Ggra24.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra24.t1
Unique NameGgra24.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length434
Homology
BLAST of Ggra24.t1 vs. uniprot
Match: A0A2V3J0S4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0S4_9FLOR)

HSP 1 Score: 326 bits (835), Expect = 3.880e-105
Identity = 173/284 (60.92%), Postives = 200/284 (70.42%), Query Frame = 0
Query:  178 MDDENSPPLRPPARPQSPLLLPSERVPLAPPHIDHNASTPSAYESPTPPTSPSTDYPYGAVARVVPPSP----------------------------DADGYRERPQRESIQRRRQRIADTTILGIAIFVVTGVVFLVMATGFTAMVTNENSPRLQIFSAWPDGGVIPLEYGCHASDGVPISIPLRWEDVPPSATNLVILFSHPGALNESKVDPVHWFVTNIPLGPDHDNHMPPNASTNPALLPHGAVERANVYSHGGYYWPPCSKTTSLFTIHVYAVEAPAVI 433
            M DE + PLRP   P+SPLL PSER+PLAP H DHNASTPSAYESP+PPTSPST+YPYGAVARVVP S                              AD Y +  + E I R RQR+ DT ILG  I  +T +V ++MA+G   MV N NS +L+IFS WPDGGVIPL+YGCHA    PISIPLRWE+VP SATNL++LFSHPGAL++S VDPVHWFVTNI L     + M PNAS N AL+P GAV+RAN +SH GYYWPPCS TTS+FT+H YAVEAPAVI
Sbjct:    1 MADEQTVPLRP--VPRSPLLSPSERIPLAPAHTDHNASTPSAYESPSPPTSPSTEYPYGAVARVVPDSYVTQNRRLNGLADPQQTVHLITDSSASEYSADRYVDHTRLE-ISRLRQRLMDTYILGAVIVAITTIVSVIMASGLATMVANRNSAKLEIFSDWPDGGVIPLKYGCHAHGHHPISIPLRWENVPASATNLIVLFSHPGALHDSTVDPVHWFVTNIRLDEAAPSFMAPNASVNAALMPGGAVQRANAFSHQGYYWPPCSNTTSVFTVHAYAVEAPAVI 281          
BLAST of Ggra24.t1 vs. uniprot
Match: A0A2V3J0R0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0R0_9FLOR)

HSP 1 Score: 222 bits (565), Expect = 2.880e-66
Identity = 119/169 (70.41%), Postives = 130/169 (76.92%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVILAKRLFWTEEVEYLYLCIATAASTFALYAACAPRAAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVFCDMATATFGGVVRDMLCSRKVRIMHSAAEIYATTAAAGAATYVAXXXXXASVPARVGAGVGVAVALRTWAWLEGVWL 169
            +VGTITAVGGGTIRDAVILAKR FWTEEVEYLYLC+ TAA+TF LY+   P   REESA+EF +DT+GV AFCVIGA+NGVRARVP  V   C  ATATFGGVVRD+L  R+VRI+HS AEIYATTA AGAA YV        V ARV AG   A ALRTWAWL GV L
Sbjct:   88 LVGTITAVGGGTIRDAVILAKRPFWTEEVEYLYLCLLTAATTFVLYSRNPPDQQREESALEFASDTVGVAAFCVIGAINGVRARVPALVTTLCGTATATFGGVVRDLLVGREVRILHSRAEIYATTAGAGAAMYVVTRAAGGGVLARVAAGTATAAALRTWAWLHGVRL 256          
BLAST of Ggra24.t1 vs. uniprot
Match: R7Q6F2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6F2_CHOCR)

HSP 1 Score: 209 bits (533), Expect = 1.130e-59
Identity = 91/171 (53.22%), Postives = 130/171 (76.02%), Query Frame = 0
Query:  264 RQRIADTTILGIAIFVVTGVVFLVMATGFTAMVTNENSPRLQIFSAWPDGGVIPLEYGCHASDGVPISIPLRWEDVPPSATNLVILFSHPGALNESKVDPVHWFVTNIPLGPDHDNHMPPNASTNPALLPHGAVERANVYSHGGYYWPPC-SKTTSLFTIHVYAVEAPAVI 433
            R+ + D  ILG ++ V+T +VF+++ +G T ++ N N P+L++FS WP+GG+IPL+YGCHA DG P+SIPLRW +VP +ATNLV+LF++PGA+++ ++DPVHWF+T+IPL  D D  +P NAS NP L+P  + +RAN  S  G YWPPC +  TS F +H+YA+EAP VI
Sbjct:  153 REGMKDRYILGCSVLVMTAIVFVIIVSGMTTILANRNYPQLEVFSDWPNGGLIPLKYGCHAPDGHPVSIPLRWRNVPRAATNLVVLFANPGAISKRRMDPVHWFITDIPLEDDKDGSIPANASLNPELMPPNSKQRANAGSSKGVYWPPCVTNGTSFFIVHIYAIEAPPVI 323          
BLAST of Ggra24.t1 vs. uniprot
Match: R7Q7M5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7M5_CHOCR)

HSP 1 Score: 186 bits (473), Expect = 1.110e-52
Identity = 107/179 (59.78%), Postives = 125/179 (69.83%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVILAKRLFWTEEVEYLYLCIATAASTFALYAACAPRAAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVFCDMATATFGGVVRDMLCSRKVRIMHSAAEIYATTAAAGAATYVAXXXXXASVPARVGAGVGVAVALRTWAWLEG----VWLASSSSA 175
            +VGTITAVGGGTIRDAVIL  R FWTEE EYLYLC+  +  TFA++    PR   + SA+ FV D+ GV AF VIGA NGVRA VP  V V C MATATFGG VRD+LC+RKVRI+HS AE+YATTAA GA +Y+      A V ARVG G+ VA A R +AW  G    VW + S +A
Sbjct:   92 VVGTITAVGGGTIRDAVILNARPFWTEEPEYLYLCLLASGLTFAMW----PREKEDNSALHFVTDSAGVAAFAVIGAQNGVRAGVPAIVSVVCGMATATFGGAVRDVLCNRKVRILHSHAEVYATTAAMGAISYLGMRRMGAGVRARVGTGLVVAFAGRCFAWRYGTRLPVWQSRSETA 266          
BLAST of Ggra24.t1 vs. uniprot
Match: A0A7S0IDQ1 (Hypothetical protein n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0IDQ1_MICPS)

HSP 1 Score: 164 bits (414), Expect = 1.320e-42
Identity = 95/178 (53.37%), Postives = 119/178 (66.85%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVI-LAKRLFWTEEVEYLYLCIATAASTFALYAACAPRAAREESAVEFV--ADTIGVGAFCVIGAMNGVRARVPIAVVVFCDMATATFGGVVRDMLCSRKVRIMHSAAEIYATTAAAGAATYVAXXXXXASVPARVGAGVGVAVALRTWAWLEGVWLASSSSA 175
            +VGTITAVGGGT+RD ++   +R FW EE+EYL++C+ T  +TF  +     RA   +   E+V  AD IGVGAFCVIGAMNG+RA VP A  V C M TATFGGV+RD+L SR VRI+HS  +IYATTA  GA TY+      A V AR+ AG G A+ALR  AW   + L + + A
Sbjct:  166 IVGTITAVGGGTVRDLLLGRGRRAFWMEEIEYLWICVGTGVATFLAWPHL-ERACGVKDTDEWVDWADAIGVGAFCVIGAMNGIRAGVPCAAAVACGMFTATFGGVIRDVLMSRPVRILHSYTDIYATTALTGATTYMLVRAAGAPVSARILAGAGTAIALRKLAWSNDLRLPTYAGA 342          
BLAST of Ggra24.t1 vs. uniprot
Match: A0A836CDZ5 (UPF0126 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ5_9STRA)

HSP 1 Score: 160 bits (404), Expect = 3.490e-42
Identity = 87/163 (53.37%), Postives = 108/163 (66.26%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVILAKRLFWTEEVEYLYLCIATAASTFALYAACAPRAAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVFCDMATATFGGVVRDMLCSRKVRIMHSAAEIYATTAAAGAATYVAXXXXXASVPARVGAGVGVAVALRTWAW 163
            +VGTITAVGGGT+RD ++    +FW  E EYLY+C+A A  TF  Y+A A +    +S +   AD +GVGAFCVIGA N VR R+  A+ V C M TATFGGV+RD+LC R  RI+HS AEIYA+TA  GA TY+A     A+   R+  G G A ALR  AW
Sbjct:   68 IVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYSALAEQGFTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRARATPMLRIAGGFGAAFALRIAAW 230          
BLAST of Ggra24.t1 vs. uniprot
Match: A0A7S1TDV4 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDV4_9RHOD)

HSP 1 Score: 148 bits (374), Expect = 1.310e-38
Identity = 84/180 (46.67%), Postives = 113/180 (62.78%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVILAKRLFWTEEVEYLYLCIATAASTFALYAACAPRAAREESA------VEFVADTIGVGAFCVIGAMNGVRARVPIAVVVFCDMATATFGGVVRDMLCSRKVRIMHSAAEIYATTAAAGAATYVAXXXXXASVPARVGAGVGVAVALRTWAWLEGVWLASSSS 174
            +VG ITAVGGGT+RD  +  + +FW  E EYL LC+ T+  T AL+    P   R+ ++      VE  +D  G+ AFCVIGA NG+R  VP  + V C M TATFGGV+RD+LC R  RI+HS AE+YA+ AA GAA+YV       ++PAR+G GVG A+  R  A+   + L + +S
Sbjct:   51 VVGAITAVGGGTVRDLFLGNRPVFWMVETEYLILCLITSGLTLALW----PVLTRDSNSSSTFKKVELYSDAAGLSAFCVIGAQNGIRLGVPPIISVVCGMMTATFGGVIRDVLCQRPARILHSHAEVYASCAAVGAASYVLAARMMMAMPARIGVGVGAALTARIAAFTYDIRLPTMTS 226          
BLAST of Ggra24.t1 vs. uniprot
Match: A0A7S1XFC8 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFC8_9RHOD)

HSP 1 Score: 148 bits (374), Expect = 1.350e-37
Identity = 84/180 (46.67%), Postives = 113/180 (62.78%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVILAKRLFWTEEVEYLYLCIATAASTFALYAACAPRAAREESA------VEFVADTIGVGAFCVIGAMNGVRARVPIAVVVFCDMATATFGGVVRDMLCSRKVRIMHSAAEIYATTAAAGAATYVAXXXXXASVPARVGAGVGVAVALRTWAWLEGVWLASSSS 174
            +VG ITAVGGGT+RD  +  + +FW  E EYL LC+ T+  T AL+    P   R+ ++      VE  +D  G+ AFCVIGA NG+R  VP  + V C M TATFGGV+RD+LC R  RI+HS AE+YA+ AA GAA+YV       ++PAR+G GVG A+  R  A+   + L + +S
Sbjct:  141 VVGAITAVGGGTVRDLFLGNRPVFWMVETEYLILCLITSGLTLALW----PVLTRDSNSSSTFKKVELYSDAAGLSAFCVIGAQNGIRLGVPPIISVVCGMMTATFGGVIRDVLCQRPARILHSHAEVYASCAAVGAASYVLAARMMMAMPARIGVGVGAALTARIAAFTYDIRLPTMTS 316          
BLAST of Ggra24.t1 vs. uniprot
Match: A0A830HNH6 (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HNH6_9CHLO)

HSP 1 Score: 145 bits (365), Expect = 1.510e-35
Identity = 87/181 (48.07%), Postives = 112/181 (61.88%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVILAKR-LFWTEEVEYLYLCIATAASTFALYAACAPRAAREE-----SAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVFCDMATATFGGVVRDMLCSRKVRIMHSAAEIYATTAAAGAATYVAXXXXXASVPARVGAGVGVAVALRTWAWLEGVWLASSSSA 175
            +VGTITAVGGGT+RD ++  +   FW  E EYLY+CIAT A+TF L+    P  ++ +      AV    D +G+GAFCVIGA NGVRA VP+     C MATATFGGV+RD LC R VRI+HS  E+YAT A  GA +Y+A           +  G+G A ALR  +   G+ L + SS+
Sbjct:  210 IVGTITAVGGGTVRDFLLGVRGPCFWMAEAEYLYMCIATTAATFFLW----PNISQSQMNPTAEAVIETGDFLGLGAFCVIGAHNGVRAGVPLVAAAICGMATATFGGVIRDTLCKRPVRILHSHQELYATCALVGATSYLASRGAGLPTALNIFVGMGAAFALRYASMNYGLRLPTLSSS 386          
BLAST of Ggra24.t1 vs. uniprot
Match: D8LE41 (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE41_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 1.380e-33
Identity = 81/180 (45.00%), Postives = 108/180 (60.00%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVILAKRLFWTEEVEYLYLCIATAASTFALYAACAPRAAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVFCDMATATFGGVVRDMLCSRKVRIMHSAAEIYATTAAAGAATYVAXXXXXASVPARVGAGVGVAVALRTWAWLEGV----WLASSSSAV 176
            +VGTITA GGGT+RD ++    +FW  E EYL++C+AT    F L++  A R  R++ A+    D +GVGAFC IGA  GVR  +   V V C M T+TFGGV+RD+LCSR  RI+ S  EIYA+TA  G+A Y+A          R+ +G   AVALR  A+   +    W   S +AV
Sbjct:  116 IVGTITATGGGTVRDVLLGNTPVFWMHETEYLWMCLATTVGIFFLWSYLAERGVRDDMALLNWVDAMGVGAFCCIGAQAGVRKGLSNVVCVACGMLTSTFGGVIRDVLCSRPPRILFSHCEIYASTAVLGSAVYIATKAAGLPPVVRIMSGFLSAVALRVLAFTTDIRLPTWTQPSGAAV 295          
The following BLAST results are available for this feature:
BLAST of Ggra24.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0S43.880e-10560.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J0R02.880e-6670.41Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q6F21.130e-5953.22Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q7M51.110e-5259.78Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0IDQ11.320e-4253.37Hypothetical protein n=2 Tax=Micromonas TaxID=3883... [more]
A0A836CDZ53.490e-4253.37UPF0126 domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S1TDV41.310e-3846.67Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1XFC81.350e-3746.67Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A830HNH61.510e-3548.07Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
D8LE411.380e-3345.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008914Phosphatidylethanolamine-binding proteinPFAMPF01161PBPcoord: 320..427
e-value: 4.0E-5
score: 23.9
IPR036610PEBP-like superfamilyGENE3D3.90.280.10coord: 307..432
e-value: 2.9E-15
score: 58.4
IPR036610PEBP-like superfamilySUPERFAMILY49777PEBP-likecoord: 308..429
IPR005115Glycine transporterPFAMPF03458Gly_transportercoord: 63..137
e-value: 2.0E-15
score: 56.4
coord: 1..46
e-value: 3.8E-8
score: 33.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..239
NoneNo IPR availablePANTHERPTHR30506INNER MEMBRANE PROTEINcoord: 1..163
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..271
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 297..433
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 272..296
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..86
NoneNo IPR availableTMHMMTMhelixcoord: 29..51
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 85..104
NoneNo IPR availableTMHMMTMhelixcoord: 272..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000949_piloncontigtig00000949_pilon:16433..17998 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra24.t1Ggra24.t1Gracilaria gracilis GNS1m malemRNAtig00000949_pilon 16433..17998 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra24.t1 ID=Ggra24.t1|Name=Ggra24.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=434bp
MVGTITAVGGGTIRDAVILAKRLFWTEEVEYLYLCIATAASTFALYAACA
PRAAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVFCDMATATF
GGVVRDMLCSRKVRIMHSAAEIYATTAAAGAATYVATAAGGASVPARVGA
GVGVAVALRTWAWLEGVWLASSSSAVAMDDENSPPLRPPARPQSPLLLPS
ERVPLAPPHIDHNASTPSAYESPTPPTSPSTDYPYGAVARVVPPSPDADG
YRERPQRESIQRRRQRIADTTILGIAIFVVTGVVFLVMATGFTAMVTNEN
SPRLQIFSAWPDGGVIPLEYGCHASDGVPISIPLRWEDVPPSATNLVILF
SHPGALNESKVDPVHWFVTNIPLGPDHDNHMPPNASTNPALLPHGAVERA
NVYSHGGYYWPPCSKTTSLFTIHVYAVEAPAVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008914PEBP
IPR036610PEBP-like_sf
IPR005115Gly_transporter