Ggra2390.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra2390.t1 vs. uniprot
Match: A0A2V3ISP7 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISP7_9FLOR) HSP 1 Score: 293 bits (750), Expect = 3.200e-98 Identity = 143/211 (67.77%), Postives = 173/211 (81.99%), Query Frame = 0
Query: 4 NVGRISLITGGCLLTGLLGNRLLLTPLDGLTATQSRADLLGVATSAMLILYGLARTEISEKRARVEMGGVDVSTGFDGLRGVSVERGSRALLDGVQGVRSVAVVVGGEGRYFMGKFRDEKPVLAVKKEGVISKALNSGNRAYLADMKVVPVRETEFGFLPKECQSVLVQPVNEDVCVIVAADRPRPFTGQDFGWTQAICDRIGASLMGHSK 214
N GR+SLITGGCLLTGLLGNRLLLTPLDGLTATQSRAD+LGV A L+LYGLAR E+SE+RA VEMGG+ V +GF+G ER ++A++DG++G +SVAV+V GEGR+F+G+F E P + +EG+++KA+ SG RAYLADMKVVPVRETEFGFLP++CQ VLVQP +EDVCVIV ADRPR TGQDFGW QAICDR+G L +K
Sbjct: 2 NFGRVSLITGGCLLTGLLGNRLLLTPLDGLTATQSRADILGVIAGATLVLYGLARAEVSERRASVEMGGIQVKSGFEGSNAEVAERCAQAVIDGIEGAKSVAVMVRGEGRFFLGQFSTEAPATHMVEEGIVAKAMGSGKRAYLADMKVVPVRETEFGFLPQKCQCVLVQPASEDVCVIVGADRPRALTGQDFGWVQAICDRMGGYLSKEAK 212
BLAST of Ggra2390.t1 vs. uniprot
Match: A0A7S2ZMS3 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZMS3_9RHOD) HSP 1 Score: 102 bits (255), Expect = 3.000e-23 Identity = 75/207 (36.23%), Postives = 113/207 (54.59%), Query Frame = 0
Query: 4 NVGRISLITGGCLLTGLLGNRLLLTPLDGLTATQSRADLLGVATSAMLILYGLARTEISEKRAR-VEMGGVDVS----TGFDGLRGVSVERGSRALLDGVQGVRSVAVVVGGEGRYFMGKFRDEKPVLAVKKEGVISKALNSGNRAYLADMKVVPVRETEFGFLPKECQSVLVQPVNEDVCVIVAADRPRPFTGQDFGWTQAICDRI 205
N GR+++ L NRL + + SRADL+ VA+ AML+LYG+A +I + V++ G +VS + DGL G + SR+++ + VRSV + GG+ G E PV V ++ KAL S + Y A ++++P R EF +LPKE Q+VL+QP++ +I+ AD+ RP DFGW QAI R+
Sbjct: 35 NAGRLAIGASVVSFASTLTNRLFAS--GEVVDAHSRADLMCVASGAMLLLYGIANVQIDPREEETVDLKGEEVSEIQKSDPDGLLGWA----SRSIIASIPNVRSVLIYEGGKTVLREG-IMGESPV--VVPGPILEKALTSEEKTYFARLEILPGR-FEFTYLPKETQAVLIQPLSPTSALILGADKVRPIASVDFGWIQAITQRV 231
BLAST of Ggra2390.t1 vs. uniprot
Match: A0A7S0G2H2 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G2H2_9RHOD) HSP 1 Score: 102 bits (253), Expect = 6.150e-23 Identity = 69/174 (39.66%), Postives = 102/174 (58.62%), Query Frame = 0
Query: 37 QSRADLLGVATSAMLILYGLARTEISEKRAR-VEMGGVDVS----TGFDGLRGVSVERGSRALLDGVQGVRSVAVVVGGEGRYFMGKFRDEKPVLAVKKEGVISKALNSGNRAYLADMKVVPVRETEFGFLPKECQSVLVQPVNEDVCVIVAADRPRPFTGQDFGWTQAICDRI 205
SRADL+ VA+ AML+LYG+A +I + + V++ G +VS + DGL G + SR+++D + VRSV + GG+ G E P AV ++ KAL S + Y A ++++P R EF +LPK Q+VL+QP++ +I+ AD+ RP DFGW QAI RI
Sbjct: 68 HSRADLVCVASGAMLLLYGIANVQIDPREEQTVDLEGEEVSEIQKSDPDGLLGWA----SRSIIDSIPNVRSVLIYEGGKTVLREGVM-GESP--AVVPGPILEKALTSEEKTYFARLEILPGR-FEFTYLPKGTQAVLIQPLSPTSALILGADKVRPIASVDFGWIQAISQRI 233
BLAST of Ggra2390.t1 vs. uniprot
Match: A0A1Z4RAJ3 (Uncharacterized protein n=1 Tax=Calothrix sp. NIES-4101 TaxID=2005461 RepID=A0A1Z4RAJ3_9CYAN) HSP 1 Score: 85.1 bits (209), Expect = 1.090e-16 Identity = 67/211 (31.75%), Postives = 107/211 (50.71%), Query Frame = 0
Query: 7 RISLITGGCLLTGLLGNRLLLTPLDGLTATQSRADLLGVATSAMLILYGL----ARTEISEKRARVEMGGVDVSTGFDGLRGVSVERGSRALLDGVQGVRSVAVVVGGEGRYFMGKFRDEKPVLAVKKE----GVISKALNSGNRAYLADMKVVPVRETEFGFLPKECQSVLVQPVNEDVCVIVAADRPRPFTGQDFGWTQAICDRIGASL 209
R+ L+TGG L NR+L TP LT +QSRAD+LGV SA+LIL GL R++I + + G ++++ + SR LL + V V+V + GK + +LA K + ++++ + YL D+K P + EF +LP+ Q ++ QP+ + +I+ A+ PR +T QD W I D++ SL
Sbjct: 12 RLPLVTGGLGAVLLFINRIL-TP--ELTNSQSRADVLGVILSALLILTGLLWQQVRSQIPDAVQLIGEEGFELTSDLPDAVKTELAWASRLLL--LNTVTKAIVIV------YQGKVILRRGILAKKSQVTPGAILNRVIEKQKPVYLVDVKAYPGK-IEFDYLPENTQGIICQPLGAEGAMILGANAPRSYTKQDENWIAGIADKLTVSL 210
BLAST of Ggra2390.t1 vs. uniprot
Match: A0A8J7AU06 (Cofactor assembly of complex C subunit B n=2 Tax=Romeria TaxID=945765 RepID=A0A8J7AU06_9CYAN) HSP 1 Score: 79.3 bits (194), Expect = 1.770e-14 Identity = 67/207 (32.37%), Postives = 99/207 (47.83%), Query Frame = 0
Query: 16 LLTGLLGNRLLL-----TPLDGLTATQSRADLLGVATSAMLILYGLARTEISEKRAR-VEMGG---VDVSTGFDGLRGVSVERGSRALLDGVQGVRSVAVVVGGEGRYFMGKFRDEKPVLA----VKKEGVISKALNSGNRAYLADMKVVPVRETEFGFLPKECQSVLVQPVNEDVCVIVAADRPRPFTGQDFGWTQAICDRIGASL 209
L G LG LLL TP LTA+Q+RAD LGV SA+LIL GL ++ + V++ G D++ + S LL RS+ V Y+ G+ + VL VK ++ + L YL ++ + P R EF +LP+ Q V+ QP+ + +I+ A+ PR +T QD W I ++IG SL
Sbjct: 15 LFVGALGGVLLLVNRLATP--ALTASQARADALGVILSALLILIGLLWQQVQPRSPETVQLAGQEGFDLNPDLPAALKTELAWASSLLLTNTV-TRSIVV-------YYRGQVLLRRGVLGSNSQVKPGPILQRVLEKKRPVYLVNLSIYPGR-VEFDYLPENTQGVICQPLGQQGALILGANAPRSYTQQDEAWIAGISEKIGDSL 210
BLAST of Ggra2390.t1 vs. uniprot
Match: A0A1Q4S0Z5 (Uncharacterized protein n=8 Tax=Cyanobacteria TaxID=1117 RepID=A0A1Q4S0Z5_9CYAN) HSP 1 Score: 78.2 bits (191), Expect = 3.710e-14 Identity = 66/209 (31.58%), Postives = 101/209 (48.33%), Query Frame = 0
Query: 16 LLTGLLGNRLLL-----TPLDGLTATQSRADLLGVATSAMLILYGLARTEISEKRA-RVEM---GGVDVSTGFDGLRGVSVERGSRALLDGVQGVRSVAVVVGGEGRYFMGKFRDEKPVLAVKKE----GVISKALNSGNRAYLADMKVVPVRETEFGFLPKECQSVLVQPVNEDVCVIVAADRPRPFTGQDFGWTQAICDRIGASLMG 211
L+ G+LG LL TP LT +QSRAD+LGV SA+L+L G+ ++ + VE+ G ++ T + SR LL RS+ VV + GK + +L K E ++++ L YL D+K P + EF +LP+ Q ++ QP+ +I+ A+ PR +T QD W I D++ SL G
Sbjct: 14 LVVGMLGAVLLFINRIFTP--ELTNSQSRADVLGVILSALLVLTGMLWQQVQARTPDAVELIGEEGFEIVTDLPDTVKNELAWASRLLLLNTV-TRSIVVV-------YKGKVLLRRGILGQKSEVKPGAILNRVLEKQKPIYLVDVKAYPGK-IEFDYLPENTQGIICQPIGSQGAMILGANAPRSYTQQDENWIAGIADKLAVSLEG 211
BLAST of Ggra2390.t1 vs. uniprot
Match: A0A2A2TA54 (Uncharacterized protein n=1 Tax=Calothrix elsteri CCALA 953 TaxID=987040 RepID=A0A2A2TA54_9CYAN) HSP 1 Score: 77.8 bits (190), Expect = 6.080e-14 Identity = 61/187 (32.62%), Postives = 93/187 (49.73%), Query Frame = 0
Query: 33 LTATQSRADLLGVATSAMLILYGL------ARTEISEKRARVEMGGVDVSTGFDGLRGVSVERGSRALLDGVQGVRSVAVVVGGEGRYFMGKFRDEKPVLAVKKE----GVISKALNSGNRAYLADMKVVPVRETEFGFLPKECQSVLVQPVNEDVCVIVAADRPRPFTGQDFGWTQAICDRIGASL 209
LT +QSRAD+LGV SA+LIL G+ +RT S K E G +++ + + SR LL RS+ VV + GK + +LA K E ++++ L YL D+K P + EF +LP+ Q ++ QP+ + +I+ A+ PR +T QD W I D++ SL
Sbjct: 35 LTNSQSRADVLGVILSALLILTGMLWQQVQSRTPDSVKLVGEE--GFEIAPELPEVVKTELAWASRLLLLNTA-TRSLVVV-------YQGKVILRRGILAQKSEVTPGAILNRVLEKQKPVYLVDVKAYPGK-IEFDYLPENTQGIICQPLATEGAMILGANAPRSYTKQDENWIAGIADKLTVSL 210
BLAST of Ggra2390.t1 vs. uniprot
Match: A0A8J4B1W8 (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B1W8_9CHLO) HSP 1 Score: 77.0 bits (188), Expect = 3.630e-13 Identity = 62/211 (29.38%), Postives = 106/211 (50.24%), Query Frame = 0
Query: 8 ISLITGGCLLTGLLGNRLL--LTPLDGLTATQSRADLLGVATSAMLILYGLARTEISEKR-ARVEMGGVDVSTGFDGLRGVSV-----ERGSRALLDGVQGVRSVAVVVGGEGRYFMGKF-RDEKPVLAVKKEGVISKALNSGNRAYLADMKVVPVRETEFGFLPKECQSVLVQPVNEDVCVIVAADRPRPFTGQDFGWTQAICDRIGASL 209
+ L TGG + LL NR L + P+ +++QSRAD+LG+ SA+L+L GL + + A V++ G V+ GL+ + E ++ + +S+ ++ G + G R +KP A+ + + S+A+ G YLA++ + P R FLP+ Q V+VQPV + ++ D R F+ D W + D++ SL
Sbjct: 63 LPLYTGGMGVVSLLLNRTLSGIAPVVDASSSQSRADVLGIVLSAVLLLTGLQWLSLKPREVAAVDLDGPTVNYVDPGLKPHATLLREFEWARNSMFKATR-CKSLVLIYKGRTLFHYGYILRGQKPGEALPGD-ICSQAMKDGRGNYLANLVLYPGRPEFTSFLPENTQGVVVQPVGDQGVLVAGTDTVRGFSRLDQAWLATLADKLEVSL 271
BLAST of Ggra2390.t1 vs. uniprot
Match: A0A2J7ZTZ1 (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZTZ1_9CHLO) HSP 1 Score: 74.7 bits (182), Expect = 2.350e-12 Identity = 65/210 (30.95%), Postives = 103/210 (49.05%), Query Frame = 0
Query: 8 ISLITGGCLLTGLLGNRLL--LTPLDGLTATQSRADLLGVATSAMLILYGLARTEISEKR-ARVEMGG--VD-VSTGFDGLRGVSVERG-SRALLDGVQGVRSVAVVVGGEGRYFMGKF-RDEKPVLAVKKEGVISKALNSGNRAYLADMKVVPVRETEFGFLPKECQSVLVQPVNEDVCVIVAADRPRPFTGQDFGWTQAICDRIGASL 209
+ L GG + LL NR + P+ +++QSRAD+LG+ SA+L+L GL + ++ A VE G VD V +G + E G +R + RS+ ++ G + G R P A + + ++A+ G YLA++ + P R FLP+ Q V+VQPV D ++ D R F+ D W +I D++ SL
Sbjct: 64 LPLYAGGLGVVSLLLNRTFSGIAPVVDASSSQSRADVLGIVLSAVLLLTGLQWLALKQREVAAVEPDGPVVDYVDSGLKPQAALCREFGWARDSMFRTTRCRSLLLIYKGRNLFHFGHILRGLSPGSAAPGD-ICAQAMRDGRGNYLANLLLYPGRPEFTAFLPENTQGVMVQPVGSDGVLVAGTDMVRGFSRLDQAWLASIADKLEVSL 272
BLAST of Ggra2390.t1 vs. uniprot
Match: A0A7J7Q389 (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q389_9CHLO) HSP 1 Score: 74.7 bits (182), Expect = 3.360e-12 Identity = 63/216 (29.17%), Postives = 99/216 (45.83%), Query Frame = 0
Query: 5 VGRISLITGGCLLTGLLGNRLL--LTPLDGLTATQSRADLLGVATSAMLILYGLARTEISEKRA-RVEMGGVDVSTGFDGLR---GVSVE-RGSRALLDGVQGVRSVAVVVGGEGRYFMGKFRDEKPVLAVKKEGVISKALNSGNRAYLADMKVVPVRETEFGFLPKECQSVLVQPVNEDVCVIVAADRPRPFTGQDFGWTQAICDRIGASLMGHS 213
V + L GG GLL NR L + P+ ++QSRAD+LG+ SA+L+L GL + K V + GV V ++ +E R + L S+ V+ G + G R + V KA++S YLA++ + P RE +LP+ Q V+VQP+ D +++ D R + D W I D++ S G++
Sbjct: 49 VRSLPLWAGGVGFGGLLANRALSGIAPIVDAGSSQSRADVLGILLSAVLLLTGLQWLALKPKPIDAVALDGVSVDYLNPDIKLPKAAELELRWAWQALQATSRATSLVVIYQGRNLFHAGMARGGHQLGTAAAGEVARKAMDSSKGNYLANLVLYPGREEFVRYLPENTQGVVVQPLGGDGVLVIGTDTLRGLSRLDQAWIAIIADKLEVSFEGYT 264 The following BLAST results are available for this feature:
BLAST of Ggra2390.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra2390.t1 ID=Ggra2390.t1|Name=Ggra2390.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=221bpback to top |