LTW+ GQDFWIPHARDSSRRIQ+MGF++N+++ G+WMATRGGGL FT+   +L +T  L F+ + I++GGY IL+VAFRPDT +VWA++GGGTL+ S+D G++WKRDD  GK G  +Y IKFFGKD  F LG NG++LR+
Sbjct:   56 RRNVLTSAMYASLM--AAISKSEGAEAADVAVSKNWEKVDLPSDATVFDLDFVK-GSNRGWLVGSRGSIAESSDGGKTWQARSFQNLDPEEEINYRFQKVSFVGDEXXXXXXXXXXXXXXXXXXXXERVPLSPKLPGDPVIITALSPNTAELCTTAGAVYTTTNGGRNWKAQVKETIDATLNRTVSSGVSGASYFTGSIVSVLRDVTGSYLAISSRGNFYLTWEKGQDFWIPHARDSSRRIQAMGFIDNELSKGLWMATRGGGLGFTKPGVDLLTTSALDFDDIKIKTGGYAILNVAFRPDTEDVWASVGGGTLWFSKDHGKTWKRDDLVGKTGGILYDIKFFGKDKGFVLGGNGLLLRF 412          
BLAST of Ggra2464.t1 vs. uniprot
Match: A0A7S2SCF7 (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCF7_9STRA)

HSP 1 Score: 417 bits (1071), Expect = 5.020e-141
Identity = 215/405 (53.09%), Postives = 290/405 (71.60%), Query Frame = 0
Query:    9 ASAPLRVTTFTPRSHATARRRDAARTQMSFSVDQPDSSFKLHRRSFL--SAAALAALQLPAA----ASKAERVLTPPAWTQVELDSGETIYDIDFSPVDPSHGFLVGSRGTVAETFDRGVTWQPRTFARLDADEELNYRFEVVTFRGQEGWVIGKPSLLLHTSDSGKSWERVPLSPKLPGEPVAITALGPQKAEMTTNAGAVYVTENSGRNWKAQVRETIDATLNRTISSGVTGASYFTGSIIQVLRDAYGAYLAISSRGNFFLTWKPGQDFWIPHARDSSRRIQSMGFVNNDVNDGVWMATRGGGLSFTEKNPELESTELLKFNKVDIRSGGYGILDVAFRPDTSEVWAAIGGGTLYRSEDGGRSWKRDDKTGKVGANIYRIKFFGK--DTAFALGSNGVVLRY 405
            +SA L +      +   A  R    T +  + D  +      RR+F+  +A+A AAL + +     A+ AE   +   WT+ ++   ET+YDIDF    P+HG++VG+RG++AET D G+TW+PR+F+ LDA+EE+ YRF+VV+F+  EGWV+GKP+LLLHT DSGKSWER+PLSPKLPGEP +I ALGP KAEMTT++GAVYVT+N+GRNWKAQV+ETIDATLNR  SSGV+GASYFTGSII  +RD  GAYLA+SSRGNFFLTW+PGQDFWIPH R +SRRIQ+MGFV  D++ G+WM   GG +  + K+P+L S +  +F + DI++GGYG+ DVA+R + +E WA  G  T+Y S DGG+ +  D        N+Y ++FF +  +  +ALGSNG++LRY
Sbjct:    6 SSAALLLAASATNAFVPASCRSKTCTNLFMAADGVED-----RRAFVGKTASATAALSIASVTGGVAAPAEAAASK-MWTKSKVPFEETVYDIDFD--SPTHGYVVGARGSLAETNDGGLTWEPRSFSNLDAEEEITYRFQVVSFKDGEGWVLGKPALLLHTKDSGKSWERIPLSPKLPGEPSSILALGPSKAEMTTSSGAVYVTDNAGRNWKAQVKETIDATLNRISSSGVSGASYFTGSIINQVRDDDGAYLAVSSRGNFFLTWEPGQDFWIPHNRGTSRRIQNMGFVEGDIHKGLWMTLNGGKVFVSPKDPDL-SQDAFEFFEADIKTGGYGVTDVAWRNE-NEAWAVGGSNTMYVSMDGGKKFNFDKSANNFPGNLYSVRFFKEYNNMGWALGSNGMLLRY 400          
BLAST of Ggra2464.t1 vs. uniprot
Match: A0A7S3PV43 (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PV43_9STRA)

HSP 1 Score: 417 bits (1071), Expect = 5.750e-141
Identity = 219/415 (52.77%), Postives = 285/415 (68.67%), Query Frame = 0
Query:    5 LFFIASAPLRVTTFTPRSHATARRRDAARTQMSFSVDQPDSSFKLHRRSFLS-------AAALAALQLPAAASKAERVLTPPAWTQVELDSGETIYDIDFSPVDPSHGFLVGSRGTVAETFDRGVTWQPRTFARLDADEELNYRFEVVTFRGQEGWVIGKPSLLLHTSDSGKSWERVPLSPKLPGEPVAITALGPQKAEMTTNAGAVYVTENSGRNWKAQVRETIDATLNRTISSGVTGASYFTGSIIQVLRDAYGAYLAISSRGNFFLTWKPGQDFWIPHARDSSRRIQSMGFVNNDVNDGVWMATRGGGLSFTEKNPELESTELLKFNKVDIRSGGYGILDVAFRPDTSEVWAAIGGGTLYRSEDGGRSWKRDDKTGKVGANIYRIKFFGKD---TAFALGSNGVVLRYNPEA 409
            LF  A   L  T     + A  +      T MS + D  +      RR+F+S       AA+LA +      + AE   +   W++V +   +T+YDIDF    P+HG+LVG+RG+ AET D G TW+PR+F+ LDA+EE+ YRF+VV+F G EGWV+GKP+LLLHT D+GKSWER+PLSPKLPGEP ++ ALGP KAEMTT++GAVY+TEN+GRNWKAQV+ETIDATLNR  SSGV+GASYF+GSII   RDA GAY+A+SSRGNFFLTW+PGQDFWIPH R + RRIQ+MGFVN D++ G+WM   GG L    ++ +L S +   F + DI++GGYG+ DV +R D +EVWA  G  T+Y S DGG+ +  D     +  N+Y +KFF KD     +ALGSNG++LRY   A
Sbjct:    3 LFSAALVLLSATASMAFAPAATKTATNTATLMSATDDNCED-----RRAFVSKSVTAGAAASLATMGSAVNPAPAEAAASK-LWSRVAIPFEDTVYDIDFD--SPTHGYLVGARGSFAETNDGGKTWEPRSFSNLDAEEEITYRFQVVSFEGGEGWVLGKPTLLLHTKDAGKSWERIPLSPKLPGEPTSVLALGPSKAEMTTSSGAVYITENAGRNWKAQVQETIDATLNRISSSGVSGASYFSGSIINQHRDADGAYIAVSSRGNFFLTWEPGQDFWIPHNRGTPRRIQNMGFVNGDIHKGLWMTLNGGKLLINSQDVDL-SKDAFDFAEADIKTGGYGLTDVGYRTD-NEVWAVGGSNTMYVSFDGGKKFSFDKSANDIPGNLYNVKFF-KDYGNMGWALGSNGLLLRYTGSA 406          
BLAST of Ggra2464.t1 vs. uniprot
Match: A0A7S4WJL8 (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S4WJL8_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 1.040e-140
Identity = 219/421 (52.02%), Postives = 292/421 (69.36%), Query Frame = 0
Query:    1 MSPHLFFIASAPLRVTTFTPRSHATARRRDAARTQMSFSVDQPDSSFKLHRRSFLSAAALAALQLP--------------AAASKAERVLTPPAWTQVELDSGETIYDIDFSPVDPSHGFLVGSRGTVAETFDRGVTWQPRTFARLDADEELNYRFEVVTFRGQEGWVIGKPSLLLHTSDSGKSWERVPLSPKLPGEPVAITALGPQKAEMTTNAGAVYVTENSGRNWKAQVRETIDATLNRTISSGVTGASYFTGSIIQVLRDAYGAYLAISSRGNFFLTWKPGQDFWIPHARDSSRRIQSMGFVNNDVNDGVWMATRGGGLSFTEKNPELESTELLKFNKVDIRSGGYGILDVAFRPDTSEVWAAIGGGTLYRSEDGGRSWKRDDKTGKVGANIYRIKFFGK--DTAFALGSNGVVLRY 405
            +S  L+ +A+ P  V+ F   +    R+   A+T M  S ++P +     RR+F+S  + AAL                 AAASK         WTQV L   +T+YDIDF    P+HG+LVG+RG  AET D G TW+ R+F+ LDA+EE+ YRF+VV+F+  EGWV+GKP+L+LHT D+GK+WER+PLSPKLPGEP ++ ALGP KAEMTT++GAVYVT+N+GRNWKAQV+ETIDATLNR  SSGV+GASYFTGSII  +RD  GAYLA+SSRGNFFLTW+PGQDFWIPH R + RRIQ+MGFV  D++ G+WM   GG L  +  +P L S++  +FN+ +I++GGYGI DVA+R   +EVWA  G  T+Y S D G+++  D     +  N+Y +KFF +  +  +ALGS+G++LRY
Sbjct:   31 ISAALYLLAAVP--VSAFIAPN--ALRQGGVAKTAMMMSANEPGAE---DRRAFVSQTSTAALXXXXXXXXXXXXXXXXNAAASK--------MWTQVSLPFEDTLYDIDFD--SPTHGYLVGARGAFAETNDGGQTWEARSFSNLDAEEEVTYRFQVVSFKDGEGWVLGKPTLMLHTKDAGKTWERIPLSPKLPGEPTSVLALGPSKAEMTTSSGAVYVTDNAGRNWKAQVKETIDATLNRISSSGVSGASYFTGSIINQVRDDDGAYLAVSSRGNFFLTWEPGQDFWIPHNRGTPRRIQNMGFVEGDIHKGLWMTLNGGKLFVSPTDPNL-SSDSFEFNEANIKTGGYGITDVAWRT-ANEVWAVGGSNTMYVSTDNGKNFSFDKSANSIPGNLYNVKFFKEYDNMGWALGSSGLLLRY 432          
BLAST of Ggra2464.t1 vs. uniprot
Match: A0A836CNS8 (Photosynthesis system II assembly factor YCF48-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNS8_9STRA)

HSP 1 Score: 414 bits (1065), Expect = 7.490e-140
Identity = 207/354 (58.47%), Postives = 250/354 (70.62%), Query Frame = 0
Query:   58 AALAALQLPAAASKAERVLTPPAWTQVELDSGETIYDIDFSPVDPSHGFLVGSRGTVAETFDRGVTWQPRTFARLDADEELNYRFEVVTFRGQEGWVIGKPSLLLHTSDSGKSWERVPLSPKLPGEPVAITALGPQKAEMTTNAGAVYVTENSGRNWKAQVRETIDATLNRTISSGVTGASYFTGSIIQVLRDAYGAYLAISSRGNFFLTWKPGQDFWIPHARDSSRRIQSMGFVNNDVNDGVWMATRGGGLSFTEKNPELESTELLKFNKVDIRSGGYGILDVAFRPDTSEVWAAIGGGTLYRSEDGGRSWKRDDKTGKVGANIYRIKFFGKDTAFALGSNGVVLRYNPEATA 411
            A LA +  P+AA  A   +   AW Q+ L    T+YDI F   D  HGF+VG++GT  ET D G TW PRTF  LDA+EE+NYRFE V+F   E ++IGKP +LLHT D G+SWERVPLSPKLPGEP  I ALG  KAEMTT+ GAVY T N+G NWKAQV+ETIDATLNR  SSGV+GASYFTGSII  LRD  GAYLA+SSRGNF+LTW+PGQDFWIPH R +SRRIQ+MGFV  D+N GVWM   GG +  ++    L       F  VDI++GGYGI+D A++ D  E WA  GGG L+ S DGG+++K D    K+  N+Y IKFF  ++ F LGS+GV+LRY   ATA
Sbjct:   70 AGLAGVTAPSAAEAAP--VKVKAWEQIALPVATTLYDIAFDTADTQHGFVVGAKGTFLETRDGGKTWDPRTFGNLDAEEEINYRFEKVSFVDGEAFIIGKPPILLHTKDKGESWERVPLSPKLPGEPSNIVALGSGKAEMTTSTGAVYYTNNAGLNWKAQVKETIDATLNRISSSGVSGASYFTGSIIGTLRDKSGAYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVEGDINKGVWMTLNGGVMQISKSGDSLSVATDPTFEPVDIKTGGYGIIDAAWK-DAKEAWAVGGGGNLWVSMDGGKTYKYDKVADKIPGNLYTIKFFSPESGFVLGSDGVLLRYLAGATA 420          
The following BLAST results are available for this feature:
BLAST of Ggra2464.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IY927.990e-24882.04PSII_BNR domain-containing protein n=1 Tax=Gracila... [more]
A0A1X6P5U58.850e-16365.98PSII_BNR domain-containing protein n=1 Tax=Porphyr... [more]
R7Q7141.890e-15486.53Photosystem II stability/assembly factor HCF136 (F... [more]
A0A6T6B0655.480e-15360.11Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S3EIV72.590e-14557.68Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z1762.740e-14158.06Photosystem II stability/assembly factor n=1 Tax=P... [more]
A0A7S2SCF75.020e-14153.09Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S3PV435.750e-14152.77Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4WJL81.040e-14052.02Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID... [more]
A0A836CNS87.490e-14058.47Photosynthesis system II assembly factor YCF48-dom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 66..217
e-value: 1.8E-11
score: 45.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 251..411
e-value: 7.8E-6
score: 26.9
IPR028203Photosynthesis system II assembly factor Ycf48/Hcf136-like domainPFAMPF14870PSII_BNRcoord: 80..405
e-value: 9.5E-119
score: 396.2
NoneNo IPR availablePANTHERPTHR47199PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTICcoord: 44..406
NoneNo IPR availableSUPERFAMILY110296Oligoxyloglucan reducing end-specific cellobiohydrolasecoord: 81..405

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:397101..398336 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2464.t1Ggra2464.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 397101..398336 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2464.t1 ID=Ggra2464.t1|Name=Ggra2464.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=412bp
MSPHLFFIASAPLRVTTFTPRSHATARRRDAARTQMSFSVDQPDSSFKLH
RRSFLSAAALAALQLPAAASKAERVLTPPAWTQVELDSGETIYDIDFSPV
DPSHGFLVGSRGTVAETFDRGVTWQPRTFARLDADEELNYRFEVVTFRGQ
EGWVIGKPSLLLHTSDSGKSWERVPLSPKLPGEPVAITALGPQKAEMTTN
AGAVYVTENSGRNWKAQVRETIDATLNRTISSGVTGASYFTGSIIQVLRD
AYGAYLAISSRGNFFLTWKPGQDFWIPHARDSSRRIQSMGFVNNDVNDGV
WMATRGGGLSFTEKNPELESTELLKFNKVDIRSGGYGILDVAFRPDTSEV
WAAIGGGTLYRSEDGGRSWKRDDKTGKVGANIYRIKFFGKDTAFALGSNG
VVLRYNPEATA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR028203PSII_CF48-like_dom