Ggra2379.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2379.t1
Unique NameGgra2379.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length348
Homology
BLAST of Ggra2379.t1 vs. uniprot
Match: A0A2V3J3H3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3H3_9FLOR)

HSP 1 Score: 344 bits (883), Expect = 2.400e-115
Identity = 165/275 (60.00%), Postives = 222/275 (80.73%), Query Frame = 0
Query:   69 LSLPLKEAGAVCGEPDPFFAHFLDWQEGYAAFEGREVHYRLIGSKKKEQKANKYPVVYLGDAGVAMGSGETLELLGGTDRRVLLVDQLGVGESKGLGAQQKYQWADVAADELSAVLLRSEIANKKAPT--RIHLVAVGFGIQVADVLLKRSNVERTGFQVASVVTEGWSLPRDIKNVSFSAMQGERVCAVEGADGGNIDLLRAIYGGTNWNPKGVLRDISALVPVMALQMKEWPSIDLQDTSIRKKELDGDGRIPHLAASDRSLGLMETFFDEVE 341
            +S PLK A A+CGEPDPFFAHFL+WQE +AA++ R+VHYRLIGSKKKEQKA KYPVVYLGDAGVA+ SGETLELLG TDRR+L  D LGVGES+   ++ + +W D+AA+E+SAVLL+S IA+ KA T  ++H+VAVGFGI+VADVLLKRS+ ERTG+QVASVV EGWS+P ++K+++F+ +QGE++CA EGA+GGNI++LR +Y    W P+  L+ +S +VPV+AL+M+  PSI  Q+T +R++ L G GR+PHL  ++  +  ++ F +EVE
Sbjct:    1 MSNPLKRAEALCGEPDPFFAHFLEWQEDFAAYDRRQVHYRLIGSKKKEQKAKKYPVVYLGDAGVALASGETLELLGKTDRRILFSDLLGVGESQAFNSKDQAEWVDLAANEVSAVLLKSGIADTKAKTVPKLHIVAVGFGIEVADVLLKRSSAERTGYQVASVVAEGWSVPGNMKSITFADIQGEKLCATEGAEGGNINILRTVYQSGEWQPREALKHVSEVVPVLALRMEVSPSIAFQNTRLREEVLRGGGRLPHLMQTEECMVEIDNFLEEVE 275          
BLAST of Ggra2379.t1 vs. uniprot
Match: A0A7S3XPS5 (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPS5_HETAK)

HSP 1 Score: 66.6 bits (161), Expect = 1.500e-8
Identity = 48/156 (30.77%), Postives = 85/156 (54.49%), Query Frame = 0
Query:   67 AALSLPLKEAGAVCGEPDPFFAHFLDWQEGYAAFEGREVHYRLIGSKKKEQKANKYPVVYL-GDAGVAMGSGETLELLGGTDRRVLLVDQLGVGESKGLGAQQKYQWADVAA-DELSAVLLRSEIANKKAPTRIHLVAVGFGIQVADVLLKRSNVE 220
            AA  +  + AGA CG+P P +A+ L++ +G   ++G +++ R++G +  E++  + P++ L G  G++    ETLE +  T RRV+L D LG G+S           +  +  D+L+ V+  SE+  K+     HL A G+   VA   LK+ + +
Sbjct:   65 AAAGMNNRPAGAWCGDPYPAWAYTLNFNDGVIPYQGSQLYIRVVGDEYYEKRVKRKPLIVLPGGPGLSHDYLETLEAVSQTQRRVVLFDPLGTGQSGPRPPAAASAGSPRSLLDQLNRVI--SELGLKE----YHLFAHGYSSVVALEKLKQLSTQ 214          
The following BLAST results are available for this feature:
BLAST of Ggra2379.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J3H32.400e-11560.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S3XPS51.500e-830.77Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820alpha/beta hydrolasecoord: 90..338
e-value: 1.5E-7
score: 33.0
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 88..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:86188..87231 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2379.t1Ggra2379.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 86188..87231 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2379.t1 ID=Ggra2379.t1|Name=Ggra2379.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=348bp
MCVVAEEYRKSESDSGLATLTWIPLTQCPTPHHHKPYHSNTLCCTREVDY
RSRQCSRRSVILSLAAAALSLPLKEAGAVCGEPDPFFAHFLDWQEGYAAF
EGREVHYRLIGSKKKEQKANKYPVVYLGDAGVAMGSGETLELLGGTDRRV
LLVDQLGVGESKGLGAQQKYQWADVAADELSAVLLRSEIANKKAPTRIHL
VAVGFGIQVADVLLKRSNVERTGFQVASVVTEGWSLPRDIKNVSFSAMQG
ERVCAVEGADGGNIDLLRAIYGGTNWNPKGVLRDISALVPVMALQMKEWP
SIDLQDTSIRKKELDGDGRIPHLAASDRSLGLMETFFDEVEGNESKD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase