Ggra2346.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2346.t1
Unique NameGgra2346.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length249
Homology
BLAST of Ggra2346.t1 vs. uniprot
Match: A0A2V3ISV1 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISV1_9FLOR)

HSP 1 Score: 132 bits (332), Expect = 2.470e-33
Identity = 66/157 (42.04%), Postives = 103/157 (65.61%), Query Frame = 0
Query:    1 MCTKSKCSVYTAADATIPSETIPFACHLPPDAGSCITFHHMIDTVEAALNAKVEASNSNNEALLHSVDAQNLVTELHAEDLLVNEELLTIDSIRHQLAPEEEHTILSNARVIKDSVTQSARDALNISLEAGEAYDWNLKTAEHAHSAIQAEKDAKNA 157
            MC ++KC++YTA +  IPSE++PF CHL PDAG C  F HM+DT++AA NA VEAS+SN+ A  ++ ++  LV +  ++   VNE L +I+  R +L+ EE   +  +A V++ S T++AR+AL +SL+A E        A+   +A + +K+AK A
Sbjct:   80 MCKRTKCAMYTAVENVIPSESVPFGCHLTPDAGQCTAFDHMLDTLDAAENALVEASHSNDAASAYTAESYQLVAKAQSDVSAVNEALRSIEPFRDELSDEETDELEKDAEVVRQSATEAAREALQVSLKAAEVNKERRLVADLKKTASKRDKEAKRA 236          
BLAST of Ggra2346.t1 vs. uniprot
Match: A0A2V3IH85 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH85_9FLOR)

HSP 1 Score: 126 bits (316), Expect = 4.710e-31
Identity = 72/204 (35.29%), Postives = 118/204 (57.84%), Query Frame = 0
Query:    1 MCTKSKCSVYTAADATIPSETIPFACHLPPDAGSCITFHHMIDTVEAALNAKVEASNSNNEALLHSVDAQNLVTELHAEDLLVNEELLTIDSIRHQLAPEEEHTILSNARVIKDSVTQSARDALNISLEAGEAYDWNLKTAEHAHSAIQAEKDAKNAEYQLEEHNSKAQKENRTCPVCKQLEQDIEKLTQLRKQDAVTAGNSAK 204
            MC +SKC++YTA +  IPSE+IPF CHL PDAG C TF H++DTVE+A NA V++ +++  A  ++  +  +   + A+   V++ L  I+  R  L+ EE   I  + +++ +S  ++AR+A  +S +A + +   L  AE    A QA+ +AK+AE +L+E+               +L+   EK T+ RK+    AG +AK
Sbjct:   79 MCKRSKCAMYTAVENAIPSESIPFRCHLTPDAGRCTTFDHVLDTVESAENAAVDSIHASEAATTYTAQSLEMAVMIQADVAAVSDTLKAIEPFRDGLSNEEIADIEQDTQIVVESAAEAAREASEVSKDAAKVFKNRLLAAEFKKEARQADMEAKHAEQKLKENKXXXXXXXXXXXXXNELKAASEKHTKNRKEWCSKAGEAAK 282          
BLAST of Ggra2346.t1 vs. uniprot
Match: A0A2V3IHC7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHC7_9FLOR)

HSP 1 Score: 117 bits (293), Expect = 1.210e-27
Identity = 77/241 (31.95%), Postives = 119/241 (49.38%), Query Frame = 0
Query:    1 MCTKSKCSVYTAADATIPSETIPFACHLPPDAGSCITFHHMIDTVEAALNAKVEASNSNNEALLHSVDAQNLVTELHAEDLLVNEELLTIDSIRHQLAPEEEHTILSNARVIKDSVTQSARDALNISLEAGEAYDWNLKTAEHAHSAIQAEKDAKNAEYQLEEHNSKAQKENRTCPVCKQLEQDIEKLTQLRKQDAVTAGNSAKKCTNKRDIAALVLNDIHESRVRCGVARAKVLSAIAKL 241
            MC +SKC+++TA +  IPSE IPF CHL PDAG C TF H++DT+EAA NA VEAS+SN+ A  ++ +A ++V +  A+   V+  L +I+  R +L+ EE   I                          E        A+    A + +K+A                E +TC  C  L+++ EK T  RK   V AG +A++  N R  A    N + ++  +   A+A++ S I ++
Sbjct:   80 MCERSKCAMFTAMENAIPSEDIPFGCHLTPDAGQCTTFAHIMDTLEAADNALVEASHSNDLASSYTSEAYHMVIKAQADISTVDAALKSIEPFRDELSDEETDAIEKXXXXXXXXXXXXXXXXXXXXXXXAEVNKERRVVADFKKKANKCDKEAXXXXXXXXXXXXXXXXEQKTCEECGALKEENEKQTDSRKDSCVKAGEAAQRARNGRSNANEGNNRVKQNCSKSAEAKARIESKIERI 320          
The following BLAST results are available for this feature:
BLAST of Ggra2346.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ISV12.470e-3342.04Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IH854.710e-3135.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IHC71.210e-2731.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 147..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000122_piloncontigtig00000122_pilon:400428..401174 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2346.t1Ggra2346.t1Gracilaria gracilis GNS1m malemRNAtig00000122_pilon 400428..401174 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2346.t1 ID=Ggra2346.t1|Name=Ggra2346.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=249bp
MCTKSKCSVYTAADATIPSETIPFACHLPPDAGSCITFHHMIDTVEAALN
AKVEASNSNNEALLHSVDAQNLVTELHAEDLLVNEELLTIDSIRHQLAPE
EEHTILSNARVIKDSVTQSARDALNISLEAGEAYDWNLKTAEHAHSAIQA
EKDAKNAEYQLEEHNSKAQKENRTCPVCKQLEQDIEKLTQLRKQDAVTAG
NSAKKCTNKRDIAALVLNDIHESRVRCGVARAKVLSAIAKLKTRLGLS*
back to top