Ggra2314.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2314.t1
Unique NameGgra2314.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length416
Homology
BLAST of Ggra2314.t1 vs. uniprot
Match: A0A2V3IRA7 (Deubiquitinating enzyme A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRA7_9FLOR)

HSP 1 Score: 512 bits (1319), Expect = 5.000e-178
Identity = 319/443 (72.01%), Postives = 342/443 (77.20%), Query Frame = 0
Query:    1 MRVRLDAQGRPRPPVP---HPSSAAPPQPLNXXXXXXXXXXXAPVVRPPPA---------------------HPXXXXXXLSA-AAPPALLDDERGSDSGASVATEGYNSEDEHPHARIDLPVRTQREREVAFVAQLAARGLRVVEMRPDGNCLFRALAHAVWNDAEKHASLRAAVMQYLLQERDYYSQFVAEDFVRYVRRKRRDGTHGNHLELQAAAELFGRPIEVYAYSSTPATVIEAWGAAATADTSATPEPIRLSFHRGSHYNALEPFNAPDKSAKRAAAEAAEHAAWRAAADARATEEEIERAVLALSLVEANREEHVAGSASSSAAAVPSSVLALINTGYSEESASEAYRVAGHGGLSEMVRYLTSDRFQSKRLSSVPQRRPRSSKSEYLPVPRGTFSAETRNEPTLD------RSFERSLTMDRDPDDSKSRTSEE 412
            MRVRLDAQGRPRPPV      SSA P  P + XXXXXXXXXX     P PA                       XXXXX LSA AAPP   DDER SDSG+S   EGYNSEDEHP AR +LP RTQRERE AFVAQLAARGLR++EMRPDGNCLFRALAHAVWNDAEKH +LRAAVMQYLLQERDY+SQFVAEDFVRYVRRK+RDGTHGNHLELQAAAELFGRPIEVYAYSSTPATVIEAWG+AA ADTS+T EPIRLSFHR SHYNALEPFN  DKSAKRAAAEAAE  AWR AADA ATE+EIERAV+ALSLVEA+R EHVAGSASSS AAVPSSVLALIN+GYSEESASEAYRVAGHGGLSEM+RYLT  RFQ ++ SS  QRR  + K+ +L      FSA   +E T         S E +LT D D DD  SRTSE+
Sbjct:    1 MRVRLDAQGRPRPPVSPVRQQSSATPQPPPDVXXXXXXXXXXXAASLPVPAPVSNPLXXXXXXXXXXXXXXXXXXXXXXPLSASAAPPTPADDERASDSGSSAHNEGYNSEDEHPAARPELPARTQREREAAFVAQLAARGLRIIEMRPDGNCLFRALAHAVWNDAEKHTALRAAVMQYLLQERDYFSQFVAEDFVRYVRRKKRDGTHGNHLELQAAAELFGRPIEVYAYSSTPATVIEAWGSAAAADTSSTSEPIRLSFHRRSHYNALEPFNGLDKSAKRAAAEAAEQLAWRTAADAHATEDEIERAVMALSLVEASRAEHVAGSASSSTAAVPSSVLALINSGYSEESASEAYRVAGHGGLSEMIRYLTKGRFQHEQPSSTRQRRASAEKNMHL------FSARVASESTQVANDLPYNSSETALTTDSDRDDCNSRTSED 437          
BLAST of Ggra2314.t1 vs. uniprot
Match: R7QKZ1 (Deubiquitinating enzyme A n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKZ1_CHOCR)

HSP 1 Score: 277 bits (708), Expect = 1.810e-87
Identity = 150/233 (64.38%), Postives = 179/233 (76.82%), Query Frame = 0
Query:  122 MRPDGNCLFRALAHAVWNDAEKHASLRAAVMQYLLQERDYYSQFVAEDFVRYVRRKRRDGTHGNHLELQAAAELFGRPIEVYAYSSTPATVIEAWGAAATADTSATPEPIRLSFHRGSHYNALEPFNAPDKSAKRAAAEAAEHAAWRAAADARATEEEIERAVLALSLVEANREEHVAGS-ASSSAAAVPSSVLALINTGYSEESASEAYRVAGHGGLSEMVRYLTSDRFQSK 353
            MR DGNCLFRALAHA+W DAE H  LRA V+ YL QERDY+SQFVAEDF RYVRRK RDGTHGNHLELQAAAELFG+PIEVY+Y  TP T+I++W   A  D++  PEP+RLSFHR SHYNA+EP     +  + A A+      WRA  DA+AT+ E+E+AV+ALSLVEA+R E  AGS ASSS   +PS+VLALI+ GY+EE A EAY+VAGHGGL  MV++LTS+ F  K
Sbjct:    1 MRADGNCLFRALAHALWGDAELHVPLRAKVIDYLSQERDYFSQFVAEDFARYVRRKSRDGTHGNHLELQAAAELFGKPIEVYSYGPTPVTIIDSWSMHAGEDSTRRPEPVRLSFHRRSHYNAVEPLAIAGEK-RIAQAKRERELQWRATLDAQATQNEMEKAVVALSLVEASRRESAAGSSASSSTPMLPSTVLALIHAGYTEERAKEAYQVAGHGGLGAMVQHLTSEFFSPK 232          
BLAST of Ggra2314.t1 vs. uniprot
Match: A0A7D9H7J8 (Deubiquitinating enzyme A (Fragment) n=1 Tax=Hydroscapha redfordi TaxID=931173 RepID=A0A7D9H7J8_9COLE)

HSP 1 Score: 145 bits (366), Expect = 2.860e-37
Identity = 79/167 (47.31%), Postives = 103/167 (61.68%), Query Frame = 0
Query:   82 GYNSEDEHPHARIDLPVRTQREREVAFVAQLAARGLRVVEMRPDGNCLFRALAHAVWNDAEKHASLRAAVMQYLLQERDYYSQFVAEDFVRYVRRKRRDGTHGNHLELQAAAELFGRPIEVYAYSSTPATVIEAWGAAATADTSATPEPIRLSFHRGSHYNAL-EPF 247
            GYNSEDE+ HA   L     R+R++ F   +  RG  +  M  DG CLFRA+A  V+ D   H+ +RA  M Y+L+ RDYY  +V EDF +YV RKR D  HGNHLE+QA +E++ R IEVY Y+  P   I  +GA       +  EPIRLS+HR SHYN++  PF
Sbjct:    6 GYNSEDEYCHAGDQLTDEEWRQRDLIFAKSIEKRGFIIKPMVEDGACLFRAIADQVYGDQNMHSVVRAHCMDYILKNRDYYCAYVTEDFNKYVNRKRHDFVHGNHLEIQALSEMYHRTIEVYCYALKP---INTFGA-----EKSDYEPIRLSYHRASHYNSITNPF 164          
BLAST of Ggra2314.t1 vs. uniprot
Match: L8HFI6 (Deubiquitinating enzyme A n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HFI6_ACACA)

HSP 1 Score: 144 bits (362), Expect = 6.510e-36
Identity = 97/249 (38.96%), Postives = 133/249 (53.41%), Query Frame = 0
Query:   63 PALLDDERGSDSGASVATEGYNSEDEHPHARIDLPVRTQREREVAFVAQLAARGLRVVEMRPDGNCLFRALAHAVWNDAEKHASLRAAVMQYLLQERDYYSQFVAEDFVRYVRRKRRDGTHGNHLELQAAAELFGRPIEVYAYSST-PATVIEAWGAAATADTSATPEPIRLSFHRGSHYNA--------------LEPFNAPDKSAKRAAAEAAEHAAWRAAADA---RATEEEIERAVLALSLVEAN 293
            PAL D +      ++   +GYNS+DE     +     T  E E AF   L   G ++  M  DGNCLFRA+A  V+ DAE H  +R+  M Y+ +ER++YSQFVAEDF  YVRRK+RD   GNHLE+QA +E++ RPIEVYAY    P  +         A       PIRLS+H G+HYN+              L   N P    +RA  ++ E   ++   +A    AT++++E  VL  S +EAN
Sbjct:   24 PALSDRDAKKPRKSAGGEDGYNSDDEGRQGAVADSHGTLPEDEGAFEEDLRRVGYQIKRMTGDGNCLFRAVADQVYGDAEMHDEVRSRCMDYMEKEREHYSQFVAEDFTEYVRRKKRDKVFGNHLEIQAISEIYNRPIEVYAYGHREPINIFHKHYFTEYA-------PIRLSYHWGNHYNSVIDPENPSVGVGLGLPQLNNPGLEMERAIEQSIEDTLYKDVVEASEWEATQKQLEEEVLRQSALEAN 265          
BLAST of Ggra2314.t1 vs. uniprot
Match: A0A085LYT7 (Deubiquitinating enzyme A n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085LYT7_9BILA)

HSP 1 Score: 144 bits (363), Expect = 5.090e-35
Identity = 80/179 (44.69%), Postives = 114/179 (63.69%), Query Frame = 0
Query:   74 SGASVATEGYNSEDEHPHARIDLPVRTQR-EREVAFVAQL-AARGLRVVEMRPDGNCLFRALAHAVWNDAEKHASLRAAVMQYLLQERDYYSQFVAEDFVRYVRRKRRDGTHGNHLELQAAAELFGRPIEVYAYSSTPATVIEAWGAAATADTSATPEPIRLSFHRGSHYNAL-EPFNA 249
            + ++ + EGYNSEDE   A  D PV  +  E E AF   L + +G  + +MR DG C+FRA+A  V+ D + H  +R   + Y+++  DY+SQFV EDF  YV RK ++  HGNH+ELQA AE++ RPIEVY Y++TP             ++SA+  PIRLS+HR SHYN++ +P+NA
Sbjct:  134 TSSAPSIEGYNSEDEL--AAADEPVAAEDLETEAAFENSLKSTKGFLIKKMRADGACMFRAVADQVYGDEDMHNMVRKLCINYMIKNADYFSQFVTEDFGEYVARKSQETAHGNHVELQAIAEMYNRPIEVYQYNTTPINTF-------FTNSSASAAPIRLSYHRSSHYNSVVDPYNA 303          
BLAST of Ggra2314.t1 vs. uniprot
Match: A0A4Y2FCL6 (Deubiquitinating enzyme A n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2FCL6_ARAVE)

HSP 1 Score: 144 bits (362), Expect = 2.160e-34
Identity = 76/176 (43.18%), Postives = 109/176 (61.93%), Query Frame = 0
Query:   75 GASVATEGYNSEDEHPHARIDLPVRTQREREVAFVAQLAARGLRVVEMRPDGNCLFRALAHAVWNDAEKHASLRAAVMQYLLQERDYYSQFVAEDFVRYVRRKRRDGTHGNHLELQAAAELFGRPIEVYAYSSTPATVIEAWGAAATADTSATPEPIRLSFHRGSHYNAL-EPFNA 249
            G      GYNS DE+  +   +     RE+E+ F A+L  +G  + +M  DG C+FRA+A  V+ D E H+++R   M Y+ +  DYYSQ+V EDF +Y++RKR D  HGNH+E+QA +E+F R IEVY YSS P  +    G+  T +     EPIRLS+HR  HYN++ +P+ A
Sbjct:  149 GQEEDPSGYNSGDEYDRSFDQMTEEELREKELMFEAKLRKKGYSIKKMGEDGACMFRAVADQVYGDQEMHSAIRKLCMDYMAKNSDYYSQYVTEDFDKYLQRKRSDHIHGNHIEMQAMSEMFNRHIEVYHYSSEPINIFH--GSQKTDN-----EPIRLSYHRNVHYNSIVDPYKA 317          
BLAST of Ggra2314.t1 vs. uniprot
Match: A0A7D9D3X9 (Deubiquitinating enzyme A (Fragment) n=1 Tax=Lepicerus sp. AD-2013 TaxID=1323565 RepID=A0A7D9D3X9_9COLE)

HSP 1 Score: 137 bits (346), Expect = 3.170e-34
Identity = 75/169 (44.38%), Postives = 98/169 (57.99%), Query Frame = 0
Query:   82 GYNSEDEHP-HARIDLPVRTQREREVAFVAQLAARGLRVVEMRPDGNCLFRALAHAVWNDAEKHASLRAAVMQYLLQERDYYSQFVAEDFVRYVRRKRRDGTHGNHLELQAAAELFGRPIEVYAYSSTPATVIEAWGAAATADTSATPEPIRLSFHRGSHYNAL-EPFN 248
            GYNSEDE+  H    L     R+R++ F   L   G  +  M  DG CLFRA+A  V+ D   H  +R   M Y+L+ RD+Y  ++ EDF +YV RKR D  HGNHLE+QA +E++ R IEVY Y   P  +  A          +  EPIRLS+HRGSHYN++  PFN
Sbjct:    6 GYNSEDEYSEHPSQQLTDEEWRQRDLIFARSLEKLGFIIKPMVEDGACLFRAIADQVYGDQNMHRIVRTHCMDYILKNRDFYCAYITEDFNKYVSRKRHDFVHGNHLEIQALSEMYHRSIEVYCYQLKPINIFGA--------LKSDYEPIRLSYHRGSHYNSITNPFN 166          
BLAST of Ggra2314.t1 vs. uniprot
Match: A0A5S6QY65 (Deubiquitinating enzyme A n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QY65_TRIMR)

HSP 1 Score: 141 bits (356), Expect = 4.690e-34
Identity = 85/195 (43.59%), Postives = 119/195 (61.03%), Query Frame = 0
Query:   63 PALLDDERGS-----DSGASVATEGYNSEDEHPHARIDLPVRTQR-EREVAFVAQL-AARGLRVVEMRPDGNCLFRALAHAVWNDAEKHASLRAAVMQYLLQERDYYSQFVAEDFVRYVRRKRRDGTHGNHLELQAAAELFGRPIEVYAYSSTPATVIEAWGAAATADTSATPEPIRLSFHRGSHYNA-LEPFNA 249
            PAL   +R S      + ++ + EGYNSEDE   A  D PV  +  E E AF   L + +G  + +MR DG C+FRA+A  V+ D + H  +R   + Y+++  DY+SQFV E+F  YV RK ++  HGNH+ELQA AE++ RPIEVY Y++TP        +A TA       PIRLS+HR SHYN+ ++P+NA
Sbjct:  114 PALRCKQRSSGHVVPSTSSAPSIEGYNSEDESVGA--DEPVAAEDLETETAFENSLKSTKGFLIKKMRADGACMFRAVADQVYGDEDMHNMVRKLCINYMIKNSDYFSQFVTENFSDYVARKSQETAHGNHVELQAIAEMYNRPIEVYQYNTTPINTFFTNSSAGTA-------PIRLSYHRSSHYNSVIDPYNA 299          
BLAST of Ggra2314.t1 vs. uniprot
Match: A0A6P7VZZ5 (Deubiquitinating enzyme A n=8 Tax=Ixodes TaxID=6944 RepID=A0A6P7VZZ5_IXOSC)

HSP 1 Score: 142 bits (358), Expect = 1.030e-33
Identity = 77/169 (45.56%), Postives = 98/169 (57.99%), Query Frame = 0
Query:   82 GYNSEDEHPHARIDLPVRTQREREVAFVAQLAARGLRVVEMRPDGNCLFRALAHAVWNDAEKHASLRAAVMQYLLQERDYYSQFVAEDFVRYVRRKRRDGTHGNHLELQAAAELFGRPIEVYAYSSTPATVIEAWGAAATADTSATPEPIRLSFHRGSHYNAL-EPFNA 249
            GYNS DE+            +ERE  F  +L  +GL +  M  DG CLFRA+A  V+ D E H  LR   M Y+ +  DYYSQ+V EDF +YV RKR D  HGNH+E+QA +E+F RPIEVY YSS P  +                EPIRLS+HR  HYN++ +P+ A
Sbjct:  145 GYNSGDEYDKPPELWTAEEFKEREYHFEKKLRKKGLMIKSMGEDGACLFRAVADQVYGDQEMHKVLRKLCMDYMAKNSDYYSQYVTEDFEKYVERKRSDHIHGNHIEMQALSEMFNRPIEVYHYSSEPINIFHGM-------QQTDNEPIRLSYHRNVHYNSIIDPYKA 306          
BLAST of Ggra2314.t1 vs. uniprot
Match: A0A2R5LG04 (Deubiquitinating enzyme A n=2 Tax=Ornithodoros TaxID=6937 RepID=A0A2R5LG04_9ACAR)

HSP 1 Score: 142 bits (358), Expect = 1.160e-33
Identity = 77/169 (45.56%), Postives = 100/169 (59.17%), Query Frame = 0
Query:   82 GYNSEDEHPHARIDLPVRTQREREVAFVAQLAARGLRVVEMRPDGNCLFRALAHAVWNDAEKHASLRAAVMQYLLQERDYYSQFVAEDFVRYVRRKRRDGTHGNHLELQAAAELFGRPIEVYAYSSTPATVIEAWGAAATADTSATPEPIRLSFHRGSHYNAL-EPFNA 249
            GYNS DE+            +ERE  F  +L  +GL +  M  DG CLFRA+A  V+ D E H +LR   M Y+ +  DYYSQ+V EDF +YV RKR D  HGNH+E+QA +E+F RPIEVY YS+ P  +             +  EPIRLS+HR  HYN++ +PF A
Sbjct:  147 GYNSGDEYDKPPELWTPEEYQEREYHFEKKLRKKGLMIKNMGEDGACLFRAVADQVYGDQEMHHALRKLCMDYMAKNSDYYSQYVTEDFEKYVERKRCDHIHGNHIEMQALSEMFNRPIEVYHYSAEPINIFHGM-------QKSDNEPIRLSYHRNVHYNSIVDPFKA 308          
The following BLAST results are available for this feature:
BLAST of Ggra2314.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRA75.000e-17872.01Deubiquitinating enzyme A n=1 Tax=Gracilariopsis c... [more]
R7QKZ11.810e-8764.38Deubiquitinating enzyme A n=1 Tax=Chondrus crispus... [more]
A0A7D9H7J82.860e-3747.31Deubiquitinating enzyme A (Fragment) n=1 Tax=Hydro... [more]
L8HFI66.510e-3638.96Deubiquitinating enzyme A n=1 Tax=Acanthamoeba cas... [more]
A0A085LYT75.090e-3544.69Deubiquitinating enzyme A n=1 Tax=Trichuris suis T... [more]
A0A4Y2FCL62.160e-3443.18Deubiquitinating enzyme A n=1 Tax=Araneus ventrico... [more]
A0A7D9D3X93.170e-3444.38Deubiquitinating enzyme A (Fragment) n=1 Tax=Lepic... [more]
A0A5S6QY654.690e-3443.59Deubiquitinating enzyme A n=1 Tax=Trichuris muris ... [more]
A0A6P7VZZ51.030e-3345.56Deubiquitinating enzyme A n=8 Tax=Ixodes TaxID=694... [more]
A0A2R5LG041.160e-3345.56Deubiquitinating enzyme A n=2 Tax=Ornithodoros Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 273..293
NoneNo IPR availableGENE3D3.90.70.80coord: 98..253
e-value: 1.6E-45
score: 156.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..415
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..415
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..98
NoneNo IPR availablePANTHERPTHR12419OTU DOMAIN CONTAINING PROTEINcoord: 57..317
IPR003323OTU domainPFAMPF02338OTUcoord: 123..241
e-value: 9.1E-16
score: 58.5
IPR003323OTU domainPROSITEPS50802OTUcoord: 117..247
score: 17.640236
IPR031084OTU domain-containing protein 5PANTHERPTHR12419:SF4OTU DOMAIN-CONTAINING PROTEIN 5coord: 57..317
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 101..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000122_piloncontigtig00000122_pilon:196936..198183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2314.t1Ggra2314.t1Gracilaria gracilis GNS1m malemRNAtig00000122_pilon 196936..198183 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2314.t1 ID=Ggra2314.t1|Name=Ggra2314.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=416bp
MRVRLDAQGRPRPPVPHPSSAAPPQPLNPVSPPSASAAPAPVVRPPPAHP
APPLRPLSAAAPPALLDDERGSDSGASVATEGYNSEDEHPHARIDLPVRT
QREREVAFVAQLAARGLRVVEMRPDGNCLFRALAHAVWNDAEKHASLRAA
VMQYLLQERDYYSQFVAEDFVRYVRRKRRDGTHGNHLELQAAAELFGRPI
EVYAYSSTPATVIEAWGAAATADTSATPEPIRLSFHRGSHYNALEPFNAP
DKSAKRAAAEAAEHAAWRAAADARATEEEIERAVLALSLVEANREEHVAG
SASSSAAAVPSSVLALINTGYSEESASEAYRVAGHGGLSEMVRYLTSDRF
QSKRLSSVPQRRPRSSKSEYLPVPRGTFSAETRNEPTLDRSFERSLTMDR
DPDDSKSRTSEEGGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003323OTU_dom
IPR031084OTU5
IPR038765Papain-like_cys_pep_sf