Ggra2339.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2339.t1
Unique NameGgra2339.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length250
Homology
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BLAST of Ggra2339.t1 vs. uniprot
Match: A0A2V3ITU3 (L-ascorbate peroxidase 5, peroxisomal n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITU3_9FLOR)

HSP 1 Score: 234 bits (596), Expect = 5.840e-73
Identity = 126/183 (68.85%), Postives = 141/183 (77.05%), Query Frame = 0 
Query:   65 RLNPYLGREDAKDADPAGKSELFKPGASADDMRTAFEAAGLNGARDVVLFHGAIGSLTDIGQSRAEKLKAVAISDEDEELIEDRDDVTYGRVTSTKRGAVLVSSNVSQLTLGGEKFSNAYLVAILKAKDPSQLSQRDKAILGDKAMYAEAQKYAGSNAKFKNDVADLFQHISLLGSSYESLNL 247
            R+   LGRED+ +ADP  KS +FKPGASA++++ AF AAGL GARDVVLFHGAIGSL DIGQSR                      VTYG+VTS KRGAVLVSSNVSQLTLGG+KFSNAYL AI KAKDPS+LSQRD+AILGDKAM AE Q+YA +N+KF NDVADLFQ ISLLGSSYESL L
Sbjct:  131 RIVVQLGREDSSEADPEWKSGMFKPGASAEELKEAFNAAGLRGARDVVLFHGAIGSLNDIGQSRVXXXXXXXXXXXXXXXXXXXXXVTYGKVTSAKRGAVLVSSNVSQLTLGGQKFSNAYLAAIFKAKDPSRLSQRDQAILGDKAMLAEVQRYATNNSKFTNDVADLFQAISLLGSSYESLRL 313
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BLAST of Ggra2339.t1 vs. uniprot
Match: A0A1X6NKH8 (PEROXIDASE_4 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKH8_PORUM)

HSP 1 Score: 134 bits (338), Expect = 1.580e-34
Identity = 87/197 (44.16%), Postives = 117/197 (59.39%), Query Frame = 0 
Query:   65 RLNPYLGREDAKDADPAGKSELFKPGASADDMRTAFEAAGLNGARDVVLFHGAIGSLTDIGQSRAEKLKAVAISDEDEELIEDRDDVTYGRVTST----------KRGAVLVSSNVSQLTLGGE-KFSNAYLVAIL---KAKDPSQLSQRDKAILGDKAMYAEAQKYAGSNAKFKNDVADLFQHISLLGSSYESLNL 247
            R+   LGREDAK  DP   S  +    SA D+  +  ++ + GA++VVL+HGA+G L DIG SR     A+A   E+EE+    D +TYG   +           ++GAVLV+SNVS LTLGG+ KF N YL A+L   KA     LS RD+ +L D A  A  +KYAG+N  F ND A+ F+ +SL+GS YES+ L
Sbjct:  102 RIVIQLGREDAKVPDPEAASAKWADDGSAADLVASMASSSIGGAKEVVLWHGAVGVLGDIGASREAANAAMAGDAEEEEI----DAMTYGDSAADSGVGAIGVKKRKGAVLVNSNVSTLTLGGKVKFGNEYLKALLAADKAGKKGDLSVRDREVLADPACRAMVEKYAGNNKAFTNDFANAFERMSLVGSRYESVKL 294
The following BLAST results are available for this feature:
BLAST of Ggra2339.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITU35.840e-7368.85L-ascorbate peroxidase 5, peroxisomal n=1 Tax=Grac... [more]
A0A1X6NKH81.580e-3444.16PEROXIDASE_4 domain-containing protein n=1 Tax=Por... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.420.10Peroxidase, domain 2coord: 87..232
e-value: 3.8E-7
score: 31.7
NoneNo IPR availableGENE3D1.10.520.10coord: 69..239
e-value: 3.8E-7
score: 31.7
NoneNo IPR availablePIRSRPIRSR600823-3PIRSR600823-3coord: 69..236
e-value: 4.0E-7
score: 25.8
IPR002016Haem peroxidasePFAMPF00141peroxidasecoord: 70..219
e-value: 1.7E-7
score: 31.2
IPR010255Haem peroxidase superfamilySUPERFAMILY48113Heme-dependent peroxidasescoord: 64..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000122_piloncontigtig00000122_pilon:377393..378610 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2339.t1Ggra2339.t1Gracilaria gracilis GNS1m malemRNAtig00000122_pilon 377393..378610 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2339.t1 ID=Ggra2339.t1|Name=Ggra2339.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=250bp
MVPMLPQLSDAAVYIDTERFGDKELKVSAINKVKQNKRLTEDQMGAYALN
LNAKQIKSCKKLTKRLNPYLGREDAKDADPAGKSELFKPGASADDMRTAF
EAAGLNGARDVVLFHGAIGSLTDIGQSRAEKLKAVAISDEDEELIEDRDD
VTYGRVTSTKRGAVLVSSNVSQLTLGGEKFSNAYLVAILKAKDPSQLSQR
DKAILGDKAMYAEAQKYAGSNAKFKNDVADLFQHISLLGSSYESLNLQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002016Haem_peroxidase
IPR010255Haem_peroxidase_sf