Ggra2385.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2385.t1
Unique NameGgra2385.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length281
Homology
BLAST of Ggra2385.t1 vs. uniprot
Match: A0A2V3IJV4 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJV4_9FLOR)

HSP 1 Score: 313 bits (801), Expect = 8.200e-104
Identity = 179/292 (61.30%), Postives = 210/292 (71.92%), Query Frame = 0
Query:    1 MDLLDFSLAPNAVDDANQPSSSTQPAAMQNLLNANHNLPQQQLP--WAAAADIPFSTNPAQQPQASSAXXXXXXXSS-----SQPLAM-QKRPHSQPLRPASFALDEDPSIDPHVVNQMGGLAYADHCKERARERFKEMKKNEHMANGDFDRMKRRKKGDTSMTPRQKYLRRLRMNQDSAAAARHAQEVYVHVLEKLVKTSEGDKKALMTELHSLRQENFNLHNRVSELETVVGR---PVAEPSFLD-ATRRPYDPIQVAKLVDMLTAPQTVSAEAADPDFARECIQPARAV 280
            MDLLDF+L  N +DD        QP AM++LLN NH   QQ  P  W  AAD+P    P+    +SSA       +       QPL+  Q  P +  LRP     D+DP IDPHVV+QMGGLA+ADHCKERARERFKE+KK EH+ANG+FDRMKRRKKGDTSMTPRQKYLRRLRMNQDSAAAARHAQEVYVHVLEKLVKT+E +KK + +EL  L Q+N  LH+R+S +ET+V R   P    SF + A ++ YDPIQV KL+DMLTAPQTVSAEAADP+FA +CIQPA AV
Sbjct:    1 MDLLDFNLTANPIDDVQPAPQQPQPNAMRSLLNTNHPPSQQPGPMAWPTAADLPV-VQPSHAASSSSAPPVAAAATPFSVLPPQPLSSPQSHPSAXXLRPPGLTPDDDPPIDPHVVDQMGGLAFADHCKERARERFKELKKTEHIANGEFDRMKRRKKGDTSMTPRQKYLRRLRMNQDSAAAARHAQEVYVHVLEKLVKTTEDEKKKMRSELQQLHQQNAMLHSRLSHMETMVERQPLPSDPASFYEHARKQAYDPIQVTKLIDMLTAPQTVSAEAADPNFANDCIQPAHAV 291          
BLAST of Ggra2385.t1 vs. uniprot
Match: A0A1X6PBP3 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBP3_PORUM)

HSP 1 Score: 70.1 bits (170), Expect = 7.050e-10
Identity = 45/114 (39.47%), Postives = 60/114 (52.63%), Query Frame = 0
Query:  113 GLAYADHCKERARERFKEMKKNEHMANGDFDRMKRRKKGDTSMTPRQKYLRRLRMNQDSAAAARHAQEVYVHVLEKLVKTSEGDKKALMTELHSLRQENFNLHNRVSELETVVG 226
            GL  A   KE AR  +K     +    G  DR KRR+KGD S++   K+ RRL  NQDSAAAARHA +VYV  LE  V  ++ +   L   +     +N  L   + +L  +VG
Sbjct:  414 GLRRALAAKEHARSSYKAALAADMERRGQGDRFKRRRKGDASISAAAKHERRLLKNQDSAAAARHAHDVYVRTLEAGVAAADAEADRLRAAIGRAAADNAGLVGVIGQLRQLVG 527          
BLAST of Ggra2385.t1 vs. uniprot
Match: A0A1X6PKN1 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKN1_PORUM)

HSP 1 Score: 64.7 bits (156), Expect = 4.490e-8
Identity = 36/65 (55.38%), Postives = 45/65 (69.23%), Query Frame = 0
Query:  143 DRMKRRKKGDTSMTPRQKYLRRLRMNQDSAAAARHAQEVYVHVLEKLVKTSEGDKKALMTELHSL 207
            +R KRR+KGDTS+T  +K+ RRLR NQDSA AAR+AQEVYV  LE  V+  + D  A   E+  L
Sbjct:  410 ERFKRRRKGDTSLTEAEKHGRRLRKNQDSATAARYAQEVYVRSLEATVERGDADLAAARAEVGRL 474          
BLAST of Ggra2385.t1 vs. uniprot
Match: R7QV50 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QV50_CHOCR)

HSP 1 Score: 56.6 bits (135), Expect = 5.600e-7
Identity = 25/33 (75.76%), Postives = 28/33 (84.85%), Query Frame = 0
Query:  111 MGGLAYADHCKERARERFKEMKKNEHMANGDFD 143
            MGG+ YAD CKE+ RE FKEMKKNEHMA G+FD
Sbjct:    1 MGGIPYADLCKEKVREAFKEMKKNEHMAKGEFD 33          
The following BLAST results are available for this feature:
BLAST of Ggra2385.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IJV48.200e-10461.30BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A1X6PBP37.050e-1039.47Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6PKN14.490e-855.38Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7QV505.600e-775.76Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 190..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..104
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 156..220
e-value: 0.0024
score: 26.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:98428..99270 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2385.t1Ggra2385.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 98428..99270 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2385.t1 ID=Ggra2385.t1|Name=Ggra2385.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=281bp
MDLLDFSLAPNAVDDANQPSSSTQPAAMQNLLNANHNLPQQQLPWAAAAD
IPFSTNPAQQPQASSAPQASAAPSSSQPLAMQKRPHSQPLRPASFALDED
PSIDPHVVNQMGGLAYADHCKERARERFKEMKKNEHMANGDFDRMKRRKK
GDTSMTPRQKYLRRLRMNQDSAAAARHAQEVYVHVLEKLVKTSEGDKKAL
MTELHSLRQENFNLHNRVSELETVVGRPVAEPSFLDATRRPYDPIQVAKL
VDMLTAPQTVSAEAADPDFARECIQPARAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP